data_4M8Y
#
_model_server_result.job_id            C2DWke5texcZFiELyS7rOQ 
_model_server_result.datetime_utc      '2024-10-10 07:18:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4m8y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    4M8Y 
#
_exptl.entry_id    4M8Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              728.787 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIETHYL ({4-[(2S,3R)-2-({[(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YLOXY]CARBONYL}AMINO)-3-HYDROXY-4-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4M8Y 
_cell.length_a            61.905 
_cell.length_b            61.905 
_cell.length_c            83.178 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4M8Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C33 H49 N2 O12 P S' 
_chem_comp.formula_weight    728.787 
_chem_comp.id                KGQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIETHYL ({4-[(2S,3R)-2-({[(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YLOXY]CARBONYL}AMINO)-3-HYDROXY-4-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C6 KGQ sing 173 n n 
N C4 KGQ sing 174 n n 
N HN KGQ sing 175 n n 
C C1 KGQ sing 176 n n 
C C5 KGQ sing 177 n n 
C C32 KGQ sing 178 n n 
C H KGQ sing 179 n n 
O C15 KGQ sing 180 n n 
O C14 KGQ sing 181 n n 
C6 C8 KGQ sing 182 n n 
C6 C7 KGQ sing 183 n n 
C6 H6 KGQ sing 184 n n 
C8 C9 KGQ sing 185 n n 
C8 H81 KGQ sing 186 n n 
C8 H82 KGQ sing 187 n n 
C9 C11 KGQ doub 188 n y 
C9 C10 KGQ sing 189 n y 
C11 C13 KGQ sing 190 n y 
C11 H11 KGQ sing 191 n n 
C13 C14 KGQ doub 192 n y 
C13 H13 KGQ sing 193 n n 
C14 C12 KGQ sing 194 n y 
C15 P KGQ sing 195 n n 
C15 H151 KGQ sing 196 n n 
C15 H152 KGQ sing 197 n n 
P O1 KGQ sing 198 n n 
P O3 KGQ sing 199 n n 
P O2 KGQ doub 200 n n 
O3 C18 KGQ sing 201 n n 
C18 C19 KGQ sing 202 n n 
C18 H181 KGQ sing 203 n n 
C18 H182 KGQ sing 204 n n 
C19 H191 KGQ sing 205 n n 
C19 H192 KGQ sing 206 n n 
C19 H193 KGQ sing 207 n n 
O1 C16 KGQ sing 208 n n 
C16 C17 KGQ sing 209 n n 
C16 H161 KGQ sing 210 n n 
C16 H162 KGQ sing 211 n n 
C17 H171 KGQ sing 212 n n 
C17 H172 KGQ sing 213 n n 
C17 H173 KGQ sing 214 n n 
C12 C10 KGQ doub 215 n y 
C12 H12 KGQ sing 216 n n 
C10 H10 KGQ sing 217 n n 
C7 C20 KGQ sing 218 n n 
C7 O8 KGQ sing 219 n n 
C7 H7 KGQ sing 220 n n 
O8 HO8 KGQ sing 221 n n 
C20 N1 KGQ sing 222 n n 
C20 H201 KGQ sing 223 n n 
C20 H202 KGQ sing 224 n n 
N1 S KGQ sing 225 n n 
N1 C21 KGQ sing 226 n n 
C21 C22 KGQ sing 227 n n 
C21 H211 KGQ sing 228 n n 
C21 H212 KGQ sing 229 n n 
C22 C29 KGQ sing 230 n n 
C22 C30 KGQ sing 231 n n 
C22 H22 KGQ sing 232 n n 
C30 H301 KGQ sing 233 n n 
C30 H302 KGQ sing 234 n n 
C30 H303 KGQ sing 235 n n 
C29 H291 KGQ sing 236 n n 
C29 H292 KGQ sing 237 n n 
C29 H293 KGQ sing 238 n n 
S O9 KGQ doub 239 n n 
S C23 KGQ sing 240 n n 
S O10 KGQ doub 241 n n 
C23 C24 KGQ doub 242 n y 
C23 C28 KGQ sing 243 n y 
C28 C27 KGQ doub 244 n y 
C28 H28 KGQ sing 245 n n 
C27 C26 KGQ sing 246 n y 
C27 H27 KGQ sing 247 n n 
C26 O5 KGQ sing 248 n n 
C26 C25 KGQ doub 249 n y 
O5 C31 KGQ sing 250 n n 
C31 H311 KGQ sing 251 n n 
C31 H312 KGQ sing 252 n n 
C31 H313 KGQ sing 253 n n 
C25 C24 KGQ sing 254 n y 
C25 H25 KGQ sing 255 n n 
C24 H24 KGQ sing 256 n n 
C4 O7 KGQ doub 257 n n 
C4 O6 KGQ sing 258 n n 
O6 C5 KGQ sing 259 n n 
C5 C3 KGQ sing 260 n n 
C5 H5 KGQ sing 261 n n 
C3 O4 KGQ sing 262 n n 
C3 H31 KGQ sing 263 n n 
C3 H32A KGQ sing 264 n n 
O4 C32 KGQ sing 265 n n 
C32 O11 KGQ sing 266 n n 
C32 H32 KGQ sing 267 n n 
O11 C2 KGQ sing 268 n n 
C2 C1 KGQ sing 269 n n 
C2 H21 KGQ sing 270 n n 
C2 H22A KGQ sing 271 n n 
C1 H11A KGQ sing 272 n n 
C1 H12A KGQ sing 273 n n 
#
_atom_sites.entry_id                     4M8Y 
_atom_sites.fract_transf_matrix[1][1]    0.016154 
_atom_sites.fract_transf_matrix[1][2]    0.009326 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018653 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012022 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 KGQ A 1 201 1 KGQ KGQ . 
D 2 KGQ A 1 202 1 KGQ KGQ . 
E 3 HOH A 1 301 1 HOH HOH . 
E 3 HOH A 2 302 4 HOH HOH . 
E 3 HOH A 3 303 5 HOH HOH . 
E 3 HOH A 4 304 8 HOH HOH . 
E 3 HOH A 5 305 10 HOH HOH . 
E 3 HOH A 6 306 11 HOH HOH . 
E 3 HOH A 7 307 12 HOH HOH . 
E 3 HOH A 8 308 14 HOH HOH . 
E 3 HOH A 9 309 15 HOH HOH . 
E 3 HOH A 10 310 16 HOH HOH . 
E 3 HOH A 11 311 18 HOH HOH . 
E 3 HOH A 12 312 22 HOH HOH . 
E 3 HOH A 13 313 23 HOH HOH . 
E 3 HOH A 14 314 27 HOH HOH . 
E 3 HOH A 15 315 30 HOH HOH . 
E 3 HOH A 16 316 31 HOH HOH . 
E 3 HOH A 17 317 32 HOH HOH . 
E 3 HOH A 18 318 35 HOH HOH . 
E 3 HOH A 19 319 40 HOH HOH . 
E 3 HOH A 20 320 41 HOH HOH . 
E 3 HOH A 21 321 42 HOH HOH . 
E 3 HOH A 22 322 43 HOH HOH . 
E 3 HOH A 23 323 44 HOH HOH . 
E 3 HOH A 24 324 45 HOH HOH . 
E 3 HOH A 25 325 46 HOH HOH . 
E 3 HOH A 26 326 47 HOH HOH . 
E 3 HOH A 27 327 48 HOH HOH . 
E 3 HOH A 28 328 51 HOH HOH . 
E 3 HOH A 29 329 52 HOH HOH . 
E 3 HOH A 30 330 54 HOH HOH . 
E 3 HOH A 31 331 55 HOH HOH . 
E 3 HOH A 32 332 57 HOH HOH . 
E 3 HOH A 33 333 59 HOH HOH . 
E 3 HOH A 34 334 60 HOH HOH . 
E 3 HOH A 35 335 61 HOH HOH . 
E 3 HOH A 36 336 63 HOH HOH . 
E 3 HOH A 37 337 64 HOH HOH . 
E 3 HOH A 38 338 65 HOH HOH . 
E 3 HOH A 39 339 68 HOH HOH . 
E 3 HOH A 40 340 69 HOH HOH . 
E 3 HOH A 41 341 70 HOH HOH . 
E 3 HOH A 42 342 73 HOH HOH . 
E 3 HOH A 43 343 74 HOH HOH . 
E 3 HOH A 44 344 76 HOH HOH . 
E 3 HOH A 45 345 78 HOH HOH . 
E 3 HOH A 46 346 80 HOH HOH . 
F 3 HOH B 1 201 2 HOH HOH . 
F 3 HOH B 2 202 3 HOH HOH . 
F 3 HOH B 3 203 6 HOH HOH . 
F 3 HOH B 4 204 7 HOH HOH . 
F 3 HOH B 5 205 13 HOH HOH . 
F 3 HOH B 6 206 17 HOH HOH . 
F 3 HOH B 7 207 19 HOH HOH . 
F 3 HOH B 8 208 20 HOH HOH . 
F 3 HOH B 9 209 21 HOH HOH . 
F 3 HOH B 10 210 24 HOH HOH . 
F 3 HOH B 11 211 25 HOH HOH . 
F 3 HOH B 12 212 26 HOH HOH . 
F 3 HOH B 13 213 28 HOH HOH . 
F 3 HOH B 14 214 29 HOH HOH . 
F 3 HOH B 15 215 33 HOH HOH . 
F 3 HOH B 16 216 34 HOH HOH . 
F 3 HOH B 17 217 36 HOH HOH . 
F 3 HOH B 18 218 37 HOH HOH . 
F 3 HOH B 19 219 38 HOH HOH . 
F 3 HOH B 20 220 39 HOH HOH . 
F 3 HOH B 21 221 49 HOH HOH . 
F 3 HOH B 22 222 50 HOH HOH . 
F 3 HOH B 23 223 53 HOH HOH . 
F 3 HOH B 24 224 56 HOH HOH . 
F 3 HOH B 25 225 58 HOH HOH . 
F 3 HOH B 26 226 62 HOH HOH . 
F 3 HOH B 27 227 66 HOH HOH . 
F 3 HOH B 28 228 67 HOH HOH . 
F 3 HOH B 29 229 71 HOH HOH . 
F 3 HOH B 30 230 72 HOH HOH . 
F 3 HOH B 31 231 75 HOH HOH . 
F 3 HOH B 32 232 77 HOH HOH . 
F 3 HOH B 33 233 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N KGQ . B . D 2 -11.767 54.652 5.93 0.5 28.75 ? N KGQ 202 A 1 
HETATM 2 C C KGQ . B . D 2 -13.616 55.897 9.645 0.5 28.71 ? C KGQ 202 A 1 
HETATM 3 O O KGQ . B . D 2 -14.549 60.076 6.356 0.5 31.92 ? O KGQ 202 A 1 
HETATM 4 C C6 KGQ . B . D 2 -11.946 54.489 4.492 0.5 29.28 ? C6 KGQ 202 A 1 
HETATM 5 C C8 KGQ . B . D 2 -11.694 55.845 3.82 0.5 29.31 ? C8 KGQ 202 A 1 
HETATM 6 C C9 KGQ . B . D 2 -12.469 56.98 4.505 0.5 28.92 ? C9 KGQ 202 A 1 
HETATM 7 C C11 KGQ . B . D 2 -13.853 57.004 4.465 0.5 29 ? C11 KGQ 202 A 1 
HETATM 8 C C13 KGQ . B . D 2 -14.541 58.041 5.091 0.5 30.59 ? C13 KGQ 202 A 1 
HETATM 9 C C14 KGQ . B . D 2 -13.861 59.068 5.742 0.5 31.13 ? C14 KGQ 202 A 1 
HETATM 10 C C15 KGQ . B . D 2 -15.505 59.51 7.271 0.5 34.9 ? C15 KGQ 202 A 1 
HETATM 11 P P KGQ . B . D 2 -16.506 60.748 8.193 0.5 36.22 ? P KGQ 202 A 1 
HETATM 12 O O3 KGQ . B . D 2 -18.09 60.409 8.039 0.5 34.79 ? O3 KGQ 202 A 1 
HETATM 13 C C18 KGQ . B . D 2 -18.962 61.039 7.104 0.5 34.99 ? C18 KGQ 202 A 1 
HETATM 14 C C19 KGQ . B . D 2 -19.942 60.016 6.507 0.5 34.06 ? C19 KGQ 202 A 1 
HETATM 15 O O2 KGQ . B . D 2 -16.156 60.545 9.772 0.5 38.02 ? O2 KGQ 202 A 1 
HETATM 16 O O1 KGQ . B . D 2 -16.033 62.233 7.822 0.5 37.25 ? O1 KGQ 202 A 1 
HETATM 17 C C16 KGQ . B . D 2 -14.805 62.716 8.397 0.5 36.13 ? C16 KGQ 202 A 1 
HETATM 18 C C17 KGQ . B . D 2 -14.628 64.212 8.142 0.5 35.99 ? C17 KGQ 202 A 1 
HETATM 19 C C12 KGQ . B . D 2 -12.471 59.042 5.77 0.5 29.43 ? C12 KGQ 202 A 1 
HETATM 20 C C10 KGQ . B . D 2 -11.787 58.004 5.156 0.5 29.31 ? C10 KGQ 202 A 1 
HETATM 21 C C7 KGQ . B . D 2 -10.975 53.4 4.035 0.5 29.23 ? C7 KGQ 202 A 1 
HETATM 22 O O8 KGQ . B . D 2 -9.646 53.864 4.26 0.5 30.2 ? O8 KGQ 202 A 1 
HETATM 23 C C20 KGQ . B . D 2 -11.129 53.014 2.561 0.5 30.07 ? C20 KGQ 202 A 1 
HETATM 24 N N1 KGQ . B . D 2 -12.287 52.13 2.335 0.5 30.58 ? N1 KGQ 202 A 1 
HETATM 25 C C21 KGQ . B . D 2 -12.83 51.667 3.624 0.5 32.11 ? C21 KGQ 202 A 1 
HETATM 26 C C22 KGQ . B . D 2 -12.782 50.143 3.744 0.5 31.52 ? C22 KGQ 202 A 1 
HETATM 27 C C30 KGQ . B . D 2 -13.939 49.483 3.006 0.5 33.16 ? C30 KGQ 202 A 1 
HETATM 28 C C29 KGQ . B . D 2 -11.461 49.589 3.232 0.5 32.75 ? C29 KGQ 202 A 1 
HETATM 29 S S KGQ . B . D 2 -13.4 52.967 1.462 0.5 30.31 ? S KGQ 202 A 1 
HETATM 30 O O10 KGQ . B . D 2 -13.258 54.435 1.744 0.5 29.9 ? O10 KGQ 202 A 1 
HETATM 31 O O9 KGQ . B . D 2 -14.793 52.529 1.806 0.5 29.36 ? O9 KGQ 202 A 1 
HETATM 32 C C23 KGQ . B . D 2 -13.114 52.658 -0.239 0.5 30.5 ? C23 KGQ 202 A 1 
HETATM 33 C C28 KGQ . B . D 2 -13.693 51.536 -0.821 0.5 30.62 ? C28 KGQ 202 A 1 
HETATM 34 C C27 KGQ . B . D 2 -13.478 51.255 -2.161 0.5 30.97 ? C27 KGQ 202 A 1 
HETATM 35 C C26 KGQ . B . D 2 -12.679 52.1 -2.919 0.5 30.91 ? C26 KGQ 202 A 1 
HETATM 36 O O5 KGQ . B . D 2 -12.483 51.812 -4.228 0.5 31.49 ? O5 KGQ 202 A 1 
HETATM 37 C C31 KGQ . B . D 2 -13.372 50.754 -4.592 0.5 32.74 ? C31 KGQ 202 A 1 
HETATM 38 C C25 KGQ . B . D 2 -12.093 53.226 -2.343 0.5 30.13 ? C25 KGQ 202 A 1 
HETATM 39 C C24 KGQ . B . D 2 -12.315 53.506 -0.999 0.5 30.32 ? C24 KGQ 202 A 1 
HETATM 40 C C4 KGQ . B . D 2 -12.695 54.316 6.815 0.5 27.93 ? C4 KGQ 202 A 1 
HETATM 41 O O7 KGQ . B . D 2 -13.788 53.859 6.495 0.5 28.52 ? O7 KGQ 202 A 1 
HETATM 42 O O6 KGQ . B . D 2 -12.369 54.489 8.124 0.5 28.35 ? O6 KGQ 202 A 1 
HETATM 43 C C5 KGQ . B . D 2 -13.425 54.481 9.1 0.5 28.11 ? C5 KGQ 202 A 1 
HETATM 44 C C3 KGQ . B . D 2 -12.829 53.79 10.293 0.5 28.25 ? C3 KGQ 202 A 1 
HETATM 45 O O4 KGQ . B . D 2 -11.876 54.738 10.819 0.5 27.86 ? O4 KGQ 202 A 1 
HETATM 46 C C32 KGQ . B . D 2 -12.521 56.038 10.723 0.5 28.74 ? C32 KGQ 202 A 1 
HETATM 47 O O11 KGQ . B . D 2 -11.55 56.972 10.182 0.5 29.49 ? O11 KGQ 202 A 1 
HETATM 48 C C2 KGQ . B . D 2 -12.29 57.869 9.322 0.5 29.35 ? C2 KGQ 202 A 1 
HETATM 49 C C1 KGQ . B . D 2 -13.258 56.953 8.597 0.5 28.98 ? C1 KGQ 202 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           49 
#