data_4M6O # _model_server_result.job_id v1tKvBgRCSSFN4B1L9J2EA _model_server_result.datetime_utc '2024-10-10 19:21:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m6o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4M6O # _exptl.entry_id 4M6O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M6O _cell.length_a 152.6 _cell.length_b 152.6 _cell.length_c 152.6 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 134 L CYS 134 1_555 A SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 A SG CYS 214 L CYS 214 1_555 B SG CYS 226 H CYS 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf5 B SG CYS 150 H CYS 150 1_555 B SG CYS 206 H CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 B NE2 HIS 56 H HIS 56 1_555 G NI NI . H NI 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc2 B NE2 HIS 228 H HIS 228 1_555 F NI NI . H NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc3 B NE2 HIS 229 H HIS 229 1_555 F NI NI . H NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 218 n n O1 C6 MES sing 219 n n C2 C3 MES sing 220 n n C2 H21 MES sing 221 n n C2 H22 MES sing 222 n n C3 N4 MES sing 223 n n C3 H31 MES sing 224 n n C3 H32 MES sing 225 n n N4 C5 MES sing 226 n n N4 C7 MES sing 227 n n N4 HN4 MES sing 228 n n C5 C6 MES sing 229 n n C5 H51 MES sing 230 n n C5 H52 MES sing 231 n n C6 H61 MES sing 232 n n C6 H62 MES sing 233 n n C7 C8 MES sing 234 n n C7 H71 MES sing 235 n n C7 H72 MES sing 236 n n C8 S MES sing 237 n n C8 H81 MES sing 238 n n C8 H82 MES sing 239 n n S O1S MES doub 240 n n S O2S MES doub 241 n n S O3S MES sing 242 n n # _atom_sites.entry_id 4M6O _atom_sites.fract_transf_matrix[1][1] 0.006553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006553 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MES L 1 301 301 MES MES . D 4 SO4 H 1 301 302 SO4 SO4 . E 4 SO4 H 1 302 303 SO4 SO4 . F 5 NI H 1 303 304 NI NI . G 5 NI H 1 304 305 NI NI . H 6 HOH L 1 401 3 HOH HOH . H 6 HOH L 2 402 5 HOH HOH . H 6 HOH L 3 403 6 HOH HOH . H 6 HOH L 4 404 7 HOH HOH . H 6 HOH L 5 405 8 HOH HOH . H 6 HOH L 6 406 9 HOH HOH . H 6 HOH L 7 407 10 HOH HOH . H 6 HOH L 8 408 12 HOH HOH . H 6 HOH L 9 409 13 HOH HOH . H 6 HOH L 10 410 14 HOH HOH . H 6 HOH L 11 411 16 HOH HOH . H 6 HOH L 12 412 18 HOH HOH . H 6 HOH L 13 413 20 HOH HOH . H 6 HOH L 14 414 21 HOH HOH . H 6 HOH L 15 415 22 HOH HOH . H 6 HOH L 16 416 25 HOH HOH . H 6 HOH L 17 417 27 HOH HOH . H 6 HOH L 18 418 33 HOH HOH . H 6 HOH L 19 419 34 HOH HOH . I 6 HOH H 1 401 1 HOH HOH . I 6 HOH H 2 402 2 HOH HOH . I 6 HOH H 3 403 4 HOH HOH . I 6 HOH H 4 404 11 HOH HOH . I 6 HOH H 5 405 15 HOH HOH . I 6 HOH H 6 406 17 HOH HOH . I 6 HOH H 7 407 19 HOH HOH . I 6 HOH H 8 408 23 HOH HOH . I 6 HOH H 9 409 24 HOH HOH . I 6 HOH H 10 410 26 HOH HOH . I 6 HOH H 11 411 28 HOH HOH . I 6 HOH H 12 412 29 HOH HOH . I 6 HOH H 13 413 30 HOH HOH . I 6 HOH H 14 414 31 HOH HOH . I 6 HOH H 15 415 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . C 3 5.629 -6.014 24.728 1 75.98 ? O1 MES 301 L 1 HETATM 2 C C2 MES . . . C 3 7.045 -6.006 24.887 1 60.43 ? C2 MES 301 L 1 HETATM 3 C C3 MES . . . C 3 7.647 -7.351 24.473 1 60.37 ? C3 MES 301 L 1 HETATM 4 N N4 MES . . . C 3 6.726 -8.495 24.643 1 63.46 ? N4 MES 301 L 1 HETATM 5 C C5 MES . . . C 3 5.301 -8.392 24.985 1 59.17 ? C5 MES 301 L 1 HETATM 6 C C6 MES . . . C 3 5.001 -7.004 25.545 1 63.74 ? C6 MES 301 L 1 HETATM 7 C C7 MES . . . C 3 7.249 -9.849 24.455 1 38.99 ? C7 MES 301 L 1 HETATM 8 C C8 MES . . . C 3 8.413 -10.045 25.422 1 39.59 ? C8 MES 301 L 1 HETATM 9 S S MES . . . C 3 8.534 -11.638 25.909 1 38.89 ? S MES 301 L 1 HETATM 10 O O1S MES . . . C 3 8.82 -12.468 24.735 1 38.06 ? O1S MES 301 L 1 HETATM 11 O O2S MES . . . C 3 7.297 -12.105 26.578 1 60.95 ? O2S MES 301 L 1 HETATM 12 O O3S MES . . . C 3 9.678 -11.811 26.817 1 42.37 ? O3S MES 301 L 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #