data_4M1W # _model_server_result.job_id w5Eajl78H7U6OaIHfiuY4w _model_server_result.datetime_utc '2024-11-05 08:09:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m1w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":202}' # _entry.id 4M1W # _exptl.entry_id 4M1W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.06 _cell.angle_gamma 90 _cell.entry_id 4M1W _cell.length_a 68.095 _cell.length_b 83.817 _cell.length_c 87.238 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M1W _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,K 1 1 B,G,H,L 2 1 C,I,J,M 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 E C25 21R . A 21R 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? covale ? covale2 B SG CYS 13 B CYS 12 1_555 G C25 21R . B 21R 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? covale ? covale3 C SG CYS 13 C CYS 12 1_555 I C25 21R . C 21R 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 D MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc2 D MG MG . A MG 201 1_555 F O1B GDP . A GDP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.565 ? metalc ? metalc3 D MG MG . A MG 201 1_555 F O2B GDP . A GDP 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc4 D MG MG . A MG 201 1_555 K O HOH . A HOH 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc5 D MG MG . A MG 201 1_555 K O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc6 D MG MG . A MG 201 1_555 K O HOH . A HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 135 n n PB O2B GDP sing 136 n n PB O3B GDP sing 137 n n PB O3A GDP sing 138 n n O2B HOB2 GDP sing 139 n n O3B HOB3 GDP sing 140 n n O3A PA GDP sing 141 n n PA O1A GDP doub 142 n n PA O2A GDP sing 143 n n PA O5' GDP sing 144 n n O2A HOA2 GDP sing 145 n n O5' C5' GDP sing 146 n n C5' C4' GDP sing 147 n n C5' H5' GDP sing 148 n n C5' "H5''" GDP sing 149 n n C4' O4' GDP sing 150 n n C4' C3' GDP sing 151 n n C4' H4' GDP sing 152 n n O4' C1' GDP sing 153 n n C3' O3' GDP sing 154 n n C3' C2' GDP sing 155 n n C3' H3' GDP sing 156 n n O3' HO3' GDP sing 157 n n C2' O2' GDP sing 158 n n C2' C1' GDP sing 159 n n C2' H2' GDP sing 160 n n O2' HO2' GDP sing 161 n n C1' N9 GDP sing 162 n n C1' H1' GDP sing 163 n n N9 C8 GDP sing 164 n y N9 C4 GDP sing 165 n y C8 N7 GDP doub 166 n y C8 H8 GDP sing 167 n n N7 C5 GDP sing 168 n y C5 C6 GDP sing 169 n n C5 C4 GDP doub 170 n y C6 O6 GDP doub 171 n n C6 N1 GDP sing 172 n n N1 C2 GDP sing 173 n n N1 HN1 GDP sing 174 n n C2 N2 GDP sing 175 n n C2 N3 GDP doub 176 n n N2 HN21 GDP sing 177 n n N2 HN22 GDP sing 178 n n N3 C4 GDP sing 179 n n # _atom_sites.entry_id 4M1W _atom_sites.fract_transf_matrix[1][1] 0.014685 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005653 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011931 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 201 200 MG MG . E 3 21R A 1 202 210 21R LIG . F 4 GDP A 1 203 220 GDP GDP . G 3 21R B 1 201 210 21R LIG . H 4 GDP B 1 202 220 GDP GDP . I 3 21R C 1 201 210 21R LIG . J 4 GDP C 1 202 220 GDP GDP . K 5 HOH A 1 301 2 HOH HOH . K 5 HOH A 2 302 3 HOH HOH . K 5 HOH A 3 303 6 HOH HOH . K 5 HOH A 4 304 7 HOH HOH . K 5 HOH A 5 305 9 HOH HOH . K 5 HOH A 6 306 14 HOH HOH . K 5 HOH A 7 307 15 HOH HOH . K 5 HOH A 8 308 17 HOH HOH . K 5 HOH A 9 309 21 HOH HOH . K 5 HOH A 10 310 23 HOH HOH . K 5 HOH A 11 311 25 HOH HOH . K 5 HOH A 12 312 28 HOH HOH . K 5 HOH A 13 313 29 HOH HOH . K 5 HOH A 14 314 36 HOH HOH . K 5 HOH A 15 315 37 HOH HOH . K 5 HOH A 16 316 38 HOH HOH . K 5 HOH A 17 317 41 HOH HOH . K 5 HOH A 18 318 43 HOH HOH . K 5 HOH A 19 319 46 HOH HOH . K 5 HOH A 20 320 47 HOH HOH . K 5 HOH A 21 321 48 HOH HOH . K 5 HOH A 22 322 49 HOH HOH . K 5 HOH A 23 323 53 HOH HOH . K 5 HOH A 24 324 54 HOH HOH . K 5 HOH A 25 325 58 HOH HOH . K 5 HOH A 26 326 60 HOH HOH . K 5 HOH A 27 327 61 HOH HOH . K 5 HOH A 28 328 62 HOH HOH . K 5 HOH A 29 329 63 HOH HOH . K 5 HOH A 30 330 70 HOH HOH . K 5 HOH A 31 331 74 HOH HOH . K 5 HOH A 32 332 78 HOH HOH . K 5 HOH A 33 333 80 HOH HOH . K 5 HOH A 34 334 81 HOH HOH . K 5 HOH A 35 335 87 HOH HOH . K 5 HOH A 36 336 88 HOH HOH . K 5 HOH A 37 337 90 HOH HOH . K 5 HOH A 38 338 94 HOH HOH . K 5 HOH A 39 339 101 HOH HOH . K 5 HOH A 40 340 104 HOH HOH . K 5 HOH A 41 341 105 HOH HOH . K 5 HOH A 42 342 106 HOH HOH . K 5 HOH A 43 343 109 HOH HOH . K 5 HOH A 44 344 112 HOH HOH . K 5 HOH A 45 345 113 HOH HOH . K 5 HOH A 46 346 119 HOH HOH . K 5 HOH A 47 347 120 HOH HOH . K 5 HOH A 48 348 123 HOH HOH . K 5 HOH A 49 349 125 HOH HOH . K 5 HOH A 50 350 126 HOH HOH . K 5 HOH A 51 351 127 HOH HOH . K 5 HOH A 52 352 128 HOH HOH . K 5 HOH A 53 353 131 HOH HOH . K 5 HOH A 54 354 133 HOH HOH . K 5 HOH A 55 355 134 HOH HOH . K 5 HOH A 56 356 135 HOH HOH . K 5 HOH A 57 357 136 HOH HOH . K 5 HOH A 58 358 139 HOH HOH . K 5 HOH A 59 359 140 HOH HOH . K 5 HOH A 60 360 141 HOH HOH . K 5 HOH A 61 361 144 HOH HOH . K 5 HOH A 62 362 145 HOH HOH . K 5 HOH A 63 363 154 HOH HOH . K 5 HOH A 64 364 155 HOH HOH . K 5 HOH A 65 365 158 HOH HOH . K 5 HOH A 66 366 163 HOH HOH . K 5 HOH A 67 367 164 HOH HOH . K 5 HOH A 68 368 171 HOH HOH . K 5 HOH A 69 369 172 HOH HOH . K 5 HOH A 70 370 176 HOH HOH . K 5 HOH A 71 371 179 HOH HOH . K 5 HOH A 72 372 181 HOH HOH . K 5 HOH A 73 373 184 HOH HOH . K 5 HOH A 74 374 186 HOH HOH . K 5 HOH A 75 375 189 HOH HOH . K 5 HOH A 76 376 190 HOH HOH . K 5 HOH A 77 377 191 HOH HOH . K 5 HOH A 78 378 198 HOH HOH . K 5 HOH A 79 379 200 HOH HOH . K 5 HOH A 80 380 202 HOH HOH . K 5 HOH A 81 381 203 HOH HOH . K 5 HOH A 82 382 204 HOH HOH . K 5 HOH A 83 383 205 HOH HOH . K 5 HOH A 84 384 211 HOH HOH . K 5 HOH A 85 385 214 HOH HOH . K 5 HOH A 86 386 216 HOH HOH . K 5 HOH A 87 387 220 HOH HOH . K 5 HOH A 88 388 222 HOH HOH . K 5 HOH A 89 389 224 HOH HOH . K 5 HOH A 90 390 225 HOH HOH . K 5 HOH A 91 391 228 HOH HOH . K 5 HOH A 92 392 237 HOH HOH . K 5 HOH A 93 393 239 HOH HOH . K 5 HOH A 94 394 241 HOH HOH . K 5 HOH A 95 395 243 HOH HOH . K 5 HOH A 96 396 247 HOH HOH . K 5 HOH A 97 397 250 HOH HOH . K 5 HOH A 98 398 253 HOH HOH . K 5 HOH A 99 399 254 HOH HOH . K 5 HOH A 100 400 255 HOH HOH . K 5 HOH A 101 401 257 HOH HOH . K 5 HOH A 102 402 262 HOH HOH . K 5 HOH A 103 403 263 HOH HOH . K 5 HOH A 104 404 270 HOH HOH . K 5 HOH A 105 405 274 HOH HOH . K 5 HOH A 106 406 278 HOH HOH . K 5 HOH A 107 407 279 HOH HOH . K 5 HOH A 108 408 281 HOH HOH . K 5 HOH A 109 409 284 HOH HOH . K 5 HOH A 110 410 286 HOH HOH . K 5 HOH A 111 411 288 HOH HOH . K 5 HOH A 112 412 291 HOH HOH . K 5 HOH A 113 413 294 HOH HOH . K 5 HOH A 114 414 295 HOH HOH . K 5 HOH A 115 415 299 HOH HOH . K 5 HOH A 116 416 304 HOH HOH . K 5 HOH A 117 417 307 HOH HOH . K 5 HOH A 118 418 310 HOH HOH . K 5 HOH A 119 419 311 HOH HOH . L 5 HOH B 1 301 1 HOH HOH . L 5 HOH B 2 302 4 HOH HOH . L 5 HOH B 3 303 5 HOH HOH . L 5 HOH B 4 304 10 HOH HOH . L 5 HOH B 5 305 11 HOH HOH . L 5 HOH B 6 306 13 HOH HOH . L 5 HOH B 7 307 16 HOH HOH . L 5 HOH B 8 308 18 HOH HOH . L 5 HOH B 9 309 19 HOH HOH . L 5 HOH B 10 310 20 HOH HOH . L 5 HOH B 11 311 22 HOH HOH . L 5 HOH B 12 312 26 HOH HOH . L 5 HOH B 13 313 27 HOH HOH . L 5 HOH B 14 314 31 HOH HOH . L 5 HOH B 15 315 32 HOH HOH . L 5 HOH B 16 316 33 HOH HOH . L 5 HOH B 17 317 34 HOH HOH . L 5 HOH B 18 318 35 HOH HOH . L 5 HOH B 19 319 39 HOH HOH . L 5 HOH B 20 320 40 HOH HOH . L 5 HOH B 21 321 42 HOH HOH . L 5 HOH B 22 322 50 HOH HOH . L 5 HOH B 23 323 51 HOH HOH . L 5 HOH B 24 324 55 HOH HOH . L 5 HOH B 25 325 56 HOH HOH . L 5 HOH B 26 326 57 HOH HOH . L 5 HOH B 27 327 59 HOH HOH . L 5 HOH B 28 328 64 HOH HOH . L 5 HOH B 29 329 65 HOH HOH . L 5 HOH B 30 330 66 HOH HOH . L 5 HOH B 31 331 67 HOH HOH . L 5 HOH B 32 332 68 HOH HOH . L 5 HOH B 33 333 69 HOH HOH . L 5 HOH B 34 334 75 HOH HOH . L 5 HOH B 35 335 76 HOH HOH . L 5 HOH B 36 336 77 HOH HOH . L 5 HOH B 37 337 79 HOH HOH . L 5 HOH B 38 338 82 HOH HOH . L 5 HOH B 39 339 83 HOH HOH . L 5 HOH B 40 340 84 HOH HOH . L 5 HOH B 41 341 85 HOH HOH . L 5 HOH B 42 342 86 HOH HOH . L 5 HOH B 43 343 89 HOH HOH . L 5 HOH B 44 344 91 HOH HOH . L 5 HOH B 45 345 93 HOH HOH . L 5 HOH B 46 346 95 HOH HOH . L 5 HOH B 47 347 96 HOH HOH . L 5 HOH B 48 348 97 HOH HOH . L 5 HOH B 49 349 99 HOH HOH . L 5 HOH B 50 350 100 HOH HOH . L 5 HOH B 51 351 102 HOH HOH . L 5 HOH B 52 352 103 HOH HOH . L 5 HOH B 53 353 108 HOH HOH . L 5 HOH B 54 354 111 HOH HOH . L 5 HOH B 55 355 114 HOH HOH . L 5 HOH B 56 356 116 HOH HOH . L 5 HOH B 57 357 117 HOH HOH . L 5 HOH B 58 358 118 HOH HOH . L 5 HOH B 59 359 121 HOH HOH . L 5 HOH B 60 360 122 HOH HOH . L 5 HOH B 61 361 124 HOH HOH . L 5 HOH B 62 362 129 HOH HOH . L 5 HOH B 63 363 130 HOH HOH . L 5 HOH B 64 364 142 HOH HOH . L 5 HOH B 65 365 146 HOH HOH . L 5 HOH B 66 366 148 HOH HOH . L 5 HOH B 67 367 149 HOH HOH . L 5 HOH B 68 368 150 HOH HOH . L 5 HOH B 69 369 151 HOH HOH . L 5 HOH B 70 370 153 HOH HOH . L 5 HOH B 71 371 156 HOH HOH . L 5 HOH B 72 372 160 HOH HOH . L 5 HOH B 73 373 162 HOH HOH . L 5 HOH B 74 374 165 HOH HOH . L 5 HOH B 75 375 166 HOH HOH . L 5 HOH B 76 376 168 HOH HOH . L 5 HOH B 77 377 169 HOH HOH . L 5 HOH B 78 378 173 HOH HOH . L 5 HOH B 79 379 175 HOH HOH . L 5 HOH B 80 380 177 HOH HOH . L 5 HOH B 81 381 178 HOH HOH . L 5 HOH B 82 382 182 HOH HOH . L 5 HOH B 83 383 183 HOH HOH . L 5 HOH B 84 384 185 HOH HOH . L 5 HOH B 85 385 187 HOH HOH . L 5 HOH B 86 386 193 HOH HOH . L 5 HOH B 87 387 195 HOH HOH . L 5 HOH B 88 388 196 HOH HOH . L 5 HOH B 89 389 197 HOH HOH . L 5 HOH B 90 390 199 HOH HOH . L 5 HOH B 91 391 201 HOH HOH . L 5 HOH B 92 392 206 HOH HOH . L 5 HOH B 93 393 209 HOH HOH . L 5 HOH B 94 394 210 HOH HOH . L 5 HOH B 95 395 212 HOH HOH . L 5 HOH B 96 396 213 HOH HOH . L 5 HOH B 97 397 215 HOH HOH . L 5 HOH B 98 398 218 HOH HOH . L 5 HOH B 99 399 219 HOH HOH . L 5 HOH B 100 400 221 HOH HOH . L 5 HOH B 101 401 223 HOH HOH . L 5 HOH B 102 402 226 HOH HOH . L 5 HOH B 103 403 229 HOH HOH . L 5 HOH B 104 404 231 HOH HOH . L 5 HOH B 105 405 232 HOH HOH . L 5 HOH B 106 406 233 HOH HOH . L 5 HOH B 107 407 235 HOH HOH . L 5 HOH B 108 408 240 HOH HOH . L 5 HOH B 109 409 242 HOH HOH . L 5 HOH B 110 410 245 HOH HOH . L 5 HOH B 111 411 248 HOH HOH . L 5 HOH B 112 412 251 HOH HOH . L 5 HOH B 113 413 258 HOH HOH . L 5 HOH B 114 414 259 HOH HOH . L 5 HOH B 115 415 260 HOH HOH . L 5 HOH B 116 416 264 HOH HOH . L 5 HOH B 117 417 267 HOH HOH . L 5 HOH B 118 418 268 HOH HOH . L 5 HOH B 119 419 271 HOH HOH . L 5 HOH B 120 420 272 HOH HOH . L 5 HOH B 121 421 275 HOH HOH . L 5 HOH B 122 422 276 HOH HOH . L 5 HOH B 123 423 277 HOH HOH . L 5 HOH B 124 424 280 HOH HOH . L 5 HOH B 125 425 282 HOH HOH . L 5 HOH B 126 426 283 HOH HOH . L 5 HOH B 127 427 287 HOH HOH . L 5 HOH B 128 428 289 HOH HOH . L 5 HOH B 129 429 296 HOH HOH . L 5 HOH B 130 430 298 HOH HOH . L 5 HOH B 131 431 300 HOH HOH . L 5 HOH B 132 432 302 HOH HOH . L 5 HOH B 133 433 303 HOH HOH . L 5 HOH B 134 434 306 HOH HOH . M 5 HOH C 1 301 8 HOH HOH . M 5 HOH C 2 302 12 HOH HOH . M 5 HOH C 3 303 24 HOH HOH . M 5 HOH C 4 304 30 HOH HOH . M 5 HOH C 5 305 44 HOH HOH . M 5 HOH C 6 306 45 HOH HOH . M 5 HOH C 7 307 52 HOH HOH . M 5 HOH C 8 308 71 HOH HOH . M 5 HOH C 9 309 72 HOH HOH . M 5 HOH C 10 310 73 HOH HOH . M 5 HOH C 11 311 92 HOH HOH . M 5 HOH C 12 312 98 HOH HOH . M 5 HOH C 13 313 107 HOH HOH . M 5 HOH C 14 314 110 HOH HOH . M 5 HOH C 15 315 115 HOH HOH . M 5 HOH C 16 316 132 HOH HOH . M 5 HOH C 17 317 137 HOH HOH . M 5 HOH C 18 318 138 HOH HOH . M 5 HOH C 19 319 143 HOH HOH . M 5 HOH C 20 320 147 HOH HOH . M 5 HOH C 21 321 152 HOH HOH . M 5 HOH C 22 322 157 HOH HOH . M 5 HOH C 23 323 159 HOH HOH . M 5 HOH C 24 324 161 HOH HOH . M 5 HOH C 25 325 167 HOH HOH . M 5 HOH C 26 326 170 HOH HOH . M 5 HOH C 27 327 174 HOH HOH . M 5 HOH C 28 328 180 HOH HOH . M 5 HOH C 29 329 188 HOH HOH . M 5 HOH C 30 330 192 HOH HOH . M 5 HOH C 31 331 194 HOH HOH . M 5 HOH C 32 332 207 HOH HOH . M 5 HOH C 33 333 208 HOH HOH . M 5 HOH C 34 334 217 HOH HOH . M 5 HOH C 35 335 227 HOH HOH . M 5 HOH C 36 336 230 HOH HOH . M 5 HOH C 37 337 234 HOH HOH . M 5 HOH C 38 338 236 HOH HOH . M 5 HOH C 39 339 238 HOH HOH . M 5 HOH C 40 340 244 HOH HOH . M 5 HOH C 41 341 246 HOH HOH . M 5 HOH C 42 342 249 HOH HOH . M 5 HOH C 43 343 252 HOH HOH . M 5 HOH C 44 344 256 HOH HOH . M 5 HOH C 45 345 261 HOH HOH . M 5 HOH C 46 346 265 HOH HOH . M 5 HOH C 47 347 266 HOH HOH . M 5 HOH C 48 348 269 HOH HOH . M 5 HOH C 49 349 273 HOH HOH . M 5 HOH C 50 350 285 HOH HOH . M 5 HOH C 51 351 290 HOH HOH . M 5 HOH C 52 352 292 HOH HOH . M 5 HOH C 53 353 293 HOH HOH . M 5 HOH C 54 354 297 HOH HOH . M 5 HOH C 55 355 301 HOH HOH . M 5 HOH C 56 356 305 HOH HOH . M 5 HOH C 57 357 308 HOH HOH . M 5 HOH C 58 358 309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . J 4 -9.408 29.504 38.388 1 25.15 ? PB GDP 202 C 1 HETATM 2 O O1B GDP . . . J 4 -8.532 30.466 37.584 1 22.83 ? O1B GDP 202 C 1 HETATM 3 O O2B GDP . . . J 4 -10.766 30.133 38.456 1 24.24 ? O2B GDP 202 C 1 HETATM 4 O O3B GDP . . . J 4 -8.867 29.253 39.783 1 27.24 ? O3B GDP 202 C 1 HETATM 5 O O3A GDP . . . J 4 -9.528 28.137 37.567 1 25.64 ? O3A GDP 202 C 1 HETATM 6 P PA GDP . . . J 4 -9.173 26.665 38.101 1 29.01 ? PA GDP 202 C 1 HETATM 7 O O1A GDP . . . J 4 -7.787 26.529 38.669 1 27.92 ? O1A GDP 202 C 1 HETATM 8 O O2A GDP . . . J 4 -10.263 26.206 39.048 1 36.74 ? O2A GDP 202 C 1 HETATM 9 O O5' GDP . . . J 4 -9.266 25.831 36.733 1 26.42 ? O5' GDP 202 C 1 HETATM 10 C C5' GDP . . . J 4 -10.512 25.847 36.031 1 30.48 ? C5' GDP 202 C 1 HETATM 11 C C4' GDP . . . J 4 -10.596 24.583 35.191 1 33.77 ? C4' GDP 202 C 1 HETATM 12 O O4' GDP . . . J 4 -9.533 24.597 34.245 1 28.35 ? O4' GDP 202 C 1 HETATM 13 C C3' GDP . . . J 4 -10.432 23.317 36.021 1 31.45 ? C3' GDP 202 C 1 HETATM 14 O O3' GDP . . . J 4 -11.315 22.302 35.525 1 39.62 ? O3' GDP 202 C 1 HETATM 15 C C2' GDP . . . J 4 -8.998 22.907 35.814 1 35.8 ? C2' GDP 202 C 1 HETATM 16 O O2' GDP . . . J 4 -8.776 21.494 35.911 1 37.99 ? O2' GDP 202 C 1 HETATM 17 C C1' GDP . . . J 4 -8.732 23.436 34.415 1 30.19 ? C1' GDP 202 C 1 HETATM 18 N N9 GDP . . . J 4 -7.313 23.769 34.254 1 26.05 ? N9 GDP 202 C 1 HETATM 19 C C8 GDP . . . J 4 -6.568 24.59 35.025 1 26.2 ? C8 GDP 202 C 1 HETATM 20 N N7 GDP . . . J 4 -5.301 24.629 34.554 1 25.72 ? N7 GDP 202 C 1 HETATM 21 C C5 GDP . . . J 4 -5.237 23.837 33.462 1 24.52 ? C5 GDP 202 C 1 HETATM 22 C C6 GDP . . . J 4 -4.22 23.427 32.483 1 28.49 ? C6 GDP 202 C 1 HETATM 23 O O6 GDP . . . J 4 -3.043 23.848 32.545 1 26.18 ? O6 GDP 202 C 1 HETATM 24 N N1 GDP . . . J 4 -4.61 22.58 31.52 1 28.66 ? N1 GDP 202 C 1 HETATM 25 C C2 GDP . . . J 4 -5.856 22.099 31.409 1 26.02 ? C2 GDP 202 C 1 HETATM 26 N N2 GDP . . . J 4 -6.153 21.25 30.395 1 32.23 ? N2 GDP 202 C 1 HETATM 27 N N3 GDP . . . J 4 -6.832 22.433 32.259 1 27.03 ? N3 GDP 202 C 1 HETATM 28 C C4 GDP . . . J 4 -6.578 23.276 33.281 1 25.31 ? C4 GDP 202 C 1 HETATM 29 H H4' GDP . . . J 4 -11.565 24.555 34.675 1 40.53 ? H4' GDP 202 C 1 HETATM 30 H H3' GDP . . . J 4 -10.618 23.531 37.083 1 37.74 ? H3' GDP 202 C 1 HETATM 31 H HO3' GDP . . . J 4 -11.211 21.499 36.052 1 47.54 ? HO3' GDP 202 C 1 HETATM 32 H H2' GDP . . . J 4 -8.361 23.445 36.53 1 42.97 ? H2' GDP 202 C 1 HETATM 33 H HO2' GDP . . . J 4 -9.014 21.19 36.797 1 45.58 ? HO2' GDP 202 C 1 HETATM 34 H H1' GDP . . . J 4 -9.023 22.669 33.684 1 36.23 ? H1' GDP 202 C 1 HETATM 35 H H8 GDP . . . J 4 -6.926 25.123 35.896 1 31.44 ? H8 GDP 202 C 1 HETATM 36 H HN1 GDP . . . J 4 -3.905 22.28 30.817 1 34.39 ? HN1 GDP 202 C 1 HETATM 37 H HN21 GDP . . . J 4 -5.437 20.983 29.735 1 38.68 ? HN21 GDP 202 C 1 HETATM 38 H HN22 GDP . . . J 4 -7.089 20.883 30.302 1 38.68 ? HN22 GDP 202 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #