data_4M0L # _model_server_result.job_id 6AX6T0Oq2W-oBDUg7jxObQ _model_server_result.datetime_utc '2024-11-15 07:22:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m0l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":501}' # _entry.id 4M0L # _exptl.entry_id 4M0L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.63 _cell.angle_gamma 90 _cell.entry_id 4M0L _cell.length_a 86.05 _cell.length_b 106.55 _cell.length_c 156.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M0L _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,U 1 1 B,I,J,V 2 1 C,K,L,M,W 3 1 D,N,O,X 4 1 E,P,Q,R,Y 5 1 F,S,T,Z 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 I N N ? 2 K N N ? 2 N N N ? 2 P N N ? 2 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 59 1_555 A SG CYS 74 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? disulf ? disulf2 A SG CYS 62 A CYS 62 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 59 B CYS 59 1_555 B SG CYS 74 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 62 B CYS 62 1_555 B SG CYS 77 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 C SG CYS 59 C CYS 59 1_555 C SG CYS 74 C CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 C SG CYS 62 C CYS 62 1_555 C SG CYS 77 C CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 D SG CYS 59 D CYS 59 1_555 D SG CYS 74 D CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 D SG CYS 62 D CYS 62 1_555 D SG CYS 77 D CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 E SG CYS 59 E CYS 59 1_555 E SG CYS 74 E CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf10 E SG CYS 62 E CYS 62 1_555 E SG CYS 77 E CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf11 F SG CYS 59 F CYS 59 1_555 F SG CYS 74 F CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf12 F SG CYS 62 F CYS 62 1_555 F SG CYS 77 F CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc1 A OG1 THR 23 A THR 23 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc2 G O3B GDP . A GDP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc3 H MG MG . A MG 502 1_555 U O HOH . A HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc4 H MG MG . A MG 502 1_555 U O HOH . A HOH 644 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc5 H MG MG . A MG 502 1_555 U O HOH . A HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc6 H MG MG . A MG 502 1_555 U O HOH . A HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc7 B OG1 THR 23 B THR 23 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc8 I O3B GDP . B GDP 501 1_555 J MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc9 J MG MG . B MG 502 1_555 V O HOH . B HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc10 J MG MG . B MG 502 1_555 V O HOH . B HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc11 J MG MG . B MG 502 1_555 V O HOH . B HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc12 C OG1 THR 23 C THR 23 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc13 C OG1 THR 54 C THR 54 1_555 M MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc14 C O THR 70 C THR 70 1_555 M MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? metalc ? metalc15 C OE2 GLU 71 C GLU 71 1_555 M MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc16 K O1B GDP . C GDP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc17 L MG MG . C MG 502 1_555 W O HOH . C HOH 634 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc18 L MG MG . C MG 502 1_555 W O HOH . C HOH 643 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc19 L MG MG . C MG 502 1_555 W O HOH . C HOH 655 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc20 L MG MG . C MG 502 1_555 W O HOH . C HOH 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc21 M MG MG . C MG 503 1_555 W O HOH . C HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc22 M MG MG . C MG 503 1_555 W O HOH . C HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc23 D OG1 THR 23 D THR 23 1_555 O MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc24 N O1B GDP . D GDP 501 1_555 O MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc25 O MG MG . D MG 502 1_555 X O HOH . D HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc26 O MG MG . D MG 502 1_555 X O HOH . D HOH 631 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc27 O MG MG . D MG 502 1_555 X O HOH . D HOH 632 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc28 E OG1 THR 23 E THR 23 1_555 Q MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc29 P O2B GDP . E GDP 501 1_555 Q MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc30 P O2A GDP . E GDP 501 1_555 Q MG MG . E MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.953 ? metalc ? metalc31 Q MG MG . E MG 502 1_555 Y O HOH . E HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc32 Q MG MG . E MG 502 1_555 Y O HOH . E HOH 636 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc33 Q MG MG . E MG 502 1_555 Y O HOH . E HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc34 Q MG MG . E MG 502 1_555 Y O HOH . E HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc35 F OG1 THR 23 F THR 23 1_555 T MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc36 S O1B GDP . F GDP 501 1_555 T MG MG . F MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc37 T MG MG . F MG 502 1_555 Z O HOH . F HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc38 T MG MG . F MG 502 1_555 Z O HOH . F HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc39 T MG MG . F MG 502 1_555 Z O HOH . F HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 4M0L _atom_sites.fract_transf_matrix[1][1] 0.011621 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000128 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 GDP A 1 501 1 GDP GDP . H 3 MG A 1 502 6 MG MG . I 2 GDP B 1 501 2 GDP GDP . J 3 MG B 1 502 1 MG MG . K 2 GDP C 1 501 3 GDP GDP . L 3 MG C 1 502 2 MG MG . M 3 MG C 1 503 7 MG MG . N 2 GDP D 1 501 4 GDP GDP . O 3 MG D 1 502 3 MG MG . P 2 GDP E 1 501 5 GDP GDP . Q 3 MG E 1 502 4 MG MG . R 4 PO4 E 1 503 1 PO4 PO4 . S 2 GDP F 1 501 6 GDP GDP . T 3 MG F 1 502 5 MG MG . U 5 HOH A 1 601 1 HOH HOH . U 5 HOH A 2 602 3 HOH HOH . U 5 HOH A 3 603 4 HOH HOH . U 5 HOH A 4 604 7 HOH HOH . U 5 HOH A 5 605 11 HOH HOH . U 5 HOH A 6 606 14 HOH HOH . U 5 HOH A 7 607 15 HOH HOH . U 5 HOH A 8 608 21 HOH HOH . U 5 HOH A 9 609 32 HOH HOH . U 5 HOH A 10 610 33 HOH HOH . U 5 HOH A 11 611 34 HOH HOH . U 5 HOH A 12 612 35 HOH HOH . U 5 HOH A 13 613 37 HOH HOH . U 5 HOH A 14 614 39 HOH HOH . U 5 HOH A 15 615 52 HOH HOH . U 5 HOH A 16 616 55 HOH HOH . U 5 HOH A 17 617 57 HOH HOH . U 5 HOH A 18 618 61 HOH HOH . U 5 HOH A 19 619 66 HOH HOH . U 5 HOH A 20 620 67 HOH HOH . U 5 HOH A 21 621 71 HOH HOH . U 5 HOH A 22 622 72 HOH HOH . U 5 HOH A 23 623 77 HOH HOH . U 5 HOH A 24 624 80 HOH HOH . U 5 HOH A 25 625 90 HOH HOH . U 5 HOH A 26 626 94 HOH HOH . U 5 HOH A 27 627 95 HOH HOH . U 5 HOH A 28 628 102 HOH HOH . U 5 HOH A 29 629 107 HOH HOH . U 5 HOH A 30 630 110 HOH HOH . U 5 HOH A 31 631 112 HOH HOH . U 5 HOH A 32 632 121 HOH HOH . U 5 HOH A 33 633 127 HOH HOH . U 5 HOH A 34 634 132 HOH HOH . U 5 HOH A 35 635 136 HOH HOH . U 5 HOH A 36 636 146 HOH HOH . U 5 HOH A 37 637 154 HOH HOH . U 5 HOH A 38 638 162 HOH HOH . U 5 HOH A 39 639 163 HOH HOH . U 5 HOH A 40 640 170 HOH HOH . U 5 HOH A 41 641 186 HOH HOH . U 5 HOH A 42 642 196 HOH HOH . U 5 HOH A 43 643 213 HOH HOH . U 5 HOH A 44 644 225 HOH HOH . U 5 HOH A 45 645 226 HOH HOH . U 5 HOH A 46 646 227 HOH HOH . U 5 HOH A 47 647 249 HOH HOH . U 5 HOH A 48 648 250 HOH HOH . U 5 HOH A 49 649 251 HOH HOH . U 5 HOH A 50 650 257 HOH HOH . U 5 HOH A 51 651 259 HOH HOH . U 5 HOH A 52 652 264 HOH HOH . U 5 HOH A 53 653 265 HOH HOH . U 5 HOH A 54 654 266 HOH HOH . U 5 HOH A 55 655 267 HOH HOH . U 5 HOH A 56 656 268 HOH HOH . U 5 HOH A 57 657 272 HOH HOH . U 5 HOH A 58 658 276 HOH HOH . U 5 HOH A 59 659 297 HOH HOH . U 5 HOH A 60 660 303 HOH HOH . U 5 HOH A 61 661 307 HOH HOH . U 5 HOH A 62 662 311 HOH HOH . U 5 HOH A 63 663 312 HOH HOH . U 5 HOH A 64 664 327 HOH HOH . U 5 HOH A 65 665 331 HOH HOH . U 5 HOH A 66 666 336 HOH HOH . U 5 HOH A 67 667 340 HOH HOH . U 5 HOH A 68 668 345 HOH HOH . U 5 HOH A 69 669 359 HOH HOH . U 5 HOH A 70 670 363 HOH HOH . V 5 HOH B 1 601 17 HOH HOH . V 5 HOH B 2 602 20 HOH HOH . V 5 HOH B 3 603 24 HOH HOH . V 5 HOH B 4 604 28 HOH HOH . V 5 HOH B 5 605 43 HOH HOH . V 5 HOH B 6 606 45 HOH HOH . V 5 HOH B 7 607 47 HOH HOH . V 5 HOH B 8 608 48 HOH HOH . V 5 HOH B 9 609 50 HOH HOH . V 5 HOH B 10 610 51 HOH HOH . V 5 HOH B 11 611 53 HOH HOH . V 5 HOH B 12 612 62 HOH HOH . V 5 HOH B 13 613 64 HOH HOH . V 5 HOH B 14 614 65 HOH HOH . V 5 HOH B 15 615 69 HOH HOH . V 5 HOH B 16 616 84 HOH HOH . V 5 HOH B 17 617 87 HOH HOH . V 5 HOH B 18 618 93 HOH HOH . V 5 HOH B 19 619 105 HOH HOH . V 5 HOH B 20 620 109 HOH HOH . V 5 HOH B 21 621 114 HOH HOH . V 5 HOH B 22 622 120 HOH HOH . V 5 HOH B 23 623 123 HOH HOH . V 5 HOH B 24 624 124 HOH HOH . V 5 HOH B 25 625 130 HOH HOH . V 5 HOH B 26 626 134 HOH HOH . V 5 HOH B 27 627 139 HOH HOH . V 5 HOH B 28 628 140 HOH HOH . V 5 HOH B 29 629 142 HOH HOH . V 5 HOH B 30 630 143 HOH HOH . V 5 HOH B 31 631 148 HOH HOH . V 5 HOH B 32 632 149 HOH HOH . V 5 HOH B 33 633 157 HOH HOH . V 5 HOH B 34 634 159 HOH HOH . V 5 HOH B 35 635 169 HOH HOH . V 5 HOH B 36 636 172 HOH HOH . V 5 HOH B 37 637 174 HOH HOH . V 5 HOH B 38 638 183 HOH HOH . V 5 HOH B 39 639 188 HOH HOH . V 5 HOH B 40 640 189 HOH HOH . V 5 HOH B 41 641 201 HOH HOH . V 5 HOH B 42 642 211 HOH HOH . V 5 HOH B 43 643 217 HOH HOH . V 5 HOH B 44 644 224 HOH HOH . V 5 HOH B 45 645 228 HOH HOH . V 5 HOH B 46 646 244 HOH HOH . V 5 HOH B 47 647 245 HOH HOH . V 5 HOH B 48 648 248 HOH HOH . V 5 HOH B 49 649 252 HOH HOH . V 5 HOH B 50 650 255 HOH HOH . V 5 HOH B 51 651 278 HOH HOH . V 5 HOH B 52 652 281 HOH HOH . V 5 HOH B 53 653 286 HOH HOH . V 5 HOH B 54 654 287 HOH HOH . V 5 HOH B 55 655 288 HOH HOH . V 5 HOH B 56 656 289 HOH HOH . V 5 HOH B 57 657 290 HOH HOH . V 5 HOH B 58 658 299 HOH HOH . V 5 HOH B 59 659 300 HOH HOH . V 5 HOH B 60 660 313 HOH HOH . V 5 HOH B 61 661 315 HOH HOH . V 5 HOH B 62 662 321 HOH HOH . V 5 HOH B 63 663 323 HOH HOH . V 5 HOH B 64 664 328 HOH HOH . V 5 HOH B 65 665 329 HOH HOH . V 5 HOH B 66 666 333 HOH HOH . V 5 HOH B 67 667 338 HOH HOH . V 5 HOH B 68 668 339 HOH HOH . V 5 HOH B 69 669 341 HOH HOH . V 5 HOH B 70 670 342 HOH HOH . V 5 HOH B 71 671 347 HOH HOH . V 5 HOH B 72 672 350 HOH HOH . V 5 HOH B 73 673 352 HOH HOH . W 5 HOH C 1 601 2 HOH HOH . W 5 HOH C 2 602 6 HOH HOH . W 5 HOH C 3 603 8 HOH HOH . W 5 HOH C 4 604 9 HOH HOH . W 5 HOH C 5 605 10 HOH HOH . W 5 HOH C 6 606 12 HOH HOH . W 5 HOH C 7 607 13 HOH HOH . W 5 HOH C 8 608 16 HOH HOH . W 5 HOH C 9 609 18 HOH HOH . W 5 HOH C 10 610 19 HOH HOH . W 5 HOH C 11 611 22 HOH HOH . W 5 HOH C 12 612 26 HOH HOH . W 5 HOH C 13 613 27 HOH HOH . W 5 HOH C 14 614 29 HOH HOH . W 5 HOH C 15 615 30 HOH HOH . W 5 HOH C 16 616 31 HOH HOH . W 5 HOH C 17 617 36 HOH HOH . W 5 HOH C 18 618 41 HOH HOH . W 5 HOH C 19 619 46 HOH HOH . W 5 HOH C 20 620 49 HOH HOH . W 5 HOH C 21 621 56 HOH HOH . W 5 HOH C 22 622 58 HOH HOH . W 5 HOH C 23 623 60 HOH HOH . W 5 HOH C 24 624 70 HOH HOH . W 5 HOH C 25 625 82 HOH HOH . W 5 HOH C 26 626 86 HOH HOH . W 5 HOH C 27 627 88 HOH HOH . W 5 HOH C 28 628 89 HOH HOH . W 5 HOH C 29 629 92 HOH HOH . W 5 HOH C 30 630 96 HOH HOH . W 5 HOH C 31 631 99 HOH HOH . W 5 HOH C 32 632 108 HOH HOH . W 5 HOH C 33 633 119 HOH HOH . W 5 HOH C 34 634 128 HOH HOH . W 5 HOH C 35 635 135 HOH HOH . W 5 HOH C 36 636 144 HOH HOH . W 5 HOH C 37 637 147 HOH HOH . W 5 HOH C 38 638 152 HOH HOH . W 5 HOH C 39 639 160 HOH HOH . W 5 HOH C 40 640 161 HOH HOH . W 5 HOH C 41 641 164 HOH HOH . W 5 HOH C 42 642 171 HOH HOH . W 5 HOH C 43 643 177 HOH HOH . W 5 HOH C 44 644 178 HOH HOH . W 5 HOH C 45 645 179 HOH HOH . W 5 HOH C 46 646 181 HOH HOH . W 5 HOH C 47 647 198 HOH HOH . W 5 HOH C 48 648 199 HOH HOH . W 5 HOH C 49 649 208 HOH HOH . W 5 HOH C 50 650 209 HOH HOH . W 5 HOH C 51 651 212 HOH HOH . W 5 HOH C 52 652 214 HOH HOH . W 5 HOH C 53 653 221 HOH HOH . W 5 HOH C 54 654 222 HOH HOH . W 5 HOH C 55 655 229 HOH HOH . W 5 HOH C 56 656 230 HOH HOH . W 5 HOH C 57 657 238 HOH HOH . W 5 HOH C 58 658 242 HOH HOH . W 5 HOH C 59 659 243 HOH HOH . W 5 HOH C 60 660 254 HOH HOH . W 5 HOH C 61 661 262 HOH HOH . W 5 HOH C 62 662 263 HOH HOH . W 5 HOH C 63 663 277 HOH HOH . W 5 HOH C 64 664 285 HOH HOH . W 5 HOH C 65 665 291 HOH HOH . W 5 HOH C 66 666 298 HOH HOH . W 5 HOH C 67 667 301 HOH HOH . W 5 HOH C 68 668 302 HOH HOH . W 5 HOH C 69 669 304 HOH HOH . W 5 HOH C 70 670 310 HOH HOH . W 5 HOH C 71 671 322 HOH HOH . W 5 HOH C 72 672 334 HOH HOH . W 5 HOH C 73 673 343 HOH HOH . W 5 HOH C 74 674 348 HOH HOH . W 5 HOH C 75 675 356 HOH HOH . W 5 HOH C 76 676 357 HOH HOH . W 5 HOH C 77 677 358 HOH HOH . X 5 HOH D 1 601 40 HOH HOH . X 5 HOH D 2 602 44 HOH HOH . X 5 HOH D 3 603 59 HOH HOH . X 5 HOH D 4 604 63 HOH HOH . X 5 HOH D 5 605 68 HOH HOH . X 5 HOH D 6 606 75 HOH HOH . X 5 HOH D 7 607 76 HOH HOH . X 5 HOH D 8 608 78 HOH HOH . X 5 HOH D 9 609 79 HOH HOH . X 5 HOH D 10 610 81 HOH HOH . X 5 HOH D 11 611 85 HOH HOH . X 5 HOH D 12 612 104 HOH HOH . X 5 HOH D 13 613 111 HOH HOH . X 5 HOH D 14 614 113 HOH HOH . X 5 HOH D 15 615 116 HOH HOH . X 5 HOH D 16 616 117 HOH HOH . X 5 HOH D 17 617 122 HOH HOH . X 5 HOH D 18 618 133 HOH HOH . X 5 HOH D 19 619 145 HOH HOH . X 5 HOH D 20 620 151 HOH HOH . X 5 HOH D 21 621 156 HOH HOH . X 5 HOH D 22 622 158 HOH HOH . X 5 HOH D 23 623 166 HOH HOH . X 5 HOH D 24 624 180 HOH HOH . X 5 HOH D 25 625 190 HOH HOH . X 5 HOH D 26 626 192 HOH HOH . X 5 HOH D 27 627 205 HOH HOH . X 5 HOH D 28 628 216 HOH HOH . X 5 HOH D 29 629 220 HOH HOH . X 5 HOH D 30 630 223 HOH HOH . X 5 HOH D 31 631 231 HOH HOH . X 5 HOH D 32 632 232 HOH HOH . X 5 HOH D 33 633 237 HOH HOH . X 5 HOH D 34 634 239 HOH HOH . X 5 HOH D 35 635 240 HOH HOH . X 5 HOH D 36 636 241 HOH HOH . X 5 HOH D 37 637 246 HOH HOH . X 5 HOH D 38 638 247 HOH HOH . X 5 HOH D 39 639 253 HOH HOH . X 5 HOH D 40 640 256 HOH HOH . X 5 HOH D 41 641 258 HOH HOH . X 5 HOH D 42 642 269 HOH HOH . X 5 HOH D 43 643 270 HOH HOH . X 5 HOH D 44 644 271 HOH HOH . X 5 HOH D 45 645 274 HOH HOH . X 5 HOH D 46 646 275 HOH HOH . X 5 HOH D 47 647 280 HOH HOH . X 5 HOH D 48 648 283 HOH HOH . X 5 HOH D 49 649 284 HOH HOH . X 5 HOH D 50 650 292 HOH HOH . X 5 HOH D 51 651 294 HOH HOH . X 5 HOH D 52 652 295 HOH HOH . X 5 HOH D 53 653 296 HOH HOH . X 5 HOH D 54 654 305 HOH HOH . X 5 HOH D 55 655 306 HOH HOH . X 5 HOH D 56 656 308 HOH HOH . X 5 HOH D 57 657 309 HOH HOH . X 5 HOH D 58 658 314 HOH HOH . X 5 HOH D 59 659 319 HOH HOH . X 5 HOH D 60 660 320 HOH HOH . X 5 HOH D 61 661 330 HOH HOH . X 5 HOH D 62 662 332 HOH HOH . X 5 HOH D 63 663 349 HOH HOH . X 5 HOH D 64 664 354 HOH HOH . X 5 HOH D 65 665 355 HOH HOH . Y 5 HOH E 1 601 23 HOH HOH . Y 5 HOH E 2 602 25 HOH HOH . Y 5 HOH E 3 603 38 HOH HOH . Y 5 HOH E 4 604 42 HOH HOH . Y 5 HOH E 5 605 54 HOH HOH . Y 5 HOH E 6 606 73 HOH HOH . Y 5 HOH E 7 607 91 HOH HOH . Y 5 HOH E 8 608 97 HOH HOH . Y 5 HOH E 9 609 98 HOH HOH . Y 5 HOH E 10 610 100 HOH HOH . Y 5 HOH E 11 611 101 HOH HOH . Y 5 HOH E 12 612 115 HOH HOH . Y 5 HOH E 13 613 118 HOH HOH . Y 5 HOH E 14 614 125 HOH HOH . Y 5 HOH E 15 615 126 HOH HOH . Y 5 HOH E 16 616 137 HOH HOH . Y 5 HOH E 17 617 138 HOH HOH . Y 5 HOH E 18 618 141 HOH HOH . Y 5 HOH E 19 619 153 HOH HOH . Y 5 HOH E 20 620 165 HOH HOH . Y 5 HOH E 21 621 167 HOH HOH . Y 5 HOH E 22 622 168 HOH HOH . Y 5 HOH E 23 623 176 HOH HOH . Y 5 HOH E 24 624 187 HOH HOH . Y 5 HOH E 25 625 191 HOH HOH . Y 5 HOH E 26 626 193 HOH HOH . Y 5 HOH E 27 627 194 HOH HOH . Y 5 HOH E 28 628 200 HOH HOH . Y 5 HOH E 29 629 202 HOH HOH . Y 5 HOH E 30 630 203 HOH HOH . Y 5 HOH E 31 631 204 HOH HOH . Y 5 HOH E 32 632 207 HOH HOH . Y 5 HOH E 33 633 210 HOH HOH . Y 5 HOH E 34 634 215 HOH HOH . Y 5 HOH E 35 635 219 HOH HOH . Y 5 HOH E 36 636 233 HOH HOH . Y 5 HOH E 37 637 234 HOH HOH . Y 5 HOH E 38 638 235 HOH HOH . Y 5 HOH E 39 639 260 HOH HOH . Y 5 HOH E 40 640 261 HOH HOH . Y 5 HOH E 41 641 279 HOH HOH . Y 5 HOH E 42 642 316 HOH HOH . Y 5 HOH E 43 643 317 HOH HOH . Y 5 HOH E 44 644 318 HOH HOH . Y 5 HOH E 45 645 324 HOH HOH . Y 5 HOH E 46 646 325 HOH HOH . Y 5 HOH E 47 647 326 HOH HOH . Y 5 HOH E 48 648 337 HOH HOH . Y 5 HOH E 49 649 344 HOH HOH . Y 5 HOH E 50 650 346 HOH HOH . Y 5 HOH E 51 651 353 HOH HOH . Z 5 HOH F 1 601 5 HOH HOH . Z 5 HOH F 2 602 74 HOH HOH . Z 5 HOH F 3 603 83 HOH HOH . Z 5 HOH F 4 604 103 HOH HOH . Z 5 HOH F 5 605 106 HOH HOH . Z 5 HOH F 6 606 129 HOH HOH . Z 5 HOH F 7 607 131 HOH HOH . Z 5 HOH F 8 608 150 HOH HOH . Z 5 HOH F 9 609 155 HOH HOH . Z 5 HOH F 10 610 173 HOH HOH . Z 5 HOH F 11 611 175 HOH HOH . Z 5 HOH F 12 612 182 HOH HOH . Z 5 HOH F 13 613 184 HOH HOH . Z 5 HOH F 14 614 185 HOH HOH . Z 5 HOH F 15 615 195 HOH HOH . Z 5 HOH F 16 616 197 HOH HOH . Z 5 HOH F 17 617 206 HOH HOH . Z 5 HOH F 18 618 218 HOH HOH . Z 5 HOH F 19 619 236 HOH HOH . Z 5 HOH F 20 620 273 HOH HOH . Z 5 HOH F 21 621 282 HOH HOH . Z 5 HOH F 22 622 293 HOH HOH . Z 5 HOH F 23 623 335 HOH HOH . Z 5 HOH F 24 624 351 HOH HOH . Z 5 HOH F 25 625 360 HOH HOH . Z 5 HOH F 26 626 361 HOH HOH . Z 5 HOH F 27 627 362 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . P 2 -11.109 -6.92 -71.249 0.78 48.66 ? PB GDP 501 E 1 HETATM 2 O O1B GDP . . . P 2 -12.415 -6.497 -70.648 0.78 51.75 ? O1B GDP 501 E 1 HETATM 3 O O2B GDP . . . P 2 -10.622 -8.261 -70.781 0.78 50.51 ? O2B GDP 501 E 1 HETATM 4 O O3B GDP . . . P 2 -10.055 -5.854 -71.286 0.78 41.32 ? O3B GDP 501 E 1 HETATM 5 O O3A GDP . . . P 2 -11.496 -7.156 -72.778 0.78 55.53 ? O3A GDP 501 E 1 HETATM 6 P PA GDP . . . P 2 -12.62 -8.235 -73.137 0.78 56.01 ? PA GDP 501 E 1 HETATM 7 O O1A GDP . . . P 2 -11.935 -9.401 -73.789 0.78 52.2 ? O1A GDP 501 E 1 HETATM 8 O O2A GDP . . . P 2 -13.471 -8.446 -71.915 0.78 60.39 ? O2A GDP 501 E 1 HETATM 9 O O5' GDP . . . P 2 -13.493 -7.482 -74.241 0.78 46.76 ? O5' GDP 501 E 1 HETATM 10 C C5' GDP . . . P 2 -13.812 -8.186 -75.428 0.78 56.16 ? C5' GDP 501 E 1 HETATM 11 C C4' GDP . . . P 2 -14.861 -7.427 -76.215 0.78 62.33 ? C4' GDP 501 E 1 HETATM 12 O O4' GDP . . . P 2 -14.199 -6.662 -77.213 0.78 58.72 ? O4' GDP 501 E 1 HETATM 13 C C3' GDP . . . P 2 -15.74 -8.41 -76.952 0.78 63.47 ? C3' GDP 501 E 1 HETATM 14 O O3' GDP . . . P 2 -17.009 -7.811 -77.206 0.78 72.39 ? O3' GDP 501 E 1 HETATM 15 C C2' GDP . . . P 2 -15.025 -8.625 -78.26 0.78 58.71 ? C2' GDP 501 E 1 HETATM 16 O O2' GDP . . . P 2 -15.976 -8.779 -79.313 0.78 61.58 ? O2' GDP 501 E 1 HETATM 17 C C1' GDP . . . P 2 -14.205 -7.362 -78.454 0.78 57.85 ? C1' GDP 501 E 1 HETATM 18 N N9 GDP . . . P 2 -12.821 -7.711 -78.843 0.78 58.63 ? N9 GDP 501 E 1 HETATM 19 C C8 GDP . . . P 2 -11.893 -8.301 -78.075 0.78 56.71 ? C8 GDP 501 E 1 HETATM 20 N N7 GDP . . . P 2 -10.734 -8.467 -78.759 0.78 51.98 ? N7 GDP 501 E 1 HETATM 21 C C5 GDP . . . P 2 -10.917 -7.975 -79.994 0.78 52.52 ? C5 GDP 501 E 1 HETATM 22 C C6 GDP . . . P 2 -10.11 -7.83 -81.225 0.78 55.11 ? C6 GDP 501 E 1 HETATM 23 O O6 GDP . . . P 2 -8.928 -8.227 -81.278 0.78 49.39 ? O6 GDP 501 E 1 HETATM 24 N N1 GDP . . . P 2 -10.69 -7.257 -82.283 0.78 55.55 ? N1 GDP 501 E 1 HETATM 25 C C2 GDP . . . P 2 -11.959 -6.82 -82.26 0.78 51.41 ? C2 GDP 501 E 1 HETATM 26 N N2 GDP . . . P 2 -12.484 -6.253 -83.366 0.78 53.52 ? N2 GDP 501 E 1 HETATM 27 N N3 GDP . . . P 2 -12.751 -6.923 -81.174 0.78 58.62 ? N3 GDP 501 E 1 HETATM 28 C C4 GDP . . . P 2 -12.293 -7.479 -80.037 0.78 59.38 ? C4 GDP 501 E 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #