data_4M83 # _model_server_result.job_id lYQwgYoAS9MMs7VlNsISKg _model_server_result.datetime_utc '2024-11-24 00:03:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4m83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1401}' # _entry.id 4M83 # _exptl.entry_id 4M83 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.42 _cell.angle_gamma 90 _cell.entry_id 4M83 _cell.length_a 72.718 _cell.length_b 65.778 _cell.length_c 91.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4M83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O ARG 298 B ARG 297 1_555 G MG MG . B MG 503 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.582 ? metalc ? metalc2 G MG MG . B MG 503 1_555 I O HOH . B HOH 684 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.443 ? metalc ? metalc3 G MG MG . B MG 503 1_555 I O HOH . B HOH 809 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.365 ? metalc ? metalc4 G MG MG . B MG 503 1_555 I O HOH . B HOH 830 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.116 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 478 n n N1 C6 UDP sing 479 n n N1 C1' UDP sing 480 n n C2 N3 UDP sing 481 n n C2 O2 UDP doub 482 n n N3 C4 UDP sing 483 n n N3 HN3 UDP sing 484 n n C4 C5 UDP sing 485 n n C4 O4 UDP doub 486 n n C5 C6 UDP doub 487 n n C5 H5 UDP sing 488 n n C6 H6 UDP sing 489 n n C1' C2' UDP sing 490 n n C1' O4' UDP sing 491 n n C1' H1' UDP sing 492 n n C2' O2' UDP sing 493 n n C2' C3' UDP sing 494 n n C2' H2' UDP sing 495 n n O2' HO2' UDP sing 496 n n C3' C4' UDP sing 497 n n C3' O3' UDP sing 498 n n C3' H3' UDP sing 499 n n C4' O4' UDP sing 500 n n C4' C5' UDP sing 501 n n C4' H4' UDP sing 502 n n O3' HO3' UDP sing 503 n n C5' O5' UDP sing 504 n n C5' "H5'1" UDP sing 505 n n C5' "H5'2" UDP sing 506 n n O5' PA UDP sing 507 n n PA O1A UDP doub 508 n n PA O2A UDP sing 509 n n PA O3A UDP sing 510 n n O2A HOA2 UDP sing 511 n n O3A PB UDP sing 512 n n PB O1B UDP doub 513 n n PB O2B UDP sing 514 n n PB O3B UDP sing 515 n n O2B HOB2 UDP sing 516 n n O3B HOB3 UDP sing 517 n n # _atom_sites.entry_id 4M83 _atom_sites.fract_transf_matrix[1][1] 0.013752 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002529 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011059 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ERY A 1 1400 1400 ERY ERY . D 3 UDP A 1 1401 1401 UDP UDP . E 2 ERY B 1 501 1399 ERY ERY . F 3 UDP B 1 502 1400 UDP UDP . G 4 MG B 1 503 1401 MG MG . H 5 HOH A 1 1501 1 HOH HOH . H 5 HOH A 2 1502 2 HOH HOH . H 5 HOH A 3 1503 3 HOH HOH . H 5 HOH A 4 1504 5 HOH HOH . H 5 HOH A 5 1505 6 HOH HOH . H 5 HOH A 6 1506 7 HOH HOH . H 5 HOH A 7 1507 8 HOH HOH . H 5 HOH A 8 1508 9 HOH HOH . H 5 HOH A 9 1509 10 HOH HOH . H 5 HOH A 10 1510 11 HOH HOH . H 5 HOH A 11 1511 12 HOH HOH . H 5 HOH A 12 1512 13 HOH HOH . H 5 HOH A 13 1513 14 HOH HOH . H 5 HOH A 14 1514 15 HOH HOH . H 5 HOH A 15 1515 16 HOH HOH . H 5 HOH A 16 1516 17 HOH HOH . H 5 HOH A 17 1517 18 HOH HOH . H 5 HOH A 18 1518 20 HOH HOH . H 5 HOH A 19 1519 21 HOH HOH . H 5 HOH A 20 1520 22 HOH HOH . H 5 HOH A 21 1521 23 HOH HOH . H 5 HOH A 22 1522 25 HOH HOH . H 5 HOH A 23 1523 26 HOH HOH . H 5 HOH A 24 1524 27 HOH HOH . H 5 HOH A 25 1525 28 HOH HOH . H 5 HOH A 26 1526 31 HOH HOH . H 5 HOH A 27 1527 32 HOH HOH . H 5 HOH A 28 1528 33 HOH HOH . H 5 HOH A 29 1529 34 HOH HOH . H 5 HOH A 30 1530 35 HOH HOH . H 5 HOH A 31 1531 40 HOH HOH . H 5 HOH A 32 1532 42 HOH HOH . H 5 HOH A 33 1533 43 HOH HOH . H 5 HOH A 34 1534 44 HOH HOH . H 5 HOH A 35 1535 45 HOH HOH . H 5 HOH A 36 1536 46 HOH HOH . H 5 HOH A 37 1537 54 HOH HOH . H 5 HOH A 38 1538 55 HOH HOH . H 5 HOH A 39 1539 59 HOH HOH . H 5 HOH A 40 1540 66 HOH HOH . H 5 HOH A 41 1541 70 HOH HOH . H 5 HOH A 42 1542 74 HOH HOH . H 5 HOH A 43 1543 80 HOH HOH . H 5 HOH A 44 1544 82 HOH HOH . H 5 HOH A 45 1545 83 HOH HOH . H 5 HOH A 46 1546 84 HOH HOH . H 5 HOH A 47 1547 85 HOH HOH . H 5 HOH A 48 1548 88 HOH HOH . H 5 HOH A 49 1549 91 HOH HOH . H 5 HOH A 50 1550 92 HOH HOH . H 5 HOH A 51 1551 94 HOH HOH . H 5 HOH A 52 1552 99 HOH HOH . H 5 HOH A 53 1553 100 HOH HOH . H 5 HOH A 54 1554 101 HOH HOH . H 5 HOH A 55 1555 102 HOH HOH . H 5 HOH A 56 1556 103 HOH HOH . H 5 HOH A 57 1557 105 HOH HOH . H 5 HOH A 58 1558 107 HOH HOH . H 5 HOH A 59 1559 111 HOH HOH . H 5 HOH A 60 1560 113 HOH HOH . H 5 HOH A 61 1561 114 HOH HOH . H 5 HOH A 62 1562 115 HOH HOH . H 5 HOH A 63 1563 117 HOH HOH . H 5 HOH A 64 1564 118 HOH HOH . H 5 HOH A 65 1565 124 HOH HOH . H 5 HOH A 66 1566 130 HOH HOH . H 5 HOH A 67 1567 132 HOH HOH . H 5 HOH A 68 1568 133 HOH HOH . H 5 HOH A 69 1569 134 HOH HOH . H 5 HOH A 70 1570 135 HOH HOH . H 5 HOH A 71 1571 136 HOH HOH . H 5 HOH A 72 1572 140 HOH HOH . H 5 HOH A 73 1573 141 HOH HOH . H 5 HOH A 74 1574 145 HOH HOH . H 5 HOH A 75 1575 146 HOH HOH . H 5 HOH A 76 1576 147 HOH HOH . H 5 HOH A 77 1577 150 HOH HOH . H 5 HOH A 78 1578 153 HOH HOH . H 5 HOH A 79 1579 154 HOH HOH . H 5 HOH A 80 1580 155 HOH HOH . H 5 HOH A 81 1581 158 HOH HOH . H 5 HOH A 82 1582 159 HOH HOH . H 5 HOH A 83 1583 161 HOH HOH . H 5 HOH A 84 1584 162 HOH HOH . H 5 HOH A 85 1585 164 HOH HOH . H 5 HOH A 86 1586 165 HOH HOH . H 5 HOH A 87 1587 166 HOH HOH . H 5 HOH A 88 1588 167 HOH HOH . H 5 HOH A 89 1589 168 HOH HOH . H 5 HOH A 90 1590 171 HOH HOH . H 5 HOH A 91 1591 172 HOH HOH . H 5 HOH A 92 1592 174 HOH HOH . H 5 HOH A 93 1593 175 HOH HOH . H 5 HOH A 94 1594 177 HOH HOH . H 5 HOH A 95 1595 178 HOH HOH . H 5 HOH A 96 1596 180 HOH HOH . H 5 HOH A 97 1597 183 HOH HOH . H 5 HOH A 98 1598 184 HOH HOH . H 5 HOH A 99 1599 185 HOH HOH . H 5 HOH A 100 1600 187 HOH HOH . H 5 HOH A 101 1601 188 HOH HOH . H 5 HOH A 102 1602 189 HOH HOH . H 5 HOH A 103 1603 193 HOH HOH . H 5 HOH A 104 1604 195 HOH HOH . H 5 HOH A 105 1605 197 HOH HOH . H 5 HOH A 106 1606 199 HOH HOH . H 5 HOH A 107 1607 201 HOH HOH . H 5 HOH A 108 1608 204 HOH HOH . H 5 HOH A 109 1609 205 HOH HOH . H 5 HOH A 110 1610 206 HOH HOH . H 5 HOH A 111 1611 210 HOH HOH . H 5 HOH A 112 1612 211 HOH HOH . H 5 HOH A 113 1613 212 HOH HOH . H 5 HOH A 114 1614 213 HOH HOH . H 5 HOH A 115 1615 214 HOH HOH . H 5 HOH A 116 1616 215 HOH HOH . H 5 HOH A 117 1617 216 HOH HOH . H 5 HOH A 118 1618 221 HOH HOH . H 5 HOH A 119 1619 222 HOH HOH . H 5 HOH A 120 1620 226 HOH HOH . H 5 HOH A 121 1621 227 HOH HOH . H 5 HOH A 122 1622 232 HOH HOH . H 5 HOH A 123 1623 234 HOH HOH . H 5 HOH A 124 1624 236 HOH HOH . H 5 HOH A 125 1625 237 HOH HOH . H 5 HOH A 126 1626 238 HOH HOH . H 5 HOH A 127 1627 242 HOH HOH . H 5 HOH A 128 1628 243 HOH HOH . H 5 HOH A 129 1629 244 HOH HOH . H 5 HOH A 130 1630 246 HOH HOH . H 5 HOH A 131 1631 248 HOH HOH . H 5 HOH A 132 1632 249 HOH HOH . H 5 HOH A 133 1633 253 HOH HOH . H 5 HOH A 134 1634 254 HOH HOH . H 5 HOH A 135 1635 256 HOH HOH . H 5 HOH A 136 1636 258 HOH HOH . H 5 HOH A 137 1637 260 HOH HOH . H 5 HOH A 138 1638 262 HOH HOH . H 5 HOH A 139 1639 266 HOH HOH . H 5 HOH A 140 1640 268 HOH HOH . H 5 HOH A 141 1641 270 HOH HOH . H 5 HOH A 142 1642 271 HOH HOH . H 5 HOH A 143 1643 272 HOH HOH . H 5 HOH A 144 1644 274 HOH HOH . H 5 HOH A 145 1645 275 HOH HOH . H 5 HOH A 146 1646 276 HOH HOH . H 5 HOH A 147 1647 278 HOH HOH . H 5 HOH A 148 1648 279 HOH HOH . H 5 HOH A 149 1649 280 HOH HOH . H 5 HOH A 150 1650 284 HOH HOH . H 5 HOH A 151 1651 285 HOH HOH . H 5 HOH A 152 1652 290 HOH HOH . H 5 HOH A 153 1653 292 HOH HOH . H 5 HOH A 154 1654 295 HOH HOH . H 5 HOH A 155 1655 298 HOH HOH . H 5 HOH A 156 1656 299 HOH HOH . H 5 HOH A 157 1657 301 HOH HOH . H 5 HOH A 158 1658 303 HOH HOH . H 5 HOH A 159 1659 304 HOH HOH . H 5 HOH A 160 1660 305 HOH HOH . H 5 HOH A 161 1661 309 HOH HOH . H 5 HOH A 162 1662 311 HOH HOH . H 5 HOH A 163 1663 316 HOH HOH . H 5 HOH A 164 1664 317 HOH HOH . H 5 HOH A 165 1665 319 HOH HOH . H 5 HOH A 166 1666 320 HOH HOH . H 5 HOH A 167 1667 321 HOH HOH . H 5 HOH A 168 1668 324 HOH HOH . H 5 HOH A 169 1669 325 HOH HOH . H 5 HOH A 170 1670 327 HOH HOH . H 5 HOH A 171 1671 329 HOH HOH . H 5 HOH A 172 1672 330 HOH HOH . H 5 HOH A 173 1673 331 HOH HOH . H 5 HOH A 174 1674 332 HOH HOH . H 5 HOH A 175 1675 333 HOH HOH . H 5 HOH A 176 1676 334 HOH HOH . H 5 HOH A 177 1677 336 HOH HOH . H 5 HOH A 178 1678 337 HOH HOH . H 5 HOH A 179 1679 339 HOH HOH . H 5 HOH A 180 1680 342 HOH HOH . H 5 HOH A 181 1681 343 HOH HOH . H 5 HOH A 182 1682 345 HOH HOH . H 5 HOH A 183 1683 346 HOH HOH . H 5 HOH A 184 1684 347 HOH HOH . H 5 HOH A 185 1685 349 HOH HOH . H 5 HOH A 186 1686 352 HOH HOH . H 5 HOH A 187 1687 353 HOH HOH . H 5 HOH A 188 1688 355 HOH HOH . H 5 HOH A 189 1689 360 HOH HOH . H 5 HOH A 190 1690 361 HOH HOH . H 5 HOH A 191 1691 362 HOH HOH . H 5 HOH A 192 1692 363 HOH HOH . H 5 HOH A 193 1693 364 HOH HOH . H 5 HOH A 194 1694 370 HOH HOH . H 5 HOH A 195 1695 371 HOH HOH . H 5 HOH A 196 1696 372 HOH HOH . H 5 HOH A 197 1697 376 HOH HOH . H 5 HOH A 198 1698 377 HOH HOH . H 5 HOH A 199 1699 378 HOH HOH . H 5 HOH A 200 1700 381 HOH HOH . H 5 HOH A 201 1701 384 HOH HOH . H 5 HOH A 202 1702 387 HOH HOH . H 5 HOH A 203 1703 389 HOH HOH . H 5 HOH A 204 1704 392 HOH HOH . H 5 HOH A 205 1705 393 HOH HOH . H 5 HOH A 206 1706 401 HOH HOH . H 5 HOH A 207 1707 402 HOH HOH . H 5 HOH A 208 1708 403 HOH HOH . H 5 HOH A 209 1709 404 HOH HOH . H 5 HOH A 210 1710 405 HOH HOH . H 5 HOH A 211 1711 407 HOH HOH . H 5 HOH A 212 1712 408 HOH HOH . H 5 HOH A 213 1713 409 HOH HOH . H 5 HOH A 214 1714 412 HOH HOH . H 5 HOH A 215 1715 413 HOH HOH . H 5 HOH A 216 1716 416 HOH HOH . H 5 HOH A 217 1717 417 HOH HOH . H 5 HOH A 218 1718 419 HOH HOH . H 5 HOH A 219 1719 420 HOH HOH . H 5 HOH A 220 1720 424 HOH HOH . H 5 HOH A 221 1721 425 HOH HOH . H 5 HOH A 222 1722 427 HOH HOH . H 5 HOH A 223 1723 429 HOH HOH . H 5 HOH A 224 1724 430 HOH HOH . H 5 HOH A 225 1725 431 HOH HOH . H 5 HOH A 226 1726 433 HOH HOH . H 5 HOH A 227 1727 434 HOH HOH . H 5 HOH A 228 1728 435 HOH HOH . H 5 HOH A 229 1729 436 HOH HOH . H 5 HOH A 230 1730 437 HOH HOH . H 5 HOH A 231 1731 438 HOH HOH . H 5 HOH A 232 1732 439 HOH HOH . H 5 HOH A 233 1733 441 HOH HOH . H 5 HOH A 234 1734 443 HOH HOH . H 5 HOH A 235 1735 444 HOH HOH . H 5 HOH A 236 1736 449 HOH HOH . H 5 HOH A 237 1737 454 HOH HOH . H 5 HOH A 238 1738 455 HOH HOH . H 5 HOH A 239 1739 456 HOH HOH . H 5 HOH A 240 1740 458 HOH HOH . H 5 HOH A 241 1741 461 HOH HOH . H 5 HOH A 242 1742 463 HOH HOH . H 5 HOH A 243 1743 464 HOH HOH . H 5 HOH A 244 1744 465 HOH HOH . H 5 HOH A 245 1745 467 HOH HOH . H 5 HOH A 246 1746 468 HOH HOH . H 5 HOH A 247 1747 469 HOH HOH . H 5 HOH A 248 1748 471 HOH HOH . H 5 HOH A 249 1749 475 HOH HOH . H 5 HOH A 250 1750 477 HOH HOH . H 5 HOH A 251 1751 478 HOH HOH . H 5 HOH A 252 1752 479 HOH HOH . H 5 HOH A 253 1753 481 HOH HOH . H 5 HOH A 254 1754 483 HOH HOH . H 5 HOH A 255 1755 485 HOH HOH . H 5 HOH A 256 1756 488 HOH HOH . H 5 HOH A 257 1757 489 HOH HOH . H 5 HOH A 258 1758 491 HOH HOH . H 5 HOH A 259 1759 492 HOH HOH . H 5 HOH A 260 1760 494 HOH HOH . H 5 HOH A 261 1761 497 HOH HOH . H 5 HOH A 262 1762 499 HOH HOH . H 5 HOH A 263 1763 500 HOH HOH . H 5 HOH A 264 1764 501 HOH HOH . H 5 HOH A 265 1765 504 HOH HOH . H 5 HOH A 266 1766 507 HOH HOH . H 5 HOH A 267 1767 508 HOH HOH . H 5 HOH A 268 1768 509 HOH HOH . H 5 HOH A 269 1769 511 HOH HOH . H 5 HOH A 270 1770 514 HOH HOH . H 5 HOH A 271 1771 515 HOH HOH . I 5 HOH B 1 601 4 HOH HOH . I 5 HOH B 2 602 19 HOH HOH . I 5 HOH B 3 603 24 HOH HOH . I 5 HOH B 4 604 29 HOH HOH . I 5 HOH B 5 605 30 HOH HOH . I 5 HOH B 6 606 36 HOH HOH . I 5 HOH B 7 607 37 HOH HOH . I 5 HOH B 8 608 38 HOH HOH . I 5 HOH B 9 609 39 HOH HOH . I 5 HOH B 10 610 41 HOH HOH . I 5 HOH B 11 611 47 HOH HOH . I 5 HOH B 12 612 48 HOH HOH . I 5 HOH B 13 613 49 HOH HOH . I 5 HOH B 14 614 50 HOH HOH . I 5 HOH B 15 615 51 HOH HOH . I 5 HOH B 16 616 52 HOH HOH . I 5 HOH B 17 617 53 HOH HOH . I 5 HOH B 18 618 56 HOH HOH . I 5 HOH B 19 619 57 HOH HOH . I 5 HOH B 20 620 58 HOH HOH . I 5 HOH B 21 621 60 HOH HOH . I 5 HOH B 22 622 61 HOH HOH . I 5 HOH B 23 623 62 HOH HOH . I 5 HOH B 24 624 63 HOH HOH . I 5 HOH B 25 625 64 HOH HOH . I 5 HOH B 26 626 65 HOH HOH . I 5 HOH B 27 627 67 HOH HOH . I 5 HOH B 28 628 68 HOH HOH . I 5 HOH B 29 629 69 HOH HOH . I 5 HOH B 30 630 71 HOH HOH . I 5 HOH B 31 631 72 HOH HOH . I 5 HOH B 32 632 73 HOH HOH . I 5 HOH B 33 633 75 HOH HOH . I 5 HOH B 34 634 76 HOH HOH . I 5 HOH B 35 635 77 HOH HOH . I 5 HOH B 36 636 78 HOH HOH . I 5 HOH B 37 637 79 HOH HOH . I 5 HOH B 38 638 81 HOH HOH . I 5 HOH B 39 639 86 HOH HOH . I 5 HOH B 40 640 87 HOH HOH . I 5 HOH B 41 641 89 HOH HOH . I 5 HOH B 42 642 90 HOH HOH . I 5 HOH B 43 643 93 HOH HOH . I 5 HOH B 44 644 95 HOH HOH . I 5 HOH B 45 645 96 HOH HOH . I 5 HOH B 46 646 97 HOH HOH . I 5 HOH B 47 647 98 HOH HOH . I 5 HOH B 48 648 104 HOH HOH . I 5 HOH B 49 649 106 HOH HOH . I 5 HOH B 50 650 108 HOH HOH . I 5 HOH B 51 651 109 HOH HOH . I 5 HOH B 52 652 110 HOH HOH . I 5 HOH B 53 653 112 HOH HOH . I 5 HOH B 54 654 116 HOH HOH . I 5 HOH B 55 655 119 HOH HOH . I 5 HOH B 56 656 120 HOH HOH . I 5 HOH B 57 657 121 HOH HOH . I 5 HOH B 58 658 122 HOH HOH . I 5 HOH B 59 659 123 HOH HOH . I 5 HOH B 60 660 125 HOH HOH . I 5 HOH B 61 661 126 HOH HOH . I 5 HOH B 62 662 127 HOH HOH . I 5 HOH B 63 663 128 HOH HOH . I 5 HOH B 64 664 129 HOH HOH . I 5 HOH B 65 665 131 HOH HOH . I 5 HOH B 66 666 137 HOH HOH . I 5 HOH B 67 667 138 HOH HOH . I 5 HOH B 68 668 139 HOH HOH . I 5 HOH B 69 669 142 HOH HOH . I 5 HOH B 70 670 143 HOH HOH . I 5 HOH B 71 671 144 HOH HOH . I 5 HOH B 72 672 148 HOH HOH . I 5 HOH B 73 673 149 HOH HOH . I 5 HOH B 74 674 151 HOH HOH . I 5 HOH B 75 675 152 HOH HOH . I 5 HOH B 76 676 156 HOH HOH . I 5 HOH B 77 677 157 HOH HOH . I 5 HOH B 78 678 160 HOH HOH . I 5 HOH B 79 679 163 HOH HOH . I 5 HOH B 80 680 169 HOH HOH . I 5 HOH B 81 681 170 HOH HOH . I 5 HOH B 82 682 173 HOH HOH . I 5 HOH B 83 683 176 HOH HOH . I 5 HOH B 84 684 179 HOH HOH . I 5 HOH B 85 685 181 HOH HOH . I 5 HOH B 86 686 182 HOH HOH . I 5 HOH B 87 687 186 HOH HOH . I 5 HOH B 88 688 190 HOH HOH . I 5 HOH B 89 689 191 HOH HOH . I 5 HOH B 90 690 192 HOH HOH . I 5 HOH B 91 691 194 HOH HOH . I 5 HOH B 92 692 196 HOH HOH . I 5 HOH B 93 693 198 HOH HOH . I 5 HOH B 94 694 200 HOH HOH . I 5 HOH B 95 695 202 HOH HOH . I 5 HOH B 96 696 203 HOH HOH . I 5 HOH B 97 697 207 HOH HOH . I 5 HOH B 98 698 208 HOH HOH . I 5 HOH B 99 699 209 HOH HOH . I 5 HOH B 100 700 217 HOH HOH . I 5 HOH B 101 701 218 HOH HOH . I 5 HOH B 102 702 219 HOH HOH . I 5 HOH B 103 703 220 HOH HOH . I 5 HOH B 104 704 223 HOH HOH . I 5 HOH B 105 705 224 HOH HOH . I 5 HOH B 106 706 225 HOH HOH . I 5 HOH B 107 707 228 HOH HOH . I 5 HOH B 108 708 229 HOH HOH . I 5 HOH B 109 709 230 HOH HOH . I 5 HOH B 110 710 231 HOH HOH . I 5 HOH B 111 711 233 HOH HOH . I 5 HOH B 112 712 235 HOH HOH . I 5 HOH B 113 713 239 HOH HOH . I 5 HOH B 114 714 240 HOH HOH . I 5 HOH B 115 715 241 HOH HOH . I 5 HOH B 116 716 245 HOH HOH . I 5 HOH B 117 717 247 HOH HOH . I 5 HOH B 118 718 250 HOH HOH . I 5 HOH B 119 719 251 HOH HOH . I 5 HOH B 120 720 252 HOH HOH . I 5 HOH B 121 721 255 HOH HOH . I 5 HOH B 122 722 257 HOH HOH . I 5 HOH B 123 723 259 HOH HOH . I 5 HOH B 124 724 261 HOH HOH . I 5 HOH B 125 725 263 HOH HOH . I 5 HOH B 126 726 264 HOH HOH . I 5 HOH B 127 727 265 HOH HOH . I 5 HOH B 128 728 267 HOH HOH . I 5 HOH B 129 729 269 HOH HOH . I 5 HOH B 130 730 273 HOH HOH . I 5 HOH B 131 731 277 HOH HOH . I 5 HOH B 132 732 281 HOH HOH . I 5 HOH B 133 733 282 HOH HOH . I 5 HOH B 134 734 283 HOH HOH . I 5 HOH B 135 735 286 HOH HOH . I 5 HOH B 136 736 287 HOH HOH . I 5 HOH B 137 737 288 HOH HOH . I 5 HOH B 138 738 289 HOH HOH . I 5 HOH B 139 739 291 HOH HOH . I 5 HOH B 140 740 293 HOH HOH . I 5 HOH B 141 741 294 HOH HOH . I 5 HOH B 142 742 296 HOH HOH . I 5 HOH B 143 743 297 HOH HOH . I 5 HOH B 144 744 300 HOH HOH . I 5 HOH B 145 745 302 HOH HOH . I 5 HOH B 146 746 306 HOH HOH . I 5 HOH B 147 747 307 HOH HOH . I 5 HOH B 148 748 308 HOH HOH . I 5 HOH B 149 749 310 HOH HOH . I 5 HOH B 150 750 312 HOH HOH . I 5 HOH B 151 751 313 HOH HOH . I 5 HOH B 152 752 314 HOH HOH . I 5 HOH B 153 753 315 HOH HOH . I 5 HOH B 154 754 318 HOH HOH . I 5 HOH B 155 755 322 HOH HOH . I 5 HOH B 156 756 323 HOH HOH . I 5 HOH B 157 757 326 HOH HOH . I 5 HOH B 158 758 328 HOH HOH . I 5 HOH B 159 759 335 HOH HOH . I 5 HOH B 160 760 338 HOH HOH . I 5 HOH B 161 761 340 HOH HOH . I 5 HOH B 162 762 341 HOH HOH . I 5 HOH B 163 763 344 HOH HOH . I 5 HOH B 164 764 348 HOH HOH . I 5 HOH B 165 765 350 HOH HOH . I 5 HOH B 166 766 351 HOH HOH . I 5 HOH B 167 767 354 HOH HOH . I 5 HOH B 168 768 356 HOH HOH . I 5 HOH B 169 769 357 HOH HOH . I 5 HOH B 170 770 358 HOH HOH . I 5 HOH B 171 771 359 HOH HOH . I 5 HOH B 172 772 365 HOH HOH . I 5 HOH B 173 773 366 HOH HOH . I 5 HOH B 174 774 367 HOH HOH . I 5 HOH B 175 775 368 HOH HOH . I 5 HOH B 176 776 369 HOH HOH . I 5 HOH B 177 777 373 HOH HOH . I 5 HOH B 178 778 374 HOH HOH . I 5 HOH B 179 779 375 HOH HOH . I 5 HOH B 180 780 379 HOH HOH . I 5 HOH B 181 781 380 HOH HOH . I 5 HOH B 182 782 382 HOH HOH . I 5 HOH B 183 783 383 HOH HOH . I 5 HOH B 184 784 385 HOH HOH . I 5 HOH B 185 785 386 HOH HOH . I 5 HOH B 186 786 388 HOH HOH . I 5 HOH B 187 787 390 HOH HOH . I 5 HOH B 188 788 391 HOH HOH . I 5 HOH B 189 789 394 HOH HOH . I 5 HOH B 190 790 395 HOH HOH . I 5 HOH B 191 791 396 HOH HOH . I 5 HOH B 192 792 397 HOH HOH . I 5 HOH B 193 793 398 HOH HOH . I 5 HOH B 194 794 399 HOH HOH . I 5 HOH B 195 795 400 HOH HOH . I 5 HOH B 196 796 406 HOH HOH . I 5 HOH B 197 797 410 HOH HOH . I 5 HOH B 198 798 411 HOH HOH . I 5 HOH B 199 799 414 HOH HOH . I 5 HOH B 200 800 415 HOH HOH . I 5 HOH B 201 801 418 HOH HOH . I 5 HOH B 202 802 421 HOH HOH . I 5 HOH B 203 803 422 HOH HOH . I 5 HOH B 204 804 423 HOH HOH . I 5 HOH B 205 805 426 HOH HOH . I 5 HOH B 206 806 428 HOH HOH . I 5 HOH B 207 807 432 HOH HOH . I 5 HOH B 208 808 440 HOH HOH . I 5 HOH B 209 809 442 HOH HOH . I 5 HOH B 210 810 445 HOH HOH . I 5 HOH B 211 811 446 HOH HOH . I 5 HOH B 212 812 447 HOH HOH . I 5 HOH B 213 813 448 HOH HOH . I 5 HOH B 214 814 450 HOH HOH . I 5 HOH B 215 815 451 HOH HOH . I 5 HOH B 216 816 452 HOH HOH . I 5 HOH B 217 817 453 HOH HOH . I 5 HOH B 218 818 457 HOH HOH . I 5 HOH B 219 819 459 HOH HOH . I 5 HOH B 220 820 460 HOH HOH . I 5 HOH B 221 821 462 HOH HOH . I 5 HOH B 222 822 466 HOH HOH . I 5 HOH B 223 823 470 HOH HOH . I 5 HOH B 224 824 472 HOH HOH . I 5 HOH B 225 825 473 HOH HOH . I 5 HOH B 226 826 474 HOH HOH . I 5 HOH B 227 827 476 HOH HOH . I 5 HOH B 228 828 480 HOH HOH . I 5 HOH B 229 829 482 HOH HOH . I 5 HOH B 230 830 484 HOH HOH . I 5 HOH B 231 831 486 HOH HOH . I 5 HOH B 232 832 487 HOH HOH . I 5 HOH B 233 833 490 HOH HOH . I 5 HOH B 234 834 493 HOH HOH . I 5 HOH B 235 835 495 HOH HOH . I 5 HOH B 236 836 496 HOH HOH . I 5 HOH B 237 837 498 HOH HOH . I 5 HOH B 238 838 502 HOH HOH . I 5 HOH B 239 839 503 HOH HOH . I 5 HOH B 240 840 505 HOH HOH . I 5 HOH B 241 841 506 HOH HOH . I 5 HOH B 242 842 510 HOH HOH . I 5 HOH B 243 843 512 HOH HOH . I 5 HOH B 244 844 513 HOH HOH . I 5 HOH B 245 845 516 HOH HOH . I 5 HOH B 246 846 517 HOH HOH . I 5 HOH B 247 847 518 HOH HOH . I 5 HOH B 248 848 519 HOH HOH . I 5 HOH B 249 849 520 HOH HOH . I 5 HOH B 250 850 521 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . A . D 3 -5.202 5.601 -37.26 0.05 12.2 ? N1 UDP 1401 A 1 HETATM 2 C C2 UDP . A . D 3 -4.967 6.236 -38.462 0.05 12.18 ? C2 UDP 1401 A 1 HETATM 3 N N3 UDP . A . D 3 -4.47 7.525 -38.466 0.05 12.09 ? N3 UDP 1401 A 1 HETATM 4 C C4 UDP . A . D 3 -4.213 8.191 -37.286 0.05 12.03 ? C4 UDP 1401 A 1 HETATM 5 C C5 UDP . A . D 3 -4.457 7.542 -36.09 0.05 12.07 ? C5 UDP 1401 A 1 HETATM 6 C C6 UDP . A . D 3 -5.098 6.307 -36.098 0.05 12.14 ? C6 UDP 1401 A 1 HETATM 7 O O2 UDP . A . D 3 -5.193 5.652 -39.52 0.05 12.24 ? O2 UDP 1401 A 1 HETATM 8 O O4 UDP . A . D 3 -3.77 9.351 -37.28 0.05 11.96 ? O4 UDP 1401 A 1 HETATM 9 C C1' UDP . A . D 3 -5.737 4.23 -37.23 0.05 12.3 ? C1' UDP 1401 A 1 HETATM 10 C C2' UDP . A . D 3 -4.638 3.213 -37 0.05 12.03 ? C2' UDP 1401 A 1 HETATM 11 O O2' UDP . A . D 3 -4.113 2.739 -38.221 0.05 11.91 ? O2' UDP 1401 A 1 HETATM 12 C C3' UDP . A . D 3 -5.347 2.131 -36.209 0.05 12.19 ? C3' UDP 1401 A 1 HETATM 13 C C4' UDP . A . D 3 -6.433 2.881 -35.455 0.05 12.47 ? C4' UDP 1401 A 1 HETATM 14 O O4' UDP . A . D 3 -6.605 4.112 -36.123 0.05 12.51 ? O4' UDP 1401 A 1 HETATM 15 O O3' UDP . A . D 3 -5.953 1.213 -37.091 0.05 12.3 ? O3' UDP 1401 A 1 HETATM 16 C C5' UDP . A . D 3 -6.04 3.131 -34.006 0.05 12.45 ? C5' UDP 1401 A 1 HETATM 17 O O5' UDP . A . D 3 -6.207 1.95 -33.256 0.05 12.5 ? O5' UDP 1401 A 1 HETATM 18 P PA UDP . A . D 3 -5.167 1.55 -32.101 0.05 12.33 ? PA UDP 1401 A 1 HETATM 19 O O1A UDP . A . D 3 -5.647 0.316 -31.42 0.05 12.47 ? O1A UDP 1401 A 1 HETATM 20 O O2A UDP . A . D 3 -3.807 1.429 -32.673 0.05 12 ? O2A UDP 1401 A 1 HETATM 21 O O3A UDP . A . D 3 -5.11 2.764 -31.051 0.05 12.4 ? O3A UDP 1401 A 1 HETATM 22 P PB UDP . A . D 3 -6.348 3.356 -30.218 0.05 12.77 ? PB UDP 1401 A 1 HETATM 23 O O1B UDP . A . D 3 -6.701 4.646 -30.851 0.05 12.85 ? O1B UDP 1401 A 1 HETATM 24 O O2B UDP . A . D 3 -5.864 3.547 -28.838 0.05 12.75 ? O2B UDP 1401 A 1 HETATM 25 O O3B UDP . A . D 3 -7.507 2.442 -30.252 0.05 13.05 ? O3B UDP 1401 A 1 # _model_server_stats.io_time_ms 231 _model_server_stats.parse_time_ms 109 _model_server_stats.create_model_time_ms 352 _model_server_stats.query_time_ms 5010 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 25 #