data_4M3H # _model_server_result.job_id 9EcayGBs6m96AsAX1c3kxA _model_server_result.datetime_utc '2025-07-01 23:51:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m3h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":404}' # _entry.id 4M3H # _exptl.entry_id 4M3H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M3H _cell.length_a 51.54 _cell.length_b 103.82 _cell.length_c 162.26 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M3H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 N N N ? 2 O N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 101 A HIS 101 1_555 F CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc2 A NE2 HIS 153 A HIS 153 1_555 F CU CU . A CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc3 A NE2 HIS 155 A HIS 155 1_555 I CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc4 A ND1 HIS 228 A HIS 228 1_555 D CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc5 A NE2 HIS 233 A HIS 233 1_555 E CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc6 A NE2 HIS 284 A HIS 284 1_555 E CU CU . A CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc7 A SG CYS 285 A CYS 285 1_555 D CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc8 A NE2 HIS 286 A HIS 286 1_555 N CU CU . C CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc9 A ND1 HIS 290 A HIS 290 1_555 D CU CU . A CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc10 E CU CU . A CU 402 1_555 C NE2 HIS 155 C HIS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc11 F CU CU . A CU 403 1_555 B NE2 HIS 286 B HIS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc12 G CU CU . A CU 404 1_555 I CU CU . B CU 402 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc13 B NE2 HIS 101 B HIS 101 1_555 K CU CU . B CU 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc14 B NE2 HIS 153 B HIS 153 1_555 K CU CU . B CU 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc15 B NE2 HIS 155 B HIS 155 1_555 P CU CU . C CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc16 B ND1 HIS 228 B HIS 228 1_555 H CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc17 B NE2 HIS 233 B HIS 233 1_555 I CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc18 B NE2 HIS 284 B HIS 284 1_555 I CU CU . B CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc19 B SG CYS 285 B CYS 285 1_555 H CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc20 B ND1 HIS 290 B HIS 290 1_555 H CU CU . B CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc21 I CU CU . B CU 402 1_555 J O O . B O 403 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.467 ? metalc ? metalc22 K CU CU . B CU 404 1_555 L CU CU . B CU 405 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.978 ? metalc ? metalc23 K CU CU . B CU 404 1_555 C NE2 HIS 286 C HIS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc24 L CU CU . B CU 405 1_555 C NE2 HIS 286 C HIS 286 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc25 M O O . B O 406 1_555 P CU CU . C CU 403 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc26 C NE2 HIS 101 C HIS 101 1_555 N CU CU . C CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc27 C NE2 HIS 153 C HIS 153 1_555 N CU CU . C CU 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc28 C ND1 HIS 228 C HIS 228 1_555 O CU CU . C CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc29 C NE2 HIS 233 C HIS 233 1_555 P CU CU . C CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc30 C NE2 HIS 284 C HIS 284 1_555 P CU CU . C CU 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc31 C SG CYS 285 C CYS 285 1_555 O CU CU . C CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc32 C ND1 HIS 290 C HIS 290 1_555 O CU CU . C CU 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4M3H _atom_sites.fract_transf_matrix[1][1] 0.019402 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009632 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CU A 1 401 411 CU CU . E 2 CU A 1 402 413 CU CU . F 2 CU A 1 403 412 CU CU . G 2 CU A 1 404 414 CU CU . H 2 CU B 1 401 411 CU CU . I 2 CU B 1 402 413 CU CU . J 3 O B 1 403 501 O O . K 2 CU B 1 404 412 CU CU . L 2 CU B 1 405 414 CU CU . M 3 O B 1 406 501 O O . N 2 CU C 1 401 412 CU CU . O 2 CU C 1 402 411 CU CU . P 2 CU C 1 403 413 CU CU . Q 4 HOH A 1 501 613 HOH HOH . Q 4 HOH A 2 502 616 HOH HOH . Q 4 HOH A 3 503 618 HOH HOH . Q 4 HOH A 4 504 619 HOH HOH . Q 4 HOH A 5 505 620 HOH HOH . Q 4 HOH A 6 506 622 HOH HOH . Q 4 HOH A 7 507 630 HOH HOH . Q 4 HOH A 8 508 632 HOH HOH . Q 4 HOH A 9 509 640 HOH HOH . Q 4 HOH A 10 510 645 HOH HOH . Q 4 HOH A 11 511 655 HOH HOH . Q 4 HOH A 12 512 657 HOH HOH . Q 4 HOH A 13 513 660 HOH HOH . Q 4 HOH A 14 514 664 HOH HOH . Q 4 HOH A 15 515 666 HOH HOH . Q 4 HOH A 16 516 667 HOH HOH . Q 4 HOH A 17 517 672 HOH HOH . Q 4 HOH A 18 518 674 HOH HOH . Q 4 HOH A 19 519 676 HOH HOH . Q 4 HOH A 20 520 679 HOH HOH . Q 4 HOH A 21 521 681 HOH HOH . Q 4 HOH A 22 522 684 HOH HOH . Q 4 HOH A 23 523 687 HOH HOH . Q 4 HOH A 24 524 696 HOH HOH . Q 4 HOH A 25 525 700 HOH HOH . Q 4 HOH A 26 526 704 HOH HOH . Q 4 HOH A 27 527 707 HOH HOH . Q 4 HOH A 28 528 725 HOH HOH . Q 4 HOH A 29 529 734 HOH HOH . Q 4 HOH A 30 530 736 HOH HOH . Q 4 HOH A 31 531 637 HOH HOH . Q 4 HOH A 32 532 614 HOH HOH . Q 4 HOH A 33 533 733 HOH HOH . Q 4 HOH A 34 534 11 HOH HOH . Q 4 HOH A 35 535 20 HOH HOH . Q 4 HOH A 36 536 52 HOH HOH . Q 4 HOH A 37 537 65 HOH HOH . Q 4 HOH A 38 538 76 HOH HOH . Q 4 HOH A 39 539 77 HOH HOH . R 4 HOH B 1 501 614 HOH HOH . R 4 HOH B 2 502 616 HOH HOH . R 4 HOH B 3 503 618 HOH HOH . R 4 HOH B 4 504 619 HOH HOH . R 4 HOH B 5 505 621 HOH HOH . R 4 HOH B 6 506 622 HOH HOH . R 4 HOH B 7 507 623 HOH HOH . R 4 HOH B 8 508 632 HOH HOH . R 4 HOH B 9 509 633 HOH HOH . R 4 HOH B 10 510 639 HOH HOH . R 4 HOH B 11 511 642 HOH HOH . R 4 HOH B 12 512 643 HOH HOH . R 4 HOH B 13 513 652 HOH HOH . R 4 HOH B 14 514 653 HOH HOH . R 4 HOH B 15 515 662 HOH HOH . R 4 HOH B 16 516 663 HOH HOH . R 4 HOH B 17 517 667 HOH HOH . R 4 HOH B 18 518 670 HOH HOH . R 4 HOH B 19 519 671 HOH HOH . R 4 HOH B 20 520 675 HOH HOH . R 4 HOH B 21 521 703 HOH HOH . R 4 HOH B 22 522 712 HOH HOH . R 4 HOH B 23 523 716 HOH HOH . R 4 HOH B 24 524 718 HOH HOH . R 4 HOH B 25 525 670 HOH HOH . R 4 HOH B 26 526 9 HOH HOH . R 4 HOH B 27 527 14 HOH HOH . R 4 HOH B 28 528 17 HOH HOH . R 4 HOH B 29 529 21 HOH HOH . S 4 HOH C 1 501 712 HOH HOH . S 4 HOH C 2 502 647 HOH HOH . S 4 HOH C 3 503 613 HOH HOH . S 4 HOH C 4 504 616 HOH HOH . S 4 HOH C 5 505 618 HOH HOH . S 4 HOH C 6 506 619 HOH HOH . S 4 HOH C 7 507 624 HOH HOH . S 4 HOH C 8 508 628 HOH HOH . S 4 HOH C 9 509 629 HOH HOH . S 4 HOH C 10 510 631 HOH HOH . S 4 HOH C 11 511 632 HOH HOH . S 4 HOH C 12 512 633 HOH HOH . S 4 HOH C 13 513 634 HOH HOH . S 4 HOH C 14 514 636 HOH HOH . S 4 HOH C 15 515 637 HOH HOH . S 4 HOH C 16 516 641 HOH HOH . S 4 HOH C 17 517 645 HOH HOH . S 4 HOH C 18 518 652 HOH HOH . S 4 HOH C 19 519 655 HOH HOH . S 4 HOH C 20 520 658 HOH HOH . S 4 HOH C 21 521 659 HOH HOH . S 4 HOH C 22 522 665 HOH HOH . S 4 HOH C 23 523 668 HOH HOH . S 4 HOH C 24 524 671 HOH HOH . S 4 HOH C 25 525 680 HOH HOH . S 4 HOH C 26 526 688 HOH HOH . S 4 HOH C 27 527 690 HOH HOH . S 4 HOH C 28 528 691 HOH HOH . S 4 HOH C 29 529 696 HOH HOH . S 4 HOH C 30 530 700 HOH HOH . S 4 HOH C 31 531 706 HOH HOH . S 4 HOH C 32 532 713 HOH HOH . S 4 HOH C 33 533 718 HOH HOH . S 4 HOH C 34 534 731 HOH HOH . S 4 HOH C 35 535 734 HOH HOH . S 4 HOH C 36 536 1 HOH HOH . S 4 HOH C 37 537 2 HOH HOH . S 4 HOH C 38 538 3 HOH HOH . S 4 HOH C 39 539 4 HOH HOH . S 4 HOH C 40 540 5 HOH HOH . S 4 HOH C 41 541 6 HOH HOH . S 4 HOH C 42 542 8 HOH HOH . S 4 HOH C 43 543 10 HOH HOH . S 4 HOH C 44 544 12 HOH HOH . S 4 HOH C 45 545 13 HOH HOH . S 4 HOH C 46 546 18 HOH HOH . S 4 HOH C 47 547 22 HOH HOH . S 4 HOH C 48 548 26 HOH HOH . S 4 HOH C 49 549 27 HOH HOH . S 4 HOH C 50 550 28 HOH HOH . S 4 HOH C 51 551 33 HOH HOH . S 4 HOH C 52 552 47 HOH HOH . S 4 HOH C 53 553 48 HOH HOH . S 4 HOH C 54 554 53 HOH HOH . S 4 HOH C 55 555 74 HOH HOH . S 4 HOH C 56 556 81 HOH HOH . S 4 HOH C 57 557 83 HOH HOH . S 4 HOH C 58 558 92 HOH HOH . S 4 HOH C 59 559 96 HOH HOH . S 4 HOH C 60 560 105 HOH HOH . S 4 HOH C 61 561 110 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.378 _atom_site.Cartn_y -16.543 _atom_site.Cartn_z 22.353 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #