data_4M1Y # _model_server_result.job_id zcFRg4tOsHrEnlJLSStjLg _model_server_result.datetime_utc '2024-10-18 17:27:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 4M1Y # _exptl.entry_id 4M1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.88 _cell.angle_gamma 90 _cell.entry_id 4M1Y _cell.length_a 68.121 _cell.length_b 83.54 _cell.length_c 86.224 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,H 1 1 B,E,F,I 2 1 C,G,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 G N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 13 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 12 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id C14 _struct_conn.ptnr2_label_comp_id 21S _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id 21S _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.83 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 131 n n PB O2B GDP sing 132 n n PB O3B GDP sing 133 n n PB O3A GDP sing 134 n n O2B HOB2 GDP sing 135 n n O3B HOB3 GDP sing 136 n n O3A PA GDP sing 137 n n PA O1A GDP doub 138 n n PA O2A GDP sing 139 n n PA O5' GDP sing 140 n n O2A HOA2 GDP sing 141 n n O5' C5' GDP sing 142 n n C5' C4' GDP sing 143 n n C5' H5' GDP sing 144 n n C5' "H5''" GDP sing 145 n n C4' O4' GDP sing 146 n n C4' C3' GDP sing 147 n n C4' H4' GDP sing 148 n n O4' C1' GDP sing 149 n n C3' O3' GDP sing 150 n n C3' C2' GDP sing 151 n n C3' H3' GDP sing 152 n n O3' HO3' GDP sing 153 n n C2' O2' GDP sing 154 n n C2' C1' GDP sing 155 n n C2' H2' GDP sing 156 n n O2' HO2' GDP sing 157 n n C1' N9 GDP sing 158 n n C1' H1' GDP sing 159 n n N9 C8 GDP sing 160 n y N9 C4 GDP sing 161 n y C8 N7 GDP doub 162 n y C8 H8 GDP sing 163 n n N7 C5 GDP sing 164 n y C5 C6 GDP sing 165 n n C5 C4 GDP doub 166 n y C6 O6 GDP doub 167 n n C6 N1 GDP sing 168 n n N1 C2 GDP sing 169 n n N1 HN1 GDP sing 170 n n C2 N2 GDP sing 171 n n C2 N3 GDP doub 172 n n N2 HN21 GDP sing 173 n n N2 HN22 GDP sing 174 n n N3 C4 GDP sing 175 n n # _atom_sites.entry_id 4M1Y _atom_sites.fract_transf_matrix[1][1] 0.01468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0056 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GDP A 1 201 220 GDP GDP . E 3 21S B 1 201 210 21S LIG . F 2 GDP B 1 202 220 GDP GDP . G 2 GDP C 1 201 220 GDP GDP . H 4 HOH A 1 301 1 HOH HOH . H 4 HOH A 2 302 4 HOH HOH . H 4 HOH A 3 303 6 HOH HOH . H 4 HOH A 4 304 9 HOH HOH . H 4 HOH A 5 305 10 HOH HOH . H 4 HOH A 6 306 13 HOH HOH . H 4 HOH A 7 307 15 HOH HOH . H 4 HOH A 8 308 18 HOH HOH . H 4 HOH A 9 309 19 HOH HOH . H 4 HOH A 10 310 23 HOH HOH . H 4 HOH A 11 311 27 HOH HOH . H 4 HOH A 12 312 29 HOH HOH . H 4 HOH A 13 313 30 HOH HOH . H 4 HOH A 14 314 32 HOH HOH . H 4 HOH A 15 315 33 HOH HOH . H 4 HOH A 16 316 34 HOH HOH . H 4 HOH A 17 317 35 HOH HOH . H 4 HOH A 18 318 36 HOH HOH . H 4 HOH A 19 319 39 HOH HOH . H 4 HOH A 20 320 40 HOH HOH . H 4 HOH A 21 321 43 HOH HOH . H 4 HOH A 22 322 55 HOH HOH . H 4 HOH A 23 323 58 HOH HOH . H 4 HOH A 24 324 60 HOH HOH . H 4 HOH A 25 325 61 HOH HOH . H 4 HOH A 26 326 66 HOH HOH . H 4 HOH A 27 327 68 HOH HOH . H 4 HOH A 28 328 72 HOH HOH . H 4 HOH A 29 329 74 HOH HOH . H 4 HOH A 30 330 75 HOH HOH . H 4 HOH A 31 331 81 HOH HOH . H 4 HOH A 32 332 83 HOH HOH . H 4 HOH A 33 333 85 HOH HOH . H 4 HOH A 34 334 86 HOH HOH . H 4 HOH A 35 335 87 HOH HOH . H 4 HOH A 36 336 88 HOH HOH . H 4 HOH A 37 337 90 HOH HOH . H 4 HOH A 38 338 94 HOH HOH . H 4 HOH A 39 339 95 HOH HOH . H 4 HOH A 40 340 96 HOH HOH . H 4 HOH A 41 341 101 HOH HOH . H 4 HOH A 42 342 103 HOH HOH . H 4 HOH A 43 343 104 HOH HOH . H 4 HOH A 44 344 105 HOH HOH . H 4 HOH A 45 345 106 HOH HOH . H 4 HOH A 46 346 110 HOH HOH . H 4 HOH A 47 347 112 HOH HOH . H 4 HOH A 48 348 115 HOH HOH . H 4 HOH A 49 349 118 HOH HOH . H 4 HOH A 50 350 120 HOH HOH . H 4 HOH A 51 351 121 HOH HOH . H 4 HOH A 52 352 122 HOH HOH . H 4 HOH A 53 353 127 HOH HOH . H 4 HOH A 54 354 128 HOH HOH . H 4 HOH A 55 355 132 HOH HOH . H 4 HOH A 56 356 134 HOH HOH . H 4 HOH A 57 357 135 HOH HOH . H 4 HOH A 58 358 137 HOH HOH . H 4 HOH A 59 359 138 HOH HOH . H 4 HOH A 60 360 143 HOH HOH . H 4 HOH A 61 361 145 HOH HOH . H 4 HOH A 62 362 146 HOH HOH . H 4 HOH A 63 363 147 HOH HOH . H 4 HOH A 64 364 148 HOH HOH . H 4 HOH A 65 365 149 HOH HOH . H 4 HOH A 66 366 150 HOH HOH . H 4 HOH A 67 367 153 HOH HOH . H 4 HOH A 68 368 154 HOH HOH . H 4 HOH A 69 369 159 HOH HOH . H 4 HOH A 70 370 161 HOH HOH . H 4 HOH A 71 371 164 HOH HOH . H 4 HOH A 72 372 165 HOH HOH . H 4 HOH A 73 373 166 HOH HOH . H 4 HOH A 74 374 167 HOH HOH . H 4 HOH A 75 375 168 HOH HOH . H 4 HOH A 76 376 171 HOH HOH . H 4 HOH A 77 377 173 HOH HOH . H 4 HOH A 78 378 175 HOH HOH . H 4 HOH A 79 379 181 HOH HOH . H 4 HOH A 80 380 188 HOH HOH . H 4 HOH A 81 381 193 HOH HOH . H 4 HOH A 82 382 194 HOH HOH . H 4 HOH A 83 383 197 HOH HOH . H 4 HOH A 84 384 198 HOH HOH . H 4 HOH A 85 385 202 HOH HOH . H 4 HOH A 86 386 203 HOH HOH . H 4 HOH A 87 387 204 HOH HOH . H 4 HOH A 88 388 208 HOH HOH . H 4 HOH A 89 389 209 HOH HOH . H 4 HOH A 90 390 214 HOH HOH . H 4 HOH A 91 391 216 HOH HOH . H 4 HOH A 92 392 218 HOH HOH . H 4 HOH A 93 393 220 HOH HOH . H 4 HOH A 94 394 222 HOH HOH . H 4 HOH A 95 395 223 HOH HOH . H 4 HOH A 96 396 224 HOH HOH . H 4 HOH A 97 397 226 HOH HOH . H 4 HOH A 98 398 227 HOH HOH . H 4 HOH A 99 399 228 HOH HOH . H 4 HOH A 100 400 229 HOH HOH . H 4 HOH A 101 401 230 HOH HOH . H 4 HOH A 102 402 231 HOH HOH . H 4 HOH A 103 403 232 HOH HOH . H 4 HOH A 104 404 233 HOH HOH . H 4 HOH A 105 405 235 HOH HOH . H 4 HOH A 106 406 238 HOH HOH . H 4 HOH A 107 407 240 HOH HOH . H 4 HOH A 108 408 241 HOH HOH . H 4 HOH A 109 409 242 HOH HOH . H 4 HOH A 110 410 243 HOH HOH . H 4 HOH A 111 411 244 HOH HOH . H 4 HOH A 112 412 246 HOH HOH . H 4 HOH A 113 413 251 HOH HOH . H 4 HOH A 114 414 252 HOH HOH . H 4 HOH A 115 415 253 HOH HOH . H 4 HOH A 116 416 255 HOH HOH . H 4 HOH A 117 417 269 HOH HOH . H 4 HOH A 118 418 273 HOH HOH . H 4 HOH A 119 419 275 HOH HOH . H 4 HOH A 120 420 279 HOH HOH . H 4 HOH A 121 421 283 HOH HOH . H 4 HOH A 122 422 287 HOH HOH . H 4 HOH A 123 423 291 HOH HOH . H 4 HOH A 124 424 292 HOH HOH . H 4 HOH A 125 425 294 HOH HOH . H 4 HOH A 126 426 296 HOH HOH . H 4 HOH A 127 427 298 HOH HOH . H 4 HOH A 128 428 301 HOH HOH . H 4 HOH A 129 429 302 HOH HOH . H 4 HOH A 130 430 303 HOH HOH . H 4 HOH A 131 431 306 HOH HOH . H 4 HOH A 132 432 310 HOH HOH . H 4 HOH A 133 433 311 HOH HOH . H 4 HOH A 134 434 312 HOH HOH . I 4 HOH B 1 301 2 HOH HOH . I 4 HOH B 2 302 5 HOH HOH . I 4 HOH B 3 303 8 HOH HOH . I 4 HOH B 4 304 12 HOH HOH . I 4 HOH B 5 305 16 HOH HOH . I 4 HOH B 6 306 17 HOH HOH . I 4 HOH B 7 307 20 HOH HOH . I 4 HOH B 8 308 22 HOH HOH . I 4 HOH B 9 309 25 HOH HOH . I 4 HOH B 10 310 26 HOH HOH . I 4 HOH B 11 311 28 HOH HOH . I 4 HOH B 12 312 31 HOH HOH . I 4 HOH B 13 313 37 HOH HOH . I 4 HOH B 14 314 38 HOH HOH . I 4 HOH B 15 315 41 HOH HOH . I 4 HOH B 16 316 42 HOH HOH . I 4 HOH B 17 317 45 HOH HOH . I 4 HOH B 18 318 46 HOH HOH . I 4 HOH B 19 319 47 HOH HOH . I 4 HOH B 20 320 48 HOH HOH . I 4 HOH B 21 321 49 HOH HOH . I 4 HOH B 22 322 51 HOH HOH . I 4 HOH B 23 323 52 HOH HOH . I 4 HOH B 24 324 53 HOH HOH . I 4 HOH B 25 325 56 HOH HOH . I 4 HOH B 26 326 57 HOH HOH . I 4 HOH B 27 327 59 HOH HOH . I 4 HOH B 28 328 67 HOH HOH . I 4 HOH B 29 329 71 HOH HOH . I 4 HOH B 30 330 77 HOH HOH . I 4 HOH B 31 331 78 HOH HOH . I 4 HOH B 32 332 80 HOH HOH . I 4 HOH B 33 333 82 HOH HOH . I 4 HOH B 34 334 91 HOH HOH . I 4 HOH B 35 335 93 HOH HOH . I 4 HOH B 36 336 97 HOH HOH . I 4 HOH B 37 337 99 HOH HOH . I 4 HOH B 38 338 100 HOH HOH . I 4 HOH B 39 339 107 HOH HOH . I 4 HOH B 40 340 109 HOH HOH . I 4 HOH B 41 341 113 HOH HOH . I 4 HOH B 42 342 114 HOH HOH . I 4 HOH B 43 343 119 HOH HOH . I 4 HOH B 44 344 124 HOH HOH . I 4 HOH B 45 345 125 HOH HOH . I 4 HOH B 46 346 126 HOH HOH . I 4 HOH B 47 347 130 HOH HOH . I 4 HOH B 48 348 131 HOH HOH . I 4 HOH B 49 349 133 HOH HOH . I 4 HOH B 50 350 136 HOH HOH . I 4 HOH B 51 351 142 HOH HOH . I 4 HOH B 52 352 152 HOH HOH . I 4 HOH B 53 353 157 HOH HOH . I 4 HOH B 54 354 158 HOH HOH . I 4 HOH B 55 355 160 HOH HOH . I 4 HOH B 56 356 162 HOH HOH . I 4 HOH B 57 357 163 HOH HOH . I 4 HOH B 58 358 169 HOH HOH . I 4 HOH B 59 359 170 HOH HOH . I 4 HOH B 60 360 172 HOH HOH . I 4 HOH B 61 361 174 HOH HOH . I 4 HOH B 62 362 177 HOH HOH . I 4 HOH B 63 363 179 HOH HOH . I 4 HOH B 64 364 182 HOH HOH . I 4 HOH B 65 365 183 HOH HOH . I 4 HOH B 66 366 184 HOH HOH . I 4 HOH B 67 367 185 HOH HOH . I 4 HOH B 68 368 186 HOH HOH . I 4 HOH B 69 369 187 HOH HOH . I 4 HOH B 70 370 191 HOH HOH . I 4 HOH B 71 371 195 HOH HOH . I 4 HOH B 72 372 196 HOH HOH . I 4 HOH B 73 373 199 HOH HOH . I 4 HOH B 74 374 200 HOH HOH . I 4 HOH B 75 375 205 HOH HOH . I 4 HOH B 76 376 206 HOH HOH . I 4 HOH B 77 377 207 HOH HOH . I 4 HOH B 78 378 210 HOH HOH . I 4 HOH B 79 379 211 HOH HOH . I 4 HOH B 80 380 213 HOH HOH . I 4 HOH B 81 381 221 HOH HOH . I 4 HOH B 82 382 236 HOH HOH . I 4 HOH B 83 383 237 HOH HOH . I 4 HOH B 84 384 239 HOH HOH . I 4 HOH B 85 385 245 HOH HOH . I 4 HOH B 86 386 247 HOH HOH . I 4 HOH B 87 387 248 HOH HOH . I 4 HOH B 88 388 249 HOH HOH . I 4 HOH B 89 389 250 HOH HOH . I 4 HOH B 90 390 254 HOH HOH . I 4 HOH B 91 391 256 HOH HOH . I 4 HOH B 92 392 257 HOH HOH . I 4 HOH B 93 393 259 HOH HOH . I 4 HOH B 94 394 260 HOH HOH . I 4 HOH B 95 395 261 HOH HOH . I 4 HOH B 96 396 264 HOH HOH . I 4 HOH B 97 397 265 HOH HOH . I 4 HOH B 98 398 268 HOH HOH . I 4 HOH B 99 399 270 HOH HOH . I 4 HOH B 100 400 271 HOH HOH . I 4 HOH B 101 401 272 HOH HOH . I 4 HOH B 102 402 274 HOH HOH . I 4 HOH B 103 403 276 HOH HOH . I 4 HOH B 104 404 277 HOH HOH . I 4 HOH B 105 405 278 HOH HOH . I 4 HOH B 106 406 280 HOH HOH . I 4 HOH B 107 407 282 HOH HOH . I 4 HOH B 108 408 284 HOH HOH . I 4 HOH B 109 409 286 HOH HOH . I 4 HOH B 110 410 297 HOH HOH . I 4 HOH B 111 411 299 HOH HOH . I 4 HOH B 112 412 309 HOH HOH . I 4 HOH B 113 413 314 HOH HOH . J 4 HOH C 1 301 3 HOH HOH . J 4 HOH C 2 302 7 HOH HOH . J 4 HOH C 3 303 11 HOH HOH . J 4 HOH C 4 304 14 HOH HOH . J 4 HOH C 5 305 21 HOH HOH . J 4 HOH C 6 306 24 HOH HOH . J 4 HOH C 7 307 44 HOH HOH . J 4 HOH C 8 308 50 HOH HOH . J 4 HOH C 9 309 54 HOH HOH . J 4 HOH C 10 310 62 HOH HOH . J 4 HOH C 11 311 63 HOH HOH . J 4 HOH C 12 312 64 HOH HOH . J 4 HOH C 13 313 65 HOH HOH . J 4 HOH C 14 314 69 HOH HOH . J 4 HOH C 15 315 70 HOH HOH . J 4 HOH C 16 316 73 HOH HOH . J 4 HOH C 17 317 76 HOH HOH . J 4 HOH C 18 318 79 HOH HOH . J 4 HOH C 19 319 84 HOH HOH . J 4 HOH C 20 320 89 HOH HOH . J 4 HOH C 21 321 92 HOH HOH . J 4 HOH C 22 322 98 HOH HOH . J 4 HOH C 23 323 102 HOH HOH . J 4 HOH C 24 324 108 HOH HOH . J 4 HOH C 25 325 111 HOH HOH . J 4 HOH C 26 326 116 HOH HOH . J 4 HOH C 27 327 117 HOH HOH . J 4 HOH C 28 328 123 HOH HOH . J 4 HOH C 29 329 129 HOH HOH . J 4 HOH C 30 330 139 HOH HOH . J 4 HOH C 31 331 140 HOH HOH . J 4 HOH C 32 332 141 HOH HOH . J 4 HOH C 33 333 144 HOH HOH . J 4 HOH C 34 334 151 HOH HOH . J 4 HOH C 35 335 155 HOH HOH . J 4 HOH C 36 336 156 HOH HOH . J 4 HOH C 37 337 176 HOH HOH . J 4 HOH C 38 338 178 HOH HOH . J 4 HOH C 39 339 180 HOH HOH . J 4 HOH C 40 340 189 HOH HOH . J 4 HOH C 41 341 190 HOH HOH . J 4 HOH C 42 342 192 HOH HOH . J 4 HOH C 43 343 201 HOH HOH . J 4 HOH C 44 344 212 HOH HOH . J 4 HOH C 45 345 215 HOH HOH . J 4 HOH C 46 346 217 HOH HOH . J 4 HOH C 47 347 219 HOH HOH . J 4 HOH C 48 348 225 HOH HOH . J 4 HOH C 49 349 234 HOH HOH . J 4 HOH C 50 350 258 HOH HOH . J 4 HOH C 51 351 262 HOH HOH . J 4 HOH C 52 352 263 HOH HOH . J 4 HOH C 53 353 266 HOH HOH . J 4 HOH C 54 354 267 HOH HOH . J 4 HOH C 55 355 281 HOH HOH . J 4 HOH C 56 356 285 HOH HOH . J 4 HOH C 57 357 288 HOH HOH . J 4 HOH C 58 358 289 HOH HOH . J 4 HOH C 59 359 290 HOH HOH . J 4 HOH C 60 360 293 HOH HOH . J 4 HOH C 61 361 295 HOH HOH . J 4 HOH C 62 362 300 HOH HOH . J 4 HOH C 63 363 304 HOH HOH . J 4 HOH C 64 364 305 HOH HOH . J 4 HOH C 65 365 307 HOH HOH . J 4 HOH C 66 366 308 HOH HOH . J 4 HOH C 67 367 313 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . F 2 21.309 10.365 187.076 1 23.25 ? PB GDP 202 B 1 HETATM 2 O O1B GDP . . . F 2 20.683 11.726 187.008 1 23.89 ? O1B GDP 202 B 1 HETATM 3 O O2B GDP . . . F 2 20.587 9.412 188.019 1 25.9 ? O2B GDP 202 B 1 HETATM 4 O O3B GDP . . . F 2 21.428 9.68 185.716 1 22.33 ? O3B GDP 202 B 1 HETATM 5 O O3A GDP . . . F 2 22.812 10.457 187.603 1 22.82 ? O3A GDP 202 B 1 HETATM 6 P PA GDP . . . F 2 23.543 11.607 188.487 1 25.74 ? PA GDP 202 B 1 HETATM 7 O O1A GDP . . . F 2 22.799 11.701 189.81 1 32.36 ? O1A GDP 202 B 1 HETATM 8 O O2A GDP . . . F 2 23.644 12.881 187.716 1 26.03 ? O2A GDP 202 B 1 HETATM 9 O O5' GDP . . . F 2 24.973 10.99 188.7 1 23.97 ? O5' GDP 202 B 1 HETATM 10 C C5' GDP . . . F 2 25.115 9.755 189.401 1 23.89 ? C5' GDP 202 B 1 HETATM 11 C C4' GDP . . . F 2 26.51 9.658 189.979 1 25.34 ? C4' GDP 202 B 1 HETATM 12 O O4' GDP . . . F 2 27.477 9.631 188.925 1 24.26 ? O4' GDP 202 B 1 HETATM 13 C C3' GDP . . . F 2 26.891 10.856 190.833 1 28.05 ? C3' GDP 202 B 1 HETATM 14 O O3' GDP . . . F 2 27.686 10.356 191.917 1 34.3 ? O3' GDP 202 B 1 HETATM 15 C C2' GDP . . . F 2 27.697 11.735 189.908 1 24.84 ? C2' GDP 202 B 1 HETATM 16 O O2' GDP . . . F 2 28.644 12.569 190.582 1 29.35 ? O2' GDP 202 B 1 HETATM 17 C C1' GDP . . . F 2 28.402 10.713 189.059 1 25.33 ? C1' GDP 202 B 1 HETATM 18 N N9 GDP . . . F 2 28.712 11.187 187.704 1 22.33 ? N9 GDP 202 B 1 HETATM 19 C C8 GDP . . . F 2 27.838 11.701 186.816 1 22.11 ? C8 GDP 202 B 1 HETATM 20 N N7 GDP . . . F 2 28.475 11.969 185.66 1 20.69 ? N7 GDP 202 B 1 HETATM 21 C C5 GDP . . . F 2 29.767 11.646 185.819 1 21.02 ? C5 GDP 202 B 1 HETATM 22 C C6 GDP . . . F 2 30.954 11.636 184.99 1 20.98 ? C6 GDP 202 B 1 HETATM 23 O O6 GDP . . . F 2 30.936 12.068 183.816 1 19.7 ? O6 GDP 202 B 1 HETATM 24 N N1 GDP . . . F 2 32.083 11.183 185.58 1 19.12 ? N1 GDP 202 B 1 HETATM 25 C C2 GDP . . . F 2 32.139 10.698 186.836 1 22.91 ? C2 GDP 202 B 1 HETATM 26 N N2 GDP . . . F 2 33.318 10.248 187.317 1 25.34 ? N2 GDP 202 B 1 HETATM 27 N N3 GDP . . . F 2 31.074 10.639 187.631 1 21.61 ? N3 GDP 202 B 1 HETATM 28 C C4 GDP . . . F 2 29.895 11.091 187.17 1 21.6 ? C4 GDP 202 B 1 HETATM 29 H H4' GDP . . . F 2 26.585 8.745 190.586 1 30.41 ? H4' GDP 202 B 1 HETATM 30 H H3' GDP . . . F 2 25.993 11.381 191.187 1 33.66 ? H3' GDP 202 B 1 HETATM 31 H HO3' GDP . . . F 2 27.965 11.093 192.478 1 41.16 ? HO3' GDP 202 B 1 HETATM 32 H H2' GDP . . . F 2 27.021 12.333 189.282 1 29.81 ? H2' GDP 202 B 1 HETATM 33 H HO2' GDP . . . F 2 28.176 13.179 191.169 1 35.22 ? HO2' GDP 202 B 1 HETATM 34 H H1' GDP . . . F 2 29.315 10.379 189.571 1 30.39 ? H1' GDP 202 B 1 HETATM 35 H H8 GDP . . . F 2 26.785 11.87 187.003 1 26.53 ? H8 GDP 202 B 1 HETATM 36 H HN1 GDP . . . F 2 32.957 11.177 185.017 1 22.94 ? HN1 GDP 202 B 1 HETATM 37 H HN21 GDP . . . F 2 33.374 9.886 188.259 1 30.4 ? HN21 GDP 202 B 1 HETATM 38 H HN22 GDP . . . F 2 34.143 10.27 186.735 1 30.4 ? HN22 GDP 202 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 38 #