data_4M6M # _model_server_result.job_id vhuyv8q9c6vGSBvq6DgbCg _model_server_result.datetime_utc '2024-11-22 15:47:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m6m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4M6M # _exptl.entry_id 4M6M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M6M _cell.length_a 62.39 _cell.length_b 91.97 _cell.length_c 92.82 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M6M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 22 1_555 A SG CYS 90 L CYS 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 139 L CYS 139 1_555 A SG CYS 198 L CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 216 L CYS 216 1_555 B SG CYS 220 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 B SG CYS 144 H CYS 144 1_555 B SG CYS 200 H CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 260 n n C1 C2 PEG sing 261 n n C1 H11 PEG sing 262 n n C1 H12 PEG sing 263 n n O1 HO1 PEG sing 264 n n C2 O2 PEG sing 265 n n C2 H21 PEG sing 266 n n C2 H22 PEG sing 267 n n O2 C3 PEG sing 268 n n C3 C4 PEG sing 269 n n C3 H31 PEG sing 270 n n C3 H32 PEG sing 271 n n C4 O4 PEG sing 272 n n C4 H41 PEG sing 273 n n C4 H42 PEG sing 274 n n O4 HO4 PEG sing 275 n n # _atom_sites.entry_id 4M6M _atom_sites.fract_transf_matrix[1][1] 0.016028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL L 1 301 301 GOL GOL . D 4 MLA L 1 302 302 MLA MLA . E 5 PEG H 1 301 301 PEG PEG . F 6 HOH L 1 401 15 HOH HOH . F 6 HOH L 2 402 18 HOH HOH . F 6 HOH L 3 403 27 HOH HOH . F 6 HOH L 4 404 28 HOH HOH . F 6 HOH L 5 405 29 HOH HOH . F 6 HOH L 6 406 31 HOH HOH . F 6 HOH L 7 407 32 HOH HOH . F 6 HOH L 8 408 35 HOH HOH . F 6 HOH L 9 409 40 HOH HOH . F 6 HOH L 10 410 44 HOH HOH . F 6 HOH L 11 411 50 HOH HOH . F 6 HOH L 12 412 51 HOH HOH . F 6 HOH L 13 413 52 HOH HOH . F 6 HOH L 14 414 54 HOH HOH . F 6 HOH L 15 415 60 HOH HOH . F 6 HOH L 16 416 66 HOH HOH . F 6 HOH L 17 417 68 HOH HOH . F 6 HOH L 18 418 69 HOH HOH . F 6 HOH L 19 419 71 HOH HOH . F 6 HOH L 20 420 72 HOH HOH . F 6 HOH L 21 421 73 HOH HOH . F 6 HOH L 22 422 74 HOH HOH . F 6 HOH L 23 423 76 HOH HOH . F 6 HOH L 24 424 78 HOH HOH . F 6 HOH L 25 425 79 HOH HOH . F 6 HOH L 26 426 80 HOH HOH . F 6 HOH L 27 427 83 HOH HOH . F 6 HOH L 28 428 86 HOH HOH . F 6 HOH L 29 429 91 HOH HOH . F 6 HOH L 30 430 94 HOH HOH . F 6 HOH L 31 431 95 HOH HOH . F 6 HOH L 32 432 96 HOH HOH . F 6 HOH L 33 433 97 HOH HOH . F 6 HOH L 34 434 98 HOH HOH . F 6 HOH L 35 435 99 HOH HOH . F 6 HOH L 36 436 102 HOH HOH . F 6 HOH L 37 437 105 HOH HOH . F 6 HOH L 38 438 106 HOH HOH . F 6 HOH L 39 439 108 HOH HOH . F 6 HOH L 40 440 109 HOH HOH . F 6 HOH L 41 441 117 HOH HOH . F 6 HOH L 42 442 125 HOH HOH . F 6 HOH L 43 443 133 HOH HOH . F 6 HOH L 44 444 135 HOH HOH . F 6 HOH L 45 445 139 HOH HOH . F 6 HOH L 46 446 145 HOH HOH . F 6 HOH L 47 447 150 HOH HOH . F 6 HOH L 48 448 153 HOH HOH . F 6 HOH L 49 449 154 HOH HOH . F 6 HOH L 50 450 155 HOH HOH . F 6 HOH L 51 451 161 HOH HOH . F 6 HOH L 52 452 165 HOH HOH . F 6 HOH L 53 453 168 HOH HOH . F 6 HOH L 54 454 169 HOH HOH . F 6 HOH L 55 455 171 HOH HOH . F 6 HOH L 56 456 173 HOH HOH . F 6 HOH L 57 457 174 HOH HOH . F 6 HOH L 58 458 175 HOH HOH . F 6 HOH L 59 459 178 HOH HOH . F 6 HOH L 60 460 187 HOH HOH . F 6 HOH L 61 461 189 HOH HOH . F 6 HOH L 62 462 190 HOH HOH . F 6 HOH L 63 463 192 HOH HOH . F 6 HOH L 64 464 194 HOH HOH . F 6 HOH L 65 465 196 HOH HOH . F 6 HOH L 66 466 199 HOH HOH . F 6 HOH L 67 467 200 HOH HOH . F 6 HOH L 68 468 201 HOH HOH . F 6 HOH L 69 469 212 HOH HOH . F 6 HOH L 70 470 213 HOH HOH . F 6 HOH L 71 471 216 HOH HOH . F 6 HOH L 72 472 218 HOH HOH . F 6 HOH L 73 473 219 HOH HOH . F 6 HOH L 74 474 221 HOH HOH . F 6 HOH L 75 475 222 HOH HOH . F 6 HOH L 76 476 223 HOH HOH . F 6 HOH L 77 477 225 HOH HOH . F 6 HOH L 78 478 226 HOH HOH . F 6 HOH L 79 479 232 HOH HOH . F 6 HOH L 80 480 234 HOH HOH . G 6 HOH H 1 401 1 HOH HOH . G 6 HOH H 2 402 2 HOH HOH . G 6 HOH H 3 403 3 HOH HOH . G 6 HOH H 4 404 4 HOH HOH . G 6 HOH H 5 405 5 HOH HOH . G 6 HOH H 6 406 6 HOH HOH . G 6 HOH H 7 407 7 HOH HOH . G 6 HOH H 8 408 8 HOH HOH . G 6 HOH H 9 409 9 HOH HOH . G 6 HOH H 10 410 10 HOH HOH . G 6 HOH H 11 411 11 HOH HOH . G 6 HOH H 12 412 12 HOH HOH . G 6 HOH H 13 413 13 HOH HOH . G 6 HOH H 14 414 14 HOH HOH . G 6 HOH H 15 415 16 HOH HOH . G 6 HOH H 16 416 17 HOH HOH . G 6 HOH H 17 417 19 HOH HOH . G 6 HOH H 18 418 20 HOH HOH . G 6 HOH H 19 419 21 HOH HOH . G 6 HOH H 20 420 22 HOH HOH . G 6 HOH H 21 421 23 HOH HOH . G 6 HOH H 22 422 24 HOH HOH . G 6 HOH H 23 423 25 HOH HOH . G 6 HOH H 24 424 26 HOH HOH . G 6 HOH H 25 425 30 HOH HOH . G 6 HOH H 26 426 33 HOH HOH . G 6 HOH H 27 427 34 HOH HOH . G 6 HOH H 28 428 36 HOH HOH . G 6 HOH H 29 429 37 HOH HOH . G 6 HOH H 30 430 38 HOH HOH . G 6 HOH H 31 431 39 HOH HOH . G 6 HOH H 32 432 41 HOH HOH . G 6 HOH H 33 433 42 HOH HOH . G 6 HOH H 34 434 43 HOH HOH . G 6 HOH H 35 435 45 HOH HOH . G 6 HOH H 36 436 46 HOH HOH . G 6 HOH H 37 437 47 HOH HOH . G 6 HOH H 38 438 48 HOH HOH . G 6 HOH H 39 439 49 HOH HOH . G 6 HOH H 40 440 53 HOH HOH . G 6 HOH H 41 441 55 HOH HOH . G 6 HOH H 42 442 56 HOH HOH . G 6 HOH H 43 443 57 HOH HOH . G 6 HOH H 44 444 58 HOH HOH . G 6 HOH H 45 445 59 HOH HOH . G 6 HOH H 46 446 61 HOH HOH . G 6 HOH H 47 447 62 HOH HOH . G 6 HOH H 48 448 63 HOH HOH . G 6 HOH H 49 449 64 HOH HOH . G 6 HOH H 50 450 65 HOH HOH . G 6 HOH H 51 451 67 HOH HOH . G 6 HOH H 52 452 70 HOH HOH . G 6 HOH H 53 453 75 HOH HOH . G 6 HOH H 54 454 77 HOH HOH . G 6 HOH H 55 455 81 HOH HOH . G 6 HOH H 56 456 82 HOH HOH . G 6 HOH H 57 457 84 HOH HOH . G 6 HOH H 58 458 85 HOH HOH . G 6 HOH H 59 459 87 HOH HOH . G 6 HOH H 60 460 88 HOH HOH . G 6 HOH H 61 461 89 HOH HOH . G 6 HOH H 62 462 90 HOH HOH . G 6 HOH H 63 463 92 HOH HOH . G 6 HOH H 64 464 93 HOH HOH . G 6 HOH H 65 465 100 HOH HOH . G 6 HOH H 66 466 101 HOH HOH . G 6 HOH H 67 467 103 HOH HOH . G 6 HOH H 68 468 104 HOH HOH . G 6 HOH H 69 469 107 HOH HOH . G 6 HOH H 70 470 110 HOH HOH . G 6 HOH H 71 471 111 HOH HOH . G 6 HOH H 72 472 112 HOH HOH . G 6 HOH H 73 473 113 HOH HOH . G 6 HOH H 74 474 114 HOH HOH . G 6 HOH H 75 475 115 HOH HOH . G 6 HOH H 76 476 116 HOH HOH . G 6 HOH H 77 477 118 HOH HOH . G 6 HOH H 78 478 119 HOH HOH . G 6 HOH H 79 479 120 HOH HOH . G 6 HOH H 80 480 121 HOH HOH . G 6 HOH H 81 481 122 HOH HOH . G 6 HOH H 82 482 123 HOH HOH . G 6 HOH H 83 483 124 HOH HOH . G 6 HOH H 84 484 126 HOH HOH . G 6 HOH H 85 485 127 HOH HOH . G 6 HOH H 86 486 128 HOH HOH . G 6 HOH H 87 487 129 HOH HOH . G 6 HOH H 88 488 130 HOH HOH . G 6 HOH H 89 489 131 HOH HOH . G 6 HOH H 90 490 132 HOH HOH . G 6 HOH H 91 491 134 HOH HOH . G 6 HOH H 92 492 136 HOH HOH . G 6 HOH H 93 493 137 HOH HOH . G 6 HOH H 94 494 138 HOH HOH . G 6 HOH H 95 495 140 HOH HOH . G 6 HOH H 96 496 141 HOH HOH . G 6 HOH H 97 497 142 HOH HOH . G 6 HOH H 98 498 143 HOH HOH . G 6 HOH H 99 499 144 HOH HOH . G 6 HOH H 100 500 146 HOH HOH . G 6 HOH H 101 501 147 HOH HOH . G 6 HOH H 102 502 148 HOH HOH . G 6 HOH H 103 503 149 HOH HOH . G 6 HOH H 104 504 151 HOH HOH . G 6 HOH H 105 505 152 HOH HOH . G 6 HOH H 106 506 156 HOH HOH . G 6 HOH H 107 507 157 HOH HOH . G 6 HOH H 108 508 158 HOH HOH . G 6 HOH H 109 509 159 HOH HOH . G 6 HOH H 110 510 160 HOH HOH . G 6 HOH H 111 511 162 HOH HOH . G 6 HOH H 112 512 163 HOH HOH . G 6 HOH H 113 513 164 HOH HOH . G 6 HOH H 114 514 166 HOH HOH . G 6 HOH H 115 515 167 HOH HOH . G 6 HOH H 116 516 170 HOH HOH . G 6 HOH H 117 517 172 HOH HOH . G 6 HOH H 118 518 176 HOH HOH . G 6 HOH H 119 519 177 HOH HOH . G 6 HOH H 120 520 179 HOH HOH . G 6 HOH H 121 521 180 HOH HOH . G 6 HOH H 122 522 181 HOH HOH . G 6 HOH H 123 523 182 HOH HOH . G 6 HOH H 124 524 183 HOH HOH . G 6 HOH H 125 525 184 HOH HOH . G 6 HOH H 126 526 185 HOH HOH . G 6 HOH H 127 527 186 HOH HOH . G 6 HOH H 128 528 188 HOH HOH . G 6 HOH H 129 529 191 HOH HOH . G 6 HOH H 130 530 193 HOH HOH . G 6 HOH H 131 531 195 HOH HOH . G 6 HOH H 132 532 197 HOH HOH . G 6 HOH H 133 533 198 HOH HOH . G 6 HOH H 134 534 202 HOH HOH . G 6 HOH H 135 535 203 HOH HOH . G 6 HOH H 136 536 204 HOH HOH . G 6 HOH H 137 537 205 HOH HOH . G 6 HOH H 138 538 206 HOH HOH . G 6 HOH H 139 539 207 HOH HOH . G 6 HOH H 140 540 208 HOH HOH . G 6 HOH H 141 541 209 HOH HOH . G 6 HOH H 142 542 210 HOH HOH . G 6 HOH H 143 543 211 HOH HOH . G 6 HOH H 144 544 214 HOH HOH . G 6 HOH H 145 545 215 HOH HOH . G 6 HOH H 146 546 217 HOH HOH . G 6 HOH H 147 547 220 HOH HOH . G 6 HOH H 148 548 224 HOH HOH . G 6 HOH H 149 549 227 HOH HOH . G 6 HOH H 150 550 228 HOH HOH . G 6 HOH H 151 551 229 HOH HOH . G 6 HOH H 152 552 230 HOH HOH . G 6 HOH H 153 553 231 HOH HOH . G 6 HOH H 154 554 233 HOH HOH . G 6 HOH H 155 555 235 HOH HOH . G 6 HOH H 156 556 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 5 -14.023 -12.637 -12.381 1 66.04 ? C1 PEG 301 H 1 HETATM 2 O O1 PEG . . . E 5 -15.081 -13.508 -12.797 1 58.68 ? O1 PEG 301 H 1 HETATM 3 C C2 PEG . . . E 5 -12.787 -13.459 -12.031 1 114.6 ? C2 PEG 301 H 1 HETATM 4 O O2 PEG . . . E 5 -12.657 -13.587 -10.611 1 51 ? O2 PEG 301 H 1 HETATM 5 C C3 PEG . . . E 5 -11.5 -12.926 -10.088 1 64.97 ? C3 PEG 301 H 1 HETATM 6 C C4 PEG . . . E 5 -10.3 -13.871 -10.056 1 61.09 ? C4 PEG 301 H 1 HETATM 7 O O4 PEG . . . E 5 -10.291 -14.6 -8.822 1 44.11 ? O4 PEG 301 H 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #