data_4M4G # _model_server_result.job_id 8ZylKF9rS79BsImPeYqeHA _model_server_result.datetime_utc '2024-11-25 10:45:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m4g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4M4G # _exptl.entry_id 4M4G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-ACETYL-SERINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment SAC _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M4G _cell.length_a 57.736 _cell.length_b 74.3 _cell.length_c 104.732 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M4G _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -52.366 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id SAC _chem_comp.mon_nstd_flag n _chem_comp.name N-ACETYL-SERINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1A C2A SAC sing 293 n n C1A OAC SAC doub 294 n n C1A N SAC sing 295 n n C2A H2A1 SAC sing 296 n n C2A H2A2 SAC sing 297 n n C2A H2A3 SAC sing 298 n n N CA SAC sing 299 n n N H SAC sing 300 n n CA C SAC sing 301 n n CA CB SAC sing 302 n n CA HA SAC sing 303 n n C O SAC doub 304 n n C OXT SAC sing 305 n n OXT HXT SAC sing 306 n n CB OG SAC sing 307 n n CB HB2 SAC sing 308 n n CB HB3 SAC sing 309 n n OG HG SAC sing 310 n n # _atom_sites.entry_id 4M4G _atom_sites.fract_transf_matrix[1][1] 0.01732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009548 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAC A 1 401 1 SAC SAC . C 2 SAC A 1 402 1 SAC SAC . D 3 PEG A 1 403 1 PEG PEG . E 4 HOH A 1 501 1 HOH HOH . E 4 HOH A 2 502 3 HOH HOH . E 4 HOH A 3 503 5 HOH HOH . E 4 HOH A 4 504 7 HOH HOH . E 4 HOH A 5 505 8 HOH HOH . E 4 HOH A 6 506 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1A SAC . . . B 2 2.948 9.309 -19.275 1 61.1 ? C1A SAC 401 A 1 HETATM 2 C C2A SAC . . . B 2 2.966 10.819 -19.307 1 64.89 ? C2A SAC 401 A 1 HETATM 3 O OAC SAC . . . B 2 2.464 8.673 -20.23 1 53.95 ? OAC SAC 401 A 1 HETATM 4 N N SAC . . . B 2 3.471 8.607 -18.186 1 47.64 ? N SAC 401 A 1 HETATM 5 C CA SAC . . . B 2 4.082 9.079 -16.962 1 45.27 ? CA SAC 401 A 1 HETATM 6 C C SAC . . . B 2 3.155 9.929 -16.091 1 48.78 ? C SAC 401 A 1 HETATM 7 O O SAC . . . B 2 3.377 11.273 -16.166 1 69.37 ? O SAC 401 A 1 HETATM 8 O OXT SAC . . . B 2 2.257 9.555 -15.34 1 31.04 ? OXT SAC 401 A 1 HETATM 9 C CB SAC . . . B 2 5.436 9.82 -17.153 1 52.49 ? CB SAC 401 A 1 HETATM 10 O OG SAC . . . B 2 6.393 8.82 -17.451 1 56.86 ? OG SAC 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 10 #