data_4M6G
#
_model_server_result.job_id            gf5rqc5Ndvd5MpAZgbghAg 
_model_server_result.datetime_utc      '2025-04-23 15:04:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4m6g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":404}' 
#
_entry.id    4M6G 
#
_exptl.entry_id    4M6G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              146.144 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            D-alpha-glutamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4M6G 
_cell.length_a            55.982 
_cell.length_b            75.958 
_cell.length_c            49.454 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4M6G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 A CYS 57 1_555 A SG CYS 89 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
covale ? covale1 D C ALA . A ALA 403 1_555 E N ZGL . A ZGL 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? 
metalc ? metalc1 A NE2 HIS 19 A HIS 35 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc2 A OE1 GLU 54 A GLU 70 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
metalc ? metalc3 A OE2 GLU 54 A GLU 70 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc4 A NE2 HIS 55 A HIS 71 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
metalc ? metalc5 A ND1 HIS 109 A HIS 125 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc6 B ZN ZN . A ZN 401 1_555 D N ALA . A ALA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
#
_chem_comp.formula           'C5 H10 N2 O3' 
_chem_comp.formula_weight    146.144 
_chem_comp.id                ZGL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              D-alpha-glutamine 
_chem_comp.type              'd-peptide linking' 
_chem_comp.pdbx_synonyms     Iso-D-glutamine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 CD ZGL sing 376 n n 
CD O2 ZGL doub 377 n n 
CD CA ZGL sing 378 n n 
N CA ZGL sing 379 n n 
N H ZGL sing 380 n n 
N H2 ZGL sing 381 n n 
N1 HN1 ZGL sing 382 n n 
N1 HN1A ZGL sing 383 n n 
CB CA ZGL sing 384 n n 
CA HA ZGL sing 385 n n 
CB CG ZGL sing 386 n n 
CB HB ZGL sing 387 n n 
CB HBA ZGL sing 388 n n 
CG C ZGL sing 389 n n 
O C ZGL doub 390 n n 
C OXT ZGL sing 391 n n 
CG HG ZGL sing 392 n n 
CG HGA ZGL sing 393 n n 
OXT HXT ZGL sing 394 n n 
#
_atom_sites.entry_id                     4M6G 
_atom_sites.fract_transf_matrix[1][1]    0.017863 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013165 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020221 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 401 401 ZN ZN . 
C 2 ZN A 1 402 402 ZN ZN . 
D 3 ALA A 1 403 403 ALA ADG . 
E 4 ZGL A 1 404 403 ZGL ADG . 
F 5 HOH A 1 501 19 HOH HOH . 
F 5 HOH A 2 502 65 HOH HOH . 
F 5 HOH A 3 503 20 HOH HOH . 
F 5 HOH A 4 504 14 HOH HOH . 
F 5 HOH A 5 505 24 HOH HOH . 
F 5 HOH A 6 506 48 HOH HOH . 
F 5 HOH A 7 507 26 HOH HOH . 
F 5 HOH A 8 508 18 HOH HOH . 
F 5 HOH A 9 509 12 HOH HOH . 
F 5 HOH A 10 510 33 HOH HOH . 
F 5 HOH A 11 511 15 HOH HOH . 
F 5 HOH A 12 512 29 HOH HOH . 
F 5 HOH A 13 513 32 HOH HOH . 
F 5 HOH A 14 514 2 HOH HOH . 
F 5 HOH A 15 515 4 HOH HOH . 
F 5 HOH A 16 516 6 HOH HOH . 
F 5 HOH A 17 517 7 HOH HOH . 
F 5 HOH A 18 518 27 HOH HOH . 
F 5 HOH A 19 519 17 HOH HOH . 
F 5 HOH A 20 520 16 HOH HOH . 
F 5 HOH A 21 521 56 HOH HOH . 
F 5 HOH A 22 522 10 HOH HOH . 
F 5 HOH A 23 523 1 HOH HOH . 
F 5 HOH A 24 524 9 HOH HOH . 
F 5 HOH A 25 525 22 HOH HOH . 
F 5 HOH A 26 526 21 HOH HOH . 
F 5 HOH A 27 527 57 HOH HOH . 
F 5 HOH A 28 528 8 HOH HOH . 
F 5 HOH A 29 529 25 HOH HOH . 
F 5 HOH A 30 530 39 HOH HOH . 
F 5 HOH A 31 531 46 HOH HOH . 
F 5 HOH A 32 532 30 HOH HOH . 
F 5 HOH A 33 533 52 HOH HOH . 
F 5 HOH A 34 534 11 HOH HOH . 
F 5 HOH A 35 535 58 HOH HOH . 
F 5 HOH A 36 536 13 HOH HOH . 
F 5 HOH A 37 537 62 HOH HOH . 
F 5 HOH A 38 538 47 HOH HOH . 
F 5 HOH A 39 539 42 HOH HOH . 
F 5 HOH A 40 540 38 HOH HOH . 
F 5 HOH A 41 541 5 HOH HOH . 
F 5 HOH A 42 542 60 HOH HOH . 
F 5 HOH A 43 543 37 HOH HOH . 
F 5 HOH A 44 544 28 HOH HOH . 
F 5 HOH A 45 545 59 HOH HOH . 
F 5 HOH A 46 546 31 HOH HOH . 
F 5 HOH A 47 547 23 HOH HOH . 
F 5 HOH A 48 548 55 HOH HOH . 
F 5 HOH A 49 549 40 HOH HOH . 
F 5 HOH A 50 550 64 HOH HOH . 
F 5 HOH A 51 551 63 HOH HOH . 
F 5 HOH A 52 552 36 HOH HOH . 
F 5 HOH A 53 553 44 HOH HOH . 
F 5 HOH A 54 554 35 HOH HOH . 
F 5 HOH A 55 555 41 HOH HOH . 
F 5 HOH A 56 556 50 HOH HOH . 
F 5 HOH A 57 557 3 HOH HOH . 
F 5 HOH A 58 558 49 HOH HOH . 
F 5 HOH A 59 559 51 HOH HOH . 
F 5 HOH A 60 560 54 HOH HOH . 
F 5 HOH A 61 561 66 HOH HOH . 
F 5 HOH A 62 562 34 HOH HOH . 
F 5 HOH A 63 563 61 HOH HOH . 
F 5 HOH A 64 564 43 HOH HOH . 
F 5 HOH A 65 565 45 HOH HOH . 
F 5 HOH A 66 566 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CD ZGL . . . E 4 -13.293 9.712 -26.201 1 34.44 ? CD ZGL 404 A 1 
HETATM 2 N N ZGL . . . E 4 -14.466 11.751 -25.566 1 32.83 ? N ZGL 404 A 1 
HETATM 3 O O2 ZGL . . . E 4 -12.286 10.122 -25.597 1 29.77 ? O2 ZGL 404 A 1 
HETATM 4 N N1 ZGL . . . E 4 -13.179 8.586 -27.102 1 35.04 ? N1 ZGL 404 A 1 
HETATM 5 C CA ZGL . . . E 4 -14.637 10.388 -26.018 1 31.69 ? CA ZGL 404 A 1 
HETATM 6 C CB ZGL . . . E 4 -15.491 9.622 -25.043 1 30.9 ? CB ZGL 404 A 1 
HETATM 7 C C ZGL . . . E 4 -15.675 7.965 -23.026 1 33.56 ? C ZGL 404 A 1 
HETATM 8 C CG ZGL . . . E 4 -14.813 8.68 -24.072 1 34.85 ? CG ZGL 404 A 1 
HETATM 9 O OXT ZGL . . . E 4 -15.257 7.861 -21.83 1 35.09 ? OXT ZGL 404 A 1 
HETATM 10 O O ZGL . . . E 4 -16.797 7.475 -23.356 1 31.38 ? O ZGL 404 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           68 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#