data_4M7X # _model_server_result.job_id Zvqfbr4AZyRuW1seuUiBuw _model_server_result.datetime_utc '2024-10-10 15:20:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":315}' # _entry.id 4M7X # _exptl.entry_id 4M7X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 396.416 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-heptyl-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4M7X _cell.length_a 56.92 _cell.length_b 136.53 _cell.length_c 73.62 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O2B ADP . A ADP 301 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc2 C MG MG . A MG 302 1_555 P OAF 27Q . A 27Q 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.944 ? metalc ? metalc3 C MG MG . A MG 302 1_555 Q O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc4 C MG MG . A MG 302 1_555 Q O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc5 C MG MG . A MG 302 1_555 Q O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc6 C MG MG . A MG 302 1_555 Q O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? # _chem_comp.formula 'C16 H33 N2 O7 P' _chem_comp.formula_weight 396.416 _chem_comp.id 27Q _chem_comp.mon_nstd_flag . _chem_comp.name N-heptyl-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAF PAX 27Q doub 1 n n OAI PAX 27Q sing 2 n n PAX OAH 27Q sing 3 n n PAX OAS 27Q sing 4 n n OAG CAV 27Q sing 5 n n CAV CAU 27Q sing 6 n n CAV CAW 27Q sing 7 n n OAS CAP 27Q sing 8 n n OAE CAU 27Q doub 9 n n CAU NAR 27Q sing 10 n n NAR CAN 27Q sing 11 n n CAN CAO 27Q sing 12 n n CAP CAW 27Q sing 13 n n CAW CAB 27Q sing 14 n n CAW CAC 27Q sing 15 n n OAD CAT 27Q doub 16 n n CAO CAT 27Q sing 17 n n CAT NAQ 27Q sing 18 n n NAQ CAM 27Q sing 19 n n CAM CAL 27Q sing 20 n n CAL CAK 27Q sing 21 n n CAK CAJ 27Q sing 22 n n CAJ CAA 27Q sing 23 n n CAA CAY 27Q sing 24 n n CAY CAZ 27Q sing 25 n n OAH H1 27Q sing 26 n n OAI H2 27Q sing 27 n n CAP H3 27Q sing 28 n n CAP H4 27Q sing 29 n n CAB H5 27Q sing 30 n n CAB H6 27Q sing 31 n n CAB H7 27Q sing 32 n n CAC H8 27Q sing 33 n n CAC H9 27Q sing 34 n n CAC H10 27Q sing 35 n n CAV H11 27Q sing 36 n n OAG H12 27Q sing 37 n n NAR H13 27Q sing 38 n n CAN H14 27Q sing 39 n n CAN H15 27Q sing 40 n n CAO H16 27Q sing 41 n n CAO H17 27Q sing 42 n n NAQ H18 27Q sing 43 n n CAM H19 27Q sing 44 n n CAM H20 27Q sing 45 n n CAL H21 27Q sing 46 n n CAL H22 27Q sing 47 n n CAK H23 27Q sing 48 n n CAK H24 27Q sing 49 n n CAJ H25 27Q sing 50 n n CAJ H26 27Q sing 51 n n CAA H27 27Q sing 52 n n CAA H28 27Q sing 53 n n CAY H29 27Q sing 54 n n CAY H30 27Q sing 55 n n CAZ H31 27Q sing 56 n n CAZ H32 27Q sing 57 n n CAZ H33 27Q sing 58 n n # _atom_sites.entry_id 4M7X _atom_sites.fract_transf_matrix[1][1] 0.017569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013583 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 301 1 ADP ADP . C 3 MG A 1 302 1 MG MG . D 4 UNX A 1 303 2 UNX UNX . E 4 UNX A 1 304 3 UNX UNX . F 4 UNX A 1 305 4 UNX UNX . G 4 UNX A 1 306 5 UNX UNX . H 4 UNX A 1 307 6 UNX UNX . I 4 UNX A 1 308 7 UNX UNX . J 4 UNX A 1 309 8 UNX UNX . K 4 UNX A 1 310 9 UNX UNX . L 4 UNX A 1 311 10 UNX UNX . M 4 UNX A 1 312 11 UNX UNX . N 4 UNX A 1 313 12 UNX UNX . O 4 UNX A 1 314 13 UNX UNX . P 5 27Q A 1 315 374 27Q 27Q . Q 6 HOH A 1 401 1 HOH HOH . Q 6 HOH A 2 402 2 HOH HOH . Q 6 HOH A 3 403 3 HOH HOH . Q 6 HOH A 4 404 4 HOH HOH . Q 6 HOH A 5 405 5 HOH HOH . Q 6 HOH A 6 406 6 HOH HOH . Q 6 HOH A 7 407 7 HOH HOH . Q 6 HOH A 8 408 8 HOH HOH . Q 6 HOH A 9 409 9 HOH HOH . Q 6 HOH A 10 410 12 HOH HOH . Q 6 HOH A 11 411 13 HOH HOH . Q 6 HOH A 12 412 14 HOH HOH . Q 6 HOH A 13 413 16 HOH HOH . Q 6 HOH A 14 414 17 HOH HOH . Q 6 HOH A 15 415 18 HOH HOH . Q 6 HOH A 16 416 19 HOH HOH . Q 6 HOH A 17 417 20 HOH HOH . Q 6 HOH A 18 418 21 HOH HOH . Q 6 HOH A 19 419 22 HOH HOH . Q 6 HOH A 20 420 25 HOH HOH . Q 6 HOH A 21 421 26 HOH HOH . Q 6 HOH A 22 422 27 HOH HOH . Q 6 HOH A 23 423 28 HOH HOH . Q 6 HOH A 24 424 29 HOH HOH . Q 6 HOH A 25 425 30 HOH HOH . Q 6 HOH A 26 426 31 HOH HOH . Q 6 HOH A 27 427 32 HOH HOH . Q 6 HOH A 28 428 33 HOH HOH . Q 6 HOH A 29 429 34 HOH HOH . Q 6 HOH A 30 430 35 HOH HOH . Q 6 HOH A 31 431 36 HOH HOH . Q 6 HOH A 32 432 37 HOH HOH . Q 6 HOH A 33 433 38 HOH HOH . Q 6 HOH A 34 434 40 HOH HOH . Q 6 HOH A 35 435 42 HOH HOH . Q 6 HOH A 36 436 43 HOH HOH . Q 6 HOH A 37 437 44 HOH HOH . Q 6 HOH A 38 438 45 HOH HOH . Q 6 HOH A 39 439 47 HOH HOH . Q 6 HOH A 40 440 48 HOH HOH . Q 6 HOH A 41 441 49 HOH HOH . Q 6 HOH A 42 442 50 HOH HOH . Q 6 HOH A 43 443 51 HOH HOH . Q 6 HOH A 44 444 53 HOH HOH . Q 6 HOH A 45 445 54 HOH HOH . Q 6 HOH A 46 446 56 HOH HOH . Q 6 HOH A 47 447 57 HOH HOH . Q 6 HOH A 48 448 58 HOH HOH . Q 6 HOH A 49 449 59 HOH HOH . Q 6 HOH A 50 450 60 HOH HOH . Q 6 HOH A 51 451 61 HOH HOH . Q 6 HOH A 52 452 62 HOH HOH . Q 6 HOH A 53 453 63 HOH HOH . Q 6 HOH A 54 454 64 HOH HOH . Q 6 HOH A 55 455 65 HOH HOH . Q 6 HOH A 56 456 66 HOH HOH . Q 6 HOH A 57 457 68 HOH HOH . Q 6 HOH A 58 458 69 HOH HOH . Q 6 HOH A 59 459 70 HOH HOH . Q 6 HOH A 60 460 71 HOH HOH . Q 6 HOH A 61 461 72 HOH HOH . Q 6 HOH A 62 462 73 HOH HOH . Q 6 HOH A 63 463 74 HOH HOH . Q 6 HOH A 64 464 75 HOH HOH . Q 6 HOH A 65 465 76 HOH HOH . Q 6 HOH A 66 466 77 HOH HOH . Q 6 HOH A 67 467 78 HOH HOH . Q 6 HOH A 68 468 79 HOH HOH . Q 6 HOH A 69 469 80 HOH HOH . Q 6 HOH A 70 470 81 HOH HOH . Q 6 HOH A 71 471 82 HOH HOH . Q 6 HOH A 72 472 83 HOH HOH . Q 6 HOH A 73 473 84 HOH HOH . Q 6 HOH A 74 474 86 HOH HOH . Q 6 HOH A 75 475 87 HOH HOH . Q 6 HOH A 76 476 88 HOH HOH . Q 6 HOH A 77 477 89 HOH HOH . Q 6 HOH A 78 478 90 HOH HOH . Q 6 HOH A 79 479 91 HOH HOH . Q 6 HOH A 80 480 92 HOH HOH . Q 6 HOH A 81 481 93 HOH HOH . Q 6 HOH A 82 482 94 HOH HOH . Q 6 HOH A 83 483 95 HOH HOH . Q 6 HOH A 84 484 96 HOH HOH . Q 6 HOH A 85 485 98 HOH HOH . Q 6 HOH A 86 486 99 HOH HOH . Q 6 HOH A 87 487 100 HOH HOH . Q 6 HOH A 88 488 101 HOH HOH . Q 6 HOH A 89 489 103 HOH HOH . Q 6 HOH A 90 490 104 HOH HOH . Q 6 HOH A 91 491 106 HOH HOH . Q 6 HOH A 92 492 107 HOH HOH . Q 6 HOH A 93 493 109 HOH HOH . Q 6 HOH A 94 494 111 HOH HOH . Q 6 HOH A 95 495 113 HOH HOH . Q 6 HOH A 96 496 114 HOH HOH . Q 6 HOH A 97 497 115 HOH HOH . Q 6 HOH A 98 498 117 HOH HOH . Q 6 HOH A 99 499 118 HOH HOH . Q 6 HOH A 100 500 120 HOH HOH . Q 6 HOH A 101 501 121 HOH HOH . Q 6 HOH A 102 502 125 HOH HOH . Q 6 HOH A 103 503 126 HOH HOH . Q 6 HOH A 104 504 127 HOH HOH . Q 6 HOH A 105 505 128 HOH HOH . Q 6 HOH A 106 506 129 HOH HOH . Q 6 HOH A 107 507 130 HOH HOH . Q 6 HOH A 108 508 132 HOH HOH . Q 6 HOH A 109 509 133 HOH HOH . Q 6 HOH A 110 510 135 HOH HOH . Q 6 HOH A 111 511 136 HOH HOH . Q 6 HOH A 112 512 137 HOH HOH . Q 6 HOH A 113 513 139 HOH HOH . Q 6 HOH A 114 514 140 HOH HOH . Q 6 HOH A 115 515 141 HOH HOH . Q 6 HOH A 116 516 143 HOH HOH . Q 6 HOH A 117 517 146 HOH HOH . Q 6 HOH A 118 518 147 HOH HOH . Q 6 HOH A 119 519 148 HOH HOH . Q 6 HOH A 120 520 149 HOH HOH . Q 6 HOH A 121 521 151 HOH HOH . Q 6 HOH A 122 522 152 HOH HOH . Q 6 HOH A 123 523 153 HOH HOH . Q 6 HOH A 124 524 154 HOH HOH . Q 6 HOH A 125 525 155 HOH HOH . Q 6 HOH A 126 526 156 HOH HOH . Q 6 HOH A 127 527 157 HOH HOH . Q 6 HOH A 128 528 158 HOH HOH . Q 6 HOH A 129 529 159 HOH HOH . Q 6 HOH A 130 530 160 HOH HOH . Q 6 HOH A 131 531 161 HOH HOH . Q 6 HOH A 132 532 162 HOH HOH . Q 6 HOH A 133 533 164 HOH HOH . Q 6 HOH A 134 534 165 HOH HOH . Q 6 HOH A 135 535 166 HOH HOH . Q 6 HOH A 136 536 167 HOH HOH . Q 6 HOH A 137 537 168 HOH HOH . Q 6 HOH A 138 538 169 HOH HOH . Q 6 HOH A 139 539 170 HOH HOH . Q 6 HOH A 140 540 171 HOH HOH . Q 6 HOH A 141 541 172 HOH HOH . Q 6 HOH A 142 542 173 HOH HOH . Q 6 HOH A 143 543 174 HOH HOH . Q 6 HOH A 144 544 175 HOH HOH . Q 6 HOH A 145 545 176 HOH HOH . Q 6 HOH A 146 546 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAH 27Q . . . P 5 18.962 16.818 5.298 1 28.4 ? OAH 27Q 315 A 1 HETATM 2 P PAX 27Q . . . P 5 17.814 16.028 4.649 1 30.57 ? PAX 27Q 315 A 1 HETATM 3 O OAI 27Q . . . P 5 18.166 14.577 3.902 1 21.74 ? OAI 27Q 315 A 1 HETATM 4 O OAF 27Q . . . P 5 17.168 16.99 3.673 1 27.44 ? OAF 27Q 315 A 1 HETATM 5 O OAS 27Q . . . P 5 16.645 15.703 5.756 1 24.61 ? OAS 27Q 315 A 1 HETATM 6 C CAP 27Q . . . P 5 16.879 15.051 6.937 1 21.41 ? CAP 27Q 315 A 1 HETATM 7 C CAW 27Q . . . P 5 16.025 13.76 7.014 1 21.88 ? CAW 27Q 315 A 1 HETATM 8 C CAB 27Q . . . P 5 14.527 14.122 7.12 1 22.4 ? CAB 27Q 315 A 1 HETATM 9 C CAC 27Q . . . P 5 16.494 13.011 8.253 1 22.18 ? CAC 27Q 315 A 1 HETATM 10 C CAV 27Q . . . P 5 16.304 12.85 5.754 1 18.73 ? CAV 27Q 315 A 1 HETATM 11 O OAG 27Q . . . P 5 17.726 12.634 5.561 1 19.91 ? OAG 27Q 315 A 1 HETATM 12 C CAU 27Q . . . P 5 15.65 11.487 5.886 1 16.9 ? CAU 27Q 315 A 1 HETATM 13 O OAE 27Q . . . P 5 14.413 11.371 5.846 1 18.06 ? OAE 27Q 315 A 1 HETATM 14 N NAR 27Q . . . P 5 16.467 10.446 6.052 1 15.72 ? NAR 27Q 315 A 1 HETATM 15 C CAN 27Q . . . P 5 15.997 9.094 6.149 1 16.81 ? CAN 27Q 315 A 1 HETATM 16 C CAO 27Q . . . P 5 15.463 8.852 7.609 1 17.45 ? CAO 27Q 315 A 1 HETATM 17 C CAT 27Q . . . P 5 14.76 7.514 7.674 1 17.91 ? CAT 27Q 315 A 1 HETATM 18 O OAD 27Q . . . P 5 13.588 7.403 7.37 1 18.92 ? OAD 27Q 315 A 1 HETATM 19 N NAQ 27Q . . . P 5 15.494 6.465 7.997 1 20.26 ? NAQ 27Q 315 A 1 HETATM 20 C CAM 27Q . . . P 5 14.9 5.124 8 1 24.03 ? CAM 27Q 315 A 1 HETATM 21 C CAL 27Q . A . P 5 15.915 4.046 8.226 0.5 24.5 ? CAL 27Q 315 A 1 HETATM 22 C CAL 27Q . B . P 5 16.05 4.155 8.359 0.5 25.9 ? CAL 27Q 315 A 1 HETATM 23 C CAK 27Q . A . P 5 16.256 4.116 9.66 0.5 25.27 ? CAK 27Q 315 A 1 HETATM 24 C CAK 27Q . B . P 5 15.556 2.727 8.551 0.5 27.35 ? CAK 27Q 315 A 1 HETATM 25 C CAJ 27Q . A . P 5 15.77 2.835 10.284 0.5 28.09 ? CAJ 27Q 315 A 1 HETATM 26 C CAJ 27Q . B . P 5 16.169 2.093 9.815 0.5 27.2 ? CAJ 27Q 315 A 1 HETATM 27 C CAA 27Q . A . P 5 17.019 2.366 10.952 0.5 28.6 ? CAA 27Q 315 A 1 HETATM 28 C CAA 27Q . B . P 5 16.843 3.119 10.704 0.5 29.41 ? CAA 27Q 315 A 1 HETATM 29 C CAY 27Q . A . P 5 16.618 1.623 12.189 0.5 30.88 ? CAY 27Q 315 A 1 HETATM 30 C CAY 27Q . B . P 5 16.765 2.645 12.152 0.5 29.94 ? CAY 27Q 315 A 1 HETATM 31 C CAZ 27Q . A . P 5 17.7 1.97 13.217 0.5 32.49 ? CAZ 27Q 315 A 1 HETATM 32 C CAZ 27Q . B . P 5 18.077 2.906 12.847 0.5 33.01 ? CAZ 27Q 315 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #