data_4M1T # _model_server_result.job_id IqfzWhYH8kqeZEdBBm5Tkg _model_server_result.datetime_utc '2024-10-15 16:20:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m1t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4M1T # _exptl.entry_id 4M1T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 395.301 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{1-[(2,4-dichlorophenoxy)acetyl]piperidin-4-yl}ethanesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.63 _cell.angle_gamma 90 _cell.entry_id 4M1T _cell.length_a 68.166 _cell.length_b 83.48 _cell.length_c 85.747 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M1T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,H 1 1 B,E,F,I 2 1 C,G,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 13 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 12 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id C16 _struct_conn.ptnr2_label_comp_id 21M _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id 21M _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.831 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H20 Cl2 N2 O4 S' _chem_comp.formula_weight 395.301 _chem_comp.id 21M _chem_comp.mon_nstd_flag . _chem_comp.name N-{1-[(2,4-dichlorophenoxy)acetyl]piperidin-4-yl}ethanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL2 C22 21M sing 1 n n C24 C22 21M doub 2 n y C24 C02 21M sing 3 n y C22 C05 21M sing 4 n y CL1 C02 21M sing 5 n n C02 C03 21M doub 6 n y C05 O06 21M sing 7 n n C05 C04 21M doub 8 n y O06 C07 21M sing 9 n n C03 C04 21M sing 10 n y C07 C08 21M sing 11 n n O21 C08 21M doub 12 n n C08 N09 21M sing 13 n n N09 C20 21M sing 14 n n N09 C10 21M sing 15 n n C20 C19 21M sing 16 n n C10 C11 21M sing 17 n n C19 C12 21M sing 18 n n C11 C12 21M sing 19 n n C12 N13 21M sing 20 n n N13 S14 21M sing 21 n n S14 O17 21M doub 22 n n S14 C15 21M sing 23 n n S14 O18 21M doub 24 n n C16 C15 21M sing 25 n n C03 H031 21M sing 26 n n C04 H041 21M sing 27 n n C07 H072 21M sing 28 n n C07 H071 21M sing 29 n n C10 H101 21M sing 30 n n C10 H102 21M sing 31 n n C11 H111 21M sing 32 n n C11 H112 21M sing 33 n n C12 H121 21M sing 34 n n N13 H131 21M sing 35 n n C15 H151 21M sing 36 n n C15 H152 21M sing 37 n n C16 H162 21M sing 38 n n C16 H161 21M sing 39 n n C16 H1 21M sing 40 n n C19 H192 21M sing 41 n n C19 H191 21M sing 42 n n C20 H202 21M sing 43 n n C20 H201 21M sing 44 n n C24 H241 21M sing 45 n n # _atom_sites.entry_id 4M1T _atom_sites.fract_transf_matrix[1][1] 0.01467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005523 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012461 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GDP A 1 201 220 GDP GDP . E 3 21M B 1 201 210 21M 31A . F 2 GDP B 1 202 220 GDP GDP . G 2 GDP C 1 201 220 GDP GDP . H 4 HOH A 1 301 1 HOH HOH . H 4 HOH A 2 302 2 HOH HOH . H 4 HOH A 3 303 3 HOH HOH . H 4 HOH A 4 304 5 HOH HOH . H 4 HOH A 5 305 8 HOH HOH . H 4 HOH A 6 306 9 HOH HOH . H 4 HOH A 7 307 11 HOH HOH . H 4 HOH A 8 308 14 HOH HOH . H 4 HOH A 9 309 15 HOH HOH . H 4 HOH A 10 310 20 HOH HOH . H 4 HOH A 11 311 24 HOH HOH . H 4 HOH A 12 312 25 HOH HOH . H 4 HOH A 13 313 33 HOH HOH . H 4 HOH A 14 314 34 HOH HOH . H 4 HOH A 15 315 37 HOH HOH . H 4 HOH A 16 316 38 HOH HOH . H 4 HOH A 17 317 39 HOH HOH . H 4 HOH A 18 318 40 HOH HOH . H 4 HOH A 19 319 41 HOH HOH . H 4 HOH A 20 320 45 HOH HOH . H 4 HOH A 21 321 50 HOH HOH . H 4 HOH A 22 322 52 HOH HOH . H 4 HOH A 23 323 55 HOH HOH . H 4 HOH A 24 324 57 HOH HOH . H 4 HOH A 25 325 58 HOH HOH . H 4 HOH A 26 326 60 HOH HOH . H 4 HOH A 27 327 64 HOH HOH . H 4 HOH A 28 328 68 HOH HOH . H 4 HOH A 29 329 70 HOH HOH . H 4 HOH A 30 330 71 HOH HOH . H 4 HOH A 31 331 72 HOH HOH . H 4 HOH A 32 332 73 HOH HOH . H 4 HOH A 33 333 74 HOH HOH . H 4 HOH A 34 334 77 HOH HOH . H 4 HOH A 35 335 78 HOH HOH . H 4 HOH A 36 336 81 HOH HOH . H 4 HOH A 37 337 82 HOH HOH . H 4 HOH A 38 338 88 HOH HOH . H 4 HOH A 39 339 92 HOH HOH . H 4 HOH A 40 340 93 HOH HOH . H 4 HOH A 41 341 98 HOH HOH . H 4 HOH A 42 342 100 HOH HOH . H 4 HOH A 43 343 101 HOH HOH . H 4 HOH A 44 344 106 HOH HOH . H 4 HOH A 45 345 107 HOH HOH . H 4 HOH A 46 346 108 HOH HOH . H 4 HOH A 47 347 110 HOH HOH . H 4 HOH A 48 348 113 HOH HOH . H 4 HOH A 49 349 116 HOH HOH . H 4 HOH A 50 350 118 HOH HOH . H 4 HOH A 51 351 120 HOH HOH . H 4 HOH A 52 352 121 HOH HOH . H 4 HOH A 53 353 124 HOH HOH . H 4 HOH A 54 354 126 HOH HOH . H 4 HOH A 55 355 127 HOH HOH . H 4 HOH A 56 356 128 HOH HOH . H 4 HOH A 57 357 129 HOH HOH . H 4 HOH A 58 358 132 HOH HOH . H 4 HOH A 59 359 133 HOH HOH . H 4 HOH A 60 360 134 HOH HOH . H 4 HOH A 61 361 138 HOH HOH . H 4 HOH A 62 362 139 HOH HOH . H 4 HOH A 63 363 140 HOH HOH . H 4 HOH A 64 364 142 HOH HOH . H 4 HOH A 65 365 143 HOH HOH . H 4 HOH A 66 366 147 HOH HOH . H 4 HOH A 67 367 154 HOH HOH . H 4 HOH A 68 368 156 HOH HOH . H 4 HOH A 69 369 159 HOH HOH . H 4 HOH A 70 370 162 HOH HOH . H 4 HOH A 71 371 163 HOH HOH . I 4 HOH B 1 301 6 HOH HOH . I 4 HOH B 2 302 10 HOH HOH . I 4 HOH B 3 303 12 HOH HOH . I 4 HOH B 4 304 13 HOH HOH . I 4 HOH B 5 305 16 HOH HOH . I 4 HOH B 6 306 19 HOH HOH . I 4 HOH B 7 307 21 HOH HOH . I 4 HOH B 8 308 26 HOH HOH . I 4 HOH B 9 309 27 HOH HOH . I 4 HOH B 10 310 30 HOH HOH . I 4 HOH B 11 311 31 HOH HOH . I 4 HOH B 12 312 35 HOH HOH . I 4 HOH B 13 313 36 HOH HOH . I 4 HOH B 14 314 42 HOH HOH . I 4 HOH B 15 315 43 HOH HOH . I 4 HOH B 16 316 46 HOH HOH . I 4 HOH B 17 317 49 HOH HOH . I 4 HOH B 18 318 54 HOH HOH . I 4 HOH B 19 319 56 HOH HOH . I 4 HOH B 20 320 59 HOH HOH . I 4 HOH B 21 321 61 HOH HOH . I 4 HOH B 22 322 67 HOH HOH . I 4 HOH B 23 323 69 HOH HOH . I 4 HOH B 24 324 75 HOH HOH . I 4 HOH B 25 325 80 HOH HOH . I 4 HOH B 26 326 84 HOH HOH . I 4 HOH B 27 327 86 HOH HOH . I 4 HOH B 28 328 87 HOH HOH . I 4 HOH B 29 329 89 HOH HOH . I 4 HOH B 30 330 91 HOH HOH . I 4 HOH B 31 331 103 HOH HOH . I 4 HOH B 32 332 111 HOH HOH . I 4 HOH B 33 333 112 HOH HOH . I 4 HOH B 34 334 114 HOH HOH . I 4 HOH B 35 335 115 HOH HOH . I 4 HOH B 36 336 122 HOH HOH . I 4 HOH B 37 337 125 HOH HOH . I 4 HOH B 38 338 135 HOH HOH . I 4 HOH B 39 339 136 HOH HOH . I 4 HOH B 40 340 137 HOH HOH . I 4 HOH B 41 341 148 HOH HOH . I 4 HOH B 42 342 149 HOH HOH . I 4 HOH B 43 343 150 HOH HOH . I 4 HOH B 44 344 152 HOH HOH . I 4 HOH B 45 345 155 HOH HOH . I 4 HOH B 46 346 157 HOH HOH . I 4 HOH B 47 347 158 HOH HOH . I 4 HOH B 48 348 160 HOH HOH . I 4 HOH B 49 349 161 HOH HOH . J 4 HOH C 1 301 4 HOH HOH . J 4 HOH C 2 302 7 HOH HOH . J 4 HOH C 3 303 17 HOH HOH . J 4 HOH C 4 304 18 HOH HOH . J 4 HOH C 5 305 22 HOH HOH . J 4 HOH C 6 306 23 HOH HOH . J 4 HOH C 7 307 28 HOH HOH . J 4 HOH C 8 308 29 HOH HOH . J 4 HOH C 9 309 32 HOH HOH . J 4 HOH C 10 310 44 HOH HOH . J 4 HOH C 11 311 47 HOH HOH . J 4 HOH C 12 312 48 HOH HOH . J 4 HOH C 13 313 51 HOH HOH . J 4 HOH C 14 314 53 HOH HOH . J 4 HOH C 15 315 62 HOH HOH . J 4 HOH C 16 316 63 HOH HOH . J 4 HOH C 17 317 65 HOH HOH . J 4 HOH C 18 318 66 HOH HOH . J 4 HOH C 19 319 76 HOH HOH . J 4 HOH C 20 320 79 HOH HOH . J 4 HOH C 21 321 83 HOH HOH . J 4 HOH C 22 322 85 HOH HOH . J 4 HOH C 23 323 90 HOH HOH . J 4 HOH C 24 324 94 HOH HOH . J 4 HOH C 25 325 95 HOH HOH . J 4 HOH C 26 326 96 HOH HOH . J 4 HOH C 27 327 97 HOH HOH . J 4 HOH C 28 328 99 HOH HOH . J 4 HOH C 29 329 102 HOH HOH . J 4 HOH C 30 330 104 HOH HOH . J 4 HOH C 31 331 105 HOH HOH . J 4 HOH C 32 332 109 HOH HOH . J 4 HOH C 33 333 117 HOH HOH . J 4 HOH C 34 334 119 HOH HOH . J 4 HOH C 35 335 123 HOH HOH . J 4 HOH C 36 336 130 HOH HOH . J 4 HOH C 37 337 131 HOH HOH . J 4 HOH C 38 338 141 HOH HOH . J 4 HOH C 39 339 144 HOH HOH . J 4 HOH C 40 340 145 HOH HOH . J 4 HOH C 41 341 146 HOH HOH . J 4 HOH C 42 342 151 HOH HOH . J 4 HOH C 43 343 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 21M . . . E 3 4.243 11.687 18.907 1 38.34 ? CL1 21M 201 B 1 HETATM 2 CL CL2 21M . . . E 3 5.926 7.049 16.696 1 69.7 ? CL2 21M 201 B 1 HETATM 3 C C02 21M . . . E 3 5.14 10.272 18.994 1 40.26 ? C02 21M 201 B 1 HETATM 4 C C03 21M . . . E 3 5.884 9.998 20.156 1 40.64 ? C03 21M 201 B 1 HETATM 5 C C04 21M . . . E 3 6.629 8.834 20.239 1 48.78 ? C04 21M 201 B 1 HETATM 6 C C05 21M . . . E 3 6.644 7.903 19.15 1 45.52 ? C05 21M 201 B 1 HETATM 7 O O06 21M . . . E 3 7.413 6.689 19.212 1 57.12 ? O06 21M 201 B 1 HETATM 8 C C07 21M . . . E 3 8.035 6.326 20.383 1 44.36 ? C07 21M 201 B 1 HETATM 9 C C08 21M . . . E 3 7.105 5.758 21.432 1 59.71 ? C08 21M 201 B 1 HETATM 10 N N09 21M . . . E 3 7.549 5.472 22.784 1 35 ? N09 21M 201 B 1 HETATM 11 C C10 21M . . . E 3 6.687 4.963 23.814 1 41.65 ? C10 21M 201 B 1 HETATM 12 C C11 21M . . . E 3 6.655 5.918 24.974 1 36.48 ? C11 21M 201 B 1 HETATM 13 C C12 21M . . . E 3 8.018 6.34 25.446 1 32.38 ? C12 21M 201 B 1 HETATM 14 N N13 21M . . . E 3 7.97 7.495 26.36 1 44.77 ? N13 21M 201 B 1 HETATM 15 S S14 21M . . . E 3 7.854 7.051 27.953 1 46.85 ? S14 21M 201 B 1 HETATM 16 C C15 21M . . . E 3 9.395 6.642 28.668 1 33.4 ? C15 21M 201 B 1 HETATM 17 C C16 21M . . . E 3 10.632 7.486 28.313 1 42.53 ? C16 21M 201 B 1 HETATM 18 O O17 21M . . . E 3 6.863 5.961 28.129 1 46.12 ? O17 21M 201 B 1 HETATM 19 O O18 21M . . . E 3 7.211 8.141 28.726 1 72.53 ? O18 21M 201 B 1 HETATM 20 C C19 21M . . . E 3 8.91 6.722 24.326 1 28.27 ? C19 21M 201 B 1 HETATM 21 C C20 21M . . . E 3 8.903 5.689 23.263 1 32.69 ? C20 21M 201 B 1 HETATM 22 O O21 21M . . . E 3 5.882 5.542 21.089 1 45.06 ? O21 21M 201 B 1 HETATM 23 C C22 21M . . . E 3 5.902 8.171 17.999 1 61.68 ? C22 21M 201 B 1 HETATM 24 C C24 21M . . . E 3 5.147 9.353 17.909 1 52.38 ? C24 21M 201 B 1 HETATM 25 H H031 21M . . . E 3 5.881 10.636 20.909 1 48.77 ? H031 21M 201 B 1 HETATM 26 H H041 21M . . . E 3 7.161 8.641 21.062 1 58.54 ? H041 21M 201 B 1 HETATM 27 H H072 21M . . . E 3 8.724 5.695 20.178 1 53.23 ? H072 21M 201 B 1 HETATM 28 H H071 21M . . . E 3 8.426 7.076 20.742 1 53.23 ? H071 21M 201 B 1 HETATM 29 H H101 21M . . . E 3 5.74 4.869 23.443 1 49.98 ? H101 21M 201 B 1 HETATM 30 H H102 21M . . . E 3 6.999 4.139 24.091 1 49.98 ? H102 21M 201 B 1 HETATM 31 H H111 21M . . . E 3 6.133 6.716 24.703 1 43.78 ? H111 21M 201 B 1 HETATM 32 H H112 21M . . . E 3 6.156 5.489 25.713 1 43.78 ? H112 21M 201 B 1 HETATM 33 H H121 21M . . . E 3 8.199 5.496 25.603 1 38.86 ? H121 21M 201 B 1 HETATM 34 H H131 21M . . . E 3 7.237 8.064 26.125 1 53.73 ? H131 21M 201 B 1 HETATM 35 H H151 21M . . . E 3 9.609 5.646 28.422 1 40.08 ? H151 21M 201 B 1 HETATM 36 H H152 21M . . . E 3 9.287 6.691 29.585 1 40.08 ? H152 21M 201 B 1 HETATM 37 H H162 21M . . . E 3 10.602 7.729 27.335 1 51.04 ? H162 21M 201 B 1 HETATM 38 H H161 21M . . . E 3 10.614 8.351 28.873 1 51.04 ? H161 21M 201 B 1 HETATM 39 H H192 21M . . . E 3 8.603 7.548 23.958 1 33.92 ? H192 21M 201 B 1 HETATM 40 H H191 21M . . . E 3 9.814 6.842 24.654 1 33.92 ? H191 21M 201 B 1 HETATM 41 H H202 21M . . . E 3 9.516 6.023 22.465 1 39.23 ? H202 21M 201 B 1 HETATM 42 H H201 21M . . . E 3 9.248 4.885 23.608 1 39.23 ? H201 21M 201 B 1 HETATM 43 H H241 21M . . . E 3 4.615 9.547 17.084 1 62.86 ? H241 21M 201 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 43 #