data_4M3D # _model_server_result.job_id zljLuNPxsXBowbduN3WbXg _model_server_result.datetime_utc '2025-07-01 23:51:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4M3D # _exptl.entry_id 4M3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 410.41 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{3-[(phenylsulfonyl)amino]prop-1-yn-1-yl}-N-(3,3,3-trifluoropropyl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M3D _cell.length_a 120.482 _cell.length_b 120.482 _cell.length_c 33.768 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -16.884 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H17 F3 N2 O3 S' _chem_comp.formula_weight 410.41 _chem_comp.id 2H2 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{3-[(phenylsulfonyl)amino]prop-1-yn-1-yl}-N-(3,3,3-trifluoropropyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C 2H2 sing 1 n n F2 C 2H2 sing 2 n n O C3 2H2 doub 3 n n C F 2H2 sing 4 n n C C1 2H2 sing 5 n n C9 C8 2H2 doub 6 n y C9 C4 2H2 sing 7 n y C1 C2 2H2 sing 8 n n C3 C4 2H2 sing 9 n n C3 N 2H2 sing 10 n n C8 C7 2H2 sing 11 n y O1 S 2H2 doub 12 n n C2 N 2H2 sing 13 n n C4 C5 2H2 doub 14 n y O2 S 2H2 doub 15 n n C18 C17 2H2 doub 16 n y C18 C13 2H2 sing 17 n y S C13 2H2 sing 18 n n S N1 2H2 sing 19 n n C7 C10 2H2 sing 20 n n C7 C6 2H2 doub 21 n y C17 C16 2H2 sing 22 n y C13 C14 2H2 doub 23 n y C10 C11 2H2 trip 24 n n C5 C6 2H2 sing 25 n y C11 C12 2H2 sing 26 n n N1 C12 2H2 sing 27 n n C16 C15 2H2 doub 28 n y C14 C15 2H2 sing 29 n y C18 H1 2H2 sing 30 n n C17 H2 2H2 sing 31 n n C16 H3 2H2 sing 32 n n C15 H4 2H2 sing 33 n n C14 H5 2H2 sing 34 n n N1 H6 2H2 sing 35 n n C12 H7 2H2 sing 36 n n C12 H8 2H2 sing 37 n n C6 H9 2H2 sing 38 n n C5 H10 2H2 sing 39 n n C8 H11 2H2 sing 40 n n C9 H12 2H2 sing 41 n n N H13 2H2 sing 42 n n C2 H14 2H2 sing 43 n n C2 H15 2H2 sing 44 n n C1 H16 2H2 sing 45 n n C1 H17 2H2 sing 46 n n # _atom_sites.entry_id 4M3D _atom_sites.fract_transf_matrix[1][1] 0.0083 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029614 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2H2 A 1 301 1 2H2 H2 . C 3 HOH A 1 401 1 HOH HOH . C 3 HOH A 2 402 2 HOH HOH . C 3 HOH A 3 403 3 HOH HOH . C 3 HOH A 4 404 4 HOH HOH . C 3 HOH A 5 405 5 HOH HOH . C 3 HOH A 6 406 6 HOH HOH . C 3 HOH A 7 407 7 HOH HOH . C 3 HOH A 8 408 8 HOH HOH . C 3 HOH A 9 409 9 HOH HOH . C 3 HOH A 10 410 10 HOH HOH . C 3 HOH A 11 411 11 HOH HOH . C 3 HOH A 12 412 12 HOH HOH . C 3 HOH A 13 413 14 HOH HOH . C 3 HOH A 14 414 15 HOH HOH . C 3 HOH A 15 415 16 HOH HOH . C 3 HOH A 16 416 17 HOH HOH . C 3 HOH A 17 417 19 HOH HOH . C 3 HOH A 18 418 20 HOH HOH . C 3 HOH A 19 419 21 HOH HOH . C 3 HOH A 20 420 22 HOH HOH . C 3 HOH A 21 421 23 HOH HOH . C 3 HOH A 22 422 24 HOH HOH . C 3 HOH A 23 423 25 HOH HOH . C 3 HOH A 24 424 26 HOH HOH . C 3 HOH A 25 425 27 HOH HOH . C 3 HOH A 26 426 28 HOH HOH . C 3 HOH A 27 427 29 HOH HOH . C 3 HOH A 28 428 30 HOH HOH . C 3 HOH A 29 429 31 HOH HOH . C 3 HOH A 30 430 32 HOH HOH . C 3 HOH A 31 431 33 HOH HOH . C 3 HOH A 32 432 34 HOH HOH . C 3 HOH A 33 433 35 HOH HOH . C 3 HOH A 34 434 36 HOH HOH . C 3 HOH A 35 435 37 HOH HOH . C 3 HOH A 36 436 38 HOH HOH . C 3 HOH A 37 437 39 HOH HOH . C 3 HOH A 38 438 40 HOH HOH . C 3 HOH A 39 439 41 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 2H2 . . . B 2 27.434 -2.541 -5.247 1 25.39 ? O2 2H2 301 A 1 HETATM 2 S S 2H2 . . . B 2 26.31 -3.418 -4.985 1 25.77 ? S 2H2 301 A 1 HETATM 3 O O1 2H2 . . . B 2 25.911 -4.149 -6.18 1 23.61 ? O1 2H2 301 A 1 HETATM 4 C C13 2H2 . . . B 2 25.029 -2.564 -4.475 1 24.6 ? C13 2H2 301 A 1 HETATM 5 C C18 2H2 . . . B 2 23.744 -2.812 -4.994 1 22.82 ? C18 2H2 301 A 1 HETATM 6 C C17 2H2 . . . B 2 22.642 -2.082 -4.522 1 23.25 ? C17 2H2 301 A 1 HETATM 7 C C16 2H2 . . . B 2 22.786 -1.1 -3.546 1 23.48 ? C16 2H2 301 A 1 HETATM 8 C C15 2H2 . . . B 2 24.07 -0.858 -3.037 1 25.84 ? C15 2H2 301 A 1 HETATM 9 C C14 2H2 . . . B 2 25.19 -1.573 -3.491 1 23.25 ? C14 2H2 301 A 1 HETATM 10 N N1 2H2 . . . B 2 26.768 -4.45 -3.878 1 21.27 ? N1 2H2 301 A 1 HETATM 11 C C12 2H2 . . . B 2 25.833 -5.547 -3.623 1 19.8 ? C12 2H2 301 A 1 HETATM 12 C C11 2H2 . . . B 2 26.254 -6.908 -4.104 1 16.03 ? C11 2H2 301 A 1 HETATM 13 C C10 2H2 . . . B 2 26.555 -7.998 -4.457 1 16.03 ? C10 2H2 301 A 1 HETATM 14 C C7 2H2 . . . B 2 26.859 -9.209 -4.856 1 15.73 ? C7 2H2 301 A 1 HETATM 15 C C6 2H2 . . . B 2 27.269 -10.184 -3.964 1 14.75 ? C6 2H2 301 A 1 HETATM 16 C C5 2H2 . . . B 2 27.499 -11.477 -4.445 1 14 ? C5 2H2 301 A 1 HETATM 17 C C8 2H2 . . . B 2 26.566 -9.537 -6.188 1 15.7 ? C8 2H2 301 A 1 HETATM 18 C C9 2H2 . . . B 2 26.781 -10.791 -6.698 1 14.05 ? C9 2H2 301 A 1 HETATM 19 C C4 2H2 . . . B 2 27.261 -11.773 -5.826 1 14.84 ? C4 2H2 301 A 1 HETATM 20 C C3 2H2 . . . B 2 27.532 -13.146 -6.355 1 15.21 ? C3 2H2 301 A 1 HETATM 21 O O 2H2 . . . B 2 27.434 -13.307 -7.569 1 15.93 ? O 2H2 301 A 1 HETATM 22 N N 2H2 . . . B 2 27.926 -14.133 -5.515 1 16.4 ? N 2H2 301 A 1 HETATM 23 C C2 2H2 . . . B 2 28.236 -15.45 -5.983 1 17.66 ? C2 2H2 301 A 1 HETATM 24 C C1 2H2 . . . B 2 29.683 -15.435 -6.536 1 19.23 ? C1 2H2 301 A 1 HETATM 25 C C 2H2 . . . B 2 30.076 -16.627 -7.391 1 19.8 ? C 2H2 301 A 1 HETATM 26 F F 2H2 . . . B 2 29.941 -17.793 -6.777 1 19.4 ? F 2H2 301 A 1 HETATM 27 F F1 2H2 . . . B 2 29.315 -16.631 -8.447 1 19.78 ? F1 2H2 301 A 1 HETATM 28 F F2 2H2 . . . B 2 31.321 -16.482 -7.802 1 22.27 ? F2 2H2 301 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 28 #