data_4MBH # _model_server_result.job_id Ngnd-JGwoPu4R31pKaDGqQ _model_server_result.datetime_utc '2024-11-14 21:57:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mbh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 4MBH # _exptl.entry_id 4MBH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MBH _cell.length_a 49.538 _cell.length_b 55.259 _cell.length_c 83.819 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MBH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 52 A CYS 77 1_555 A SG CYS 98 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? covale ? covale1 A OG SER 45 A SER 70 1_555 D C 0RJ . A 0RJ 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.389 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 99 n n N1 C6 EPE sing 100 n n N1 C9 EPE sing 101 n n C2 C3 EPE sing 102 n n C2 H21 EPE sing 103 n n C2 H22 EPE sing 104 n n C3 N4 EPE sing 105 n n C3 H31 EPE sing 106 n n C3 H32 EPE sing 107 n n N4 C5 EPE sing 108 n n N4 C7 EPE sing 109 n n C5 C6 EPE sing 110 n n C5 H51 EPE sing 111 n n C5 H52 EPE sing 112 n n C6 H61 EPE sing 113 n n C6 H62 EPE sing 114 n n C7 C8 EPE sing 115 n n C7 H71 EPE sing 116 n n C7 H72 EPE sing 117 n n C8 O8 EPE sing 118 n n C8 H81 EPE sing 119 n n C8 H82 EPE sing 120 n n O8 HO8 EPE sing 121 n n C9 C10 EPE sing 122 n n C9 H91 EPE sing 123 n n C9 H92 EPE sing 124 n n C10 S EPE sing 125 n n C10 H101 EPE sing 126 n n C10 H102 EPE sing 127 n n S O1S EPE doub 128 n n S O2S EPE doub 129 n n S O3S EPE sing 130 n n O3S HOS3 EPE sing 131 n n # _atom_sites.entry_id 4MBH _atom_sites.fract_transf_matrix[1][1] 0.020187 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018097 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01193 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MA4 A 1 301 400 MA4 MA4 . C 2 MA4 A 1 302 400 MA4 MA4 . D 3 0RJ A 1 303 1 0RJ DRG . E 4 EPE A 1 304 1 EPE EPE . F 5 HOH A 1 401 2 HOH HOH . F 5 HOH A 2 402 3 HOH HOH . F 5 HOH A 3 403 4 HOH HOH . F 5 HOH A 4 404 5 HOH HOH . F 5 HOH A 5 405 6 HOH HOH . F 5 HOH A 6 406 7 HOH HOH . F 5 HOH A 7 407 8 HOH HOH . F 5 HOH A 8 408 9 HOH HOH . F 5 HOH A 9 409 10 HOH HOH . F 5 HOH A 10 410 11 HOH HOH . F 5 HOH A 11 411 12 HOH HOH . F 5 HOH A 12 412 13 HOH HOH . F 5 HOH A 13 413 14 HOH HOH . F 5 HOH A 14 414 15 HOH HOH . F 5 HOH A 15 415 16 HOH HOH . F 5 HOH A 16 416 17 HOH HOH . F 5 HOH A 17 417 18 HOH HOH . F 5 HOH A 18 418 19 HOH HOH . F 5 HOH A 19 419 20 HOH HOH . F 5 HOH A 20 420 21 HOH HOH . F 5 HOH A 21 421 22 HOH HOH . F 5 HOH A 22 422 23 HOH HOH . F 5 HOH A 23 423 24 HOH HOH . F 5 HOH A 24 424 25 HOH HOH . F 5 HOH A 25 425 26 HOH HOH . F 5 HOH A 26 426 27 HOH HOH . F 5 HOH A 27 427 28 HOH HOH . F 5 HOH A 28 428 29 HOH HOH . F 5 HOH A 29 429 30 HOH HOH . F 5 HOH A 30 430 31 HOH HOH . F 5 HOH A 31 431 32 HOH HOH . F 5 HOH A 32 432 33 HOH HOH . F 5 HOH A 33 433 34 HOH HOH . F 5 HOH A 34 434 35 HOH HOH . F 5 HOH A 35 435 36 HOH HOH . F 5 HOH A 36 436 37 HOH HOH . F 5 HOH A 37 437 38 HOH HOH . F 5 HOH A 38 438 39 HOH HOH . F 5 HOH A 39 439 40 HOH HOH . F 5 HOH A 40 440 41 HOH HOH . F 5 HOH A 41 441 42 HOH HOH . F 5 HOH A 42 442 43 HOH HOH . F 5 HOH A 43 443 44 HOH HOH . F 5 HOH A 44 444 45 HOH HOH . F 5 HOH A 45 445 46 HOH HOH . F 5 HOH A 46 446 47 HOH HOH . F 5 HOH A 47 447 48 HOH HOH . F 5 HOH A 48 448 49 HOH HOH . F 5 HOH A 49 449 50 HOH HOH . F 5 HOH A 50 450 51 HOH HOH . F 5 HOH A 51 451 52 HOH HOH . F 5 HOH A 52 452 53 HOH HOH . F 5 HOH A 53 453 54 HOH HOH . F 5 HOH A 54 454 55 HOH HOH . F 5 HOH A 55 455 56 HOH HOH . F 5 HOH A 56 456 57 HOH HOH . F 5 HOH A 57 457 58 HOH HOH . F 5 HOH A 58 458 59 HOH HOH . F 5 HOH A 59 459 60 HOH HOH . F 5 HOH A 60 460 61 HOH HOH . F 5 HOH A 61 461 62 HOH HOH . F 5 HOH A 62 462 63 HOH HOH . F 5 HOH A 63 463 64 HOH HOH . F 5 HOH A 64 464 65 HOH HOH . F 5 HOH A 65 465 66 HOH HOH . F 5 HOH A 66 466 67 HOH HOH . F 5 HOH A 67 467 68 HOH HOH . F 5 HOH A 68 468 69 HOH HOH . F 5 HOH A 69 469 70 HOH HOH . F 5 HOH A 70 470 72 HOH HOH . F 5 HOH A 71 471 73 HOH HOH . F 5 HOH A 72 472 74 HOH HOH . F 5 HOH A 73 473 75 HOH HOH . F 5 HOH A 74 474 76 HOH HOH . F 5 HOH A 75 475 77 HOH HOH . F 5 HOH A 76 476 78 HOH HOH . F 5 HOH A 77 477 79 HOH HOH . F 5 HOH A 78 478 80 HOH HOH . F 5 HOH A 79 479 81 HOH HOH . F 5 HOH A 80 480 82 HOH HOH . F 5 HOH A 81 481 83 HOH HOH . F 5 HOH A 82 482 84 HOH HOH . F 5 HOH A 83 483 85 HOH HOH . F 5 HOH A 84 484 86 HOH HOH . F 5 HOH A 85 485 87 HOH HOH . F 5 HOH A 86 486 88 HOH HOH . F 5 HOH A 87 487 89 HOH HOH . F 5 HOH A 88 488 90 HOH HOH . F 5 HOH A 89 489 91 HOH HOH . F 5 HOH A 90 490 92 HOH HOH . F 5 HOH A 91 491 93 HOH HOH . F 5 HOH A 92 492 94 HOH HOH . F 5 HOH A 93 493 95 HOH HOH . F 5 HOH A 94 494 96 HOH HOH . F 5 HOH A 95 495 97 HOH HOH . F 5 HOH A 96 496 98 HOH HOH . F 5 HOH A 97 497 99 HOH HOH . F 5 HOH A 98 498 100 HOH HOH . F 5 HOH A 99 499 101 HOH HOH . F 5 HOH A 100 500 102 HOH HOH . F 5 HOH A 101 501 103 HOH HOH . F 5 HOH A 102 502 104 HOH HOH . F 5 HOH A 103 503 105 HOH HOH . F 5 HOH A 104 504 106 HOH HOH . F 5 HOH A 105 505 107 HOH HOH . F 5 HOH A 106 506 108 HOH HOH . F 5 HOH A 107 507 109 HOH HOH . F 5 HOH A 108 508 110 HOH HOH . F 5 HOH A 109 509 111 HOH HOH . F 5 HOH A 110 510 112 HOH HOH . F 5 HOH A 111 511 113 HOH HOH . F 5 HOH A 112 512 114 HOH HOH . F 5 HOH A 113 513 115 HOH HOH . F 5 HOH A 114 514 116 HOH HOH . F 5 HOH A 115 515 117 HOH HOH . F 5 HOH A 116 516 118 HOH HOH . F 5 HOH A 117 517 120 HOH HOH . F 5 HOH A 118 518 121 HOH HOH . F 5 HOH A 119 519 122 HOH HOH . F 5 HOH A 120 520 123 HOH HOH . F 5 HOH A 121 521 124 HOH HOH . F 5 HOH A 122 522 125 HOH HOH . F 5 HOH A 123 523 126 HOH HOH . F 5 HOH A 124 524 127 HOH HOH . F 5 HOH A 125 525 128 HOH HOH . F 5 HOH A 126 526 129 HOH HOH . F 5 HOH A 127 527 130 HOH HOH . F 5 HOH A 128 528 131 HOH HOH . F 5 HOH A 129 529 132 HOH HOH . F 5 HOH A 130 530 133 HOH HOH . F 5 HOH A 131 531 134 HOH HOH . F 5 HOH A 132 532 135 HOH HOH . F 5 HOH A 133 533 136 HOH HOH . F 5 HOH A 134 534 137 HOH HOH . F 5 HOH A 135 535 138 HOH HOH . F 5 HOH A 136 536 139 HOH HOH . F 5 HOH A 137 537 140 HOH HOH . F 5 HOH A 138 538 141 HOH HOH . F 5 HOH A 139 539 142 HOH HOH . F 5 HOH A 140 540 143 HOH HOH . F 5 HOH A 141 541 144 HOH HOH . F 5 HOH A 142 542 145 HOH HOH . F 5 HOH A 143 543 146 HOH HOH . F 5 HOH A 144 544 147 HOH HOH . F 5 HOH A 145 545 148 HOH HOH . F 5 HOH A 146 546 149 HOH HOH . F 5 HOH A 147 547 150 HOH HOH . F 5 HOH A 148 548 151 HOH HOH . F 5 HOH A 149 549 152 HOH HOH . F 5 HOH A 150 550 153 HOH HOH . F 5 HOH A 151 551 154 HOH HOH . F 5 HOH A 152 552 155 HOH HOH . F 5 HOH A 153 553 156 HOH HOH . F 5 HOH A 154 554 157 HOH HOH . F 5 HOH A 155 555 158 HOH HOH . F 5 HOH A 156 556 159 HOH HOH . F 5 HOH A 157 557 160 HOH HOH . F 5 HOH A 158 558 161 HOH HOH . F 5 HOH A 159 559 162 HOH HOH . F 5 HOH A 160 560 163 HOH HOH . F 5 HOH A 161 561 164 HOH HOH . F 5 HOH A 162 562 165 HOH HOH . F 5 HOH A 163 563 166 HOH HOH . F 5 HOH A 164 564 167 HOH HOH . F 5 HOH A 165 565 168 HOH HOH . F 5 HOH A 166 566 169 HOH HOH . F 5 HOH A 167 567 170 HOH HOH . F 5 HOH A 168 568 171 HOH HOH . F 5 HOH A 169 569 172 HOH HOH . F 5 HOH A 170 570 173 HOH HOH . F 5 HOH A 171 571 174 HOH HOH . F 5 HOH A 172 572 175 HOH HOH . F 5 HOH A 173 573 176 HOH HOH . F 5 HOH A 174 574 177 HOH HOH . F 5 HOH A 175 575 178 HOH HOH . F 5 HOH A 176 576 179 HOH HOH . F 5 HOH A 177 577 180 HOH HOH . F 5 HOH A 178 578 181 HOH HOH . F 5 HOH A 179 579 182 HOH HOH . F 5 HOH A 180 580 183 HOH HOH . F 5 HOH A 181 581 184 HOH HOH . F 5 HOH A 182 582 185 HOH HOH . F 5 HOH A 183 583 186 HOH HOH . F 5 HOH A 184 584 187 HOH HOH . F 5 HOH A 185 585 188 HOH HOH . F 5 HOH A 186 586 189 HOH HOH . F 5 HOH A 187 587 190 HOH HOH . F 5 HOH A 188 588 191 HOH HOH . F 5 HOH A 189 589 192 HOH HOH . F 5 HOH A 190 590 194 HOH HOH . F 5 HOH A 191 591 195 HOH HOH . F 5 HOH A 192 592 196 HOH HOH . F 5 HOH A 193 593 197 HOH HOH . F 5 HOH A 194 594 198 HOH HOH . F 5 HOH A 195 595 200 HOH HOH . F 5 HOH A 196 596 201 HOH HOH . F 5 HOH A 197 597 202 HOH HOH . F 5 HOH A 198 598 203 HOH HOH . F 5 HOH A 199 599 205 HOH HOH . F 5 HOH A 200 600 206 HOH HOH . F 5 HOH A 201 601 207 HOH HOH . F 5 HOH A 202 602 208 HOH HOH . F 5 HOH A 203 603 209 HOH HOH . F 5 HOH A 204 604 210 HOH HOH . F 5 HOH A 205 605 211 HOH HOH . F 5 HOH A 206 606 212 HOH HOH . F 5 HOH A 207 607 213 HOH HOH . F 5 HOH A 208 608 214 HOH HOH . F 5 HOH A 209 609 215 HOH HOH . F 5 HOH A 210 610 216 HOH HOH . F 5 HOH A 211 611 218 HOH HOH . F 5 HOH A 212 612 219 HOH HOH . F 5 HOH A 213 613 220 HOH HOH . F 5 HOH A 214 614 222 HOH HOH . F 5 HOH A 215 615 223 HOH HOH . F 5 HOH A 216 616 225 HOH HOH . F 5 HOH A 217 617 226 HOH HOH . F 5 HOH A 218 618 227 HOH HOH . F 5 HOH A 219 619 228 HOH HOH . F 5 HOH A 220 620 229 HOH HOH . F 5 HOH A 221 621 230 HOH HOH . F 5 HOH A 222 622 231 HOH HOH . F 5 HOH A 223 623 232 HOH HOH . F 5 HOH A 224 624 233 HOH HOH . F 5 HOH A 225 625 234 HOH HOH . F 5 HOH A 226 626 235 HOH HOH . F 5 HOH A 227 627 237 HOH HOH . F 5 HOH A 228 628 238 HOH HOH . F 5 HOH A 229 629 239 HOH HOH . F 5 HOH A 230 630 240 HOH HOH . F 5 HOH A 231 631 241 HOH HOH . F 5 HOH A 232 632 242 HOH HOH . F 5 HOH A 233 633 243 HOH HOH . F 5 HOH A 234 634 244 HOH HOH . F 5 HOH A 235 635 245 HOH HOH . F 5 HOH A 236 636 247 HOH HOH . F 5 HOH A 237 637 248 HOH HOH . F 5 HOH A 238 638 249 HOH HOH . F 5 HOH A 239 639 250 HOH HOH . F 5 HOH A 240 640 251 HOH HOH . F 5 HOH A 241 641 252 HOH HOH . F 5 HOH A 242 642 253 HOH HOH . F 5 HOH A 243 643 254 HOH HOH . F 5 HOH A 244 644 256 HOH HOH . F 5 HOH A 245 645 257 HOH HOH . F 5 HOH A 246 646 258 HOH HOH . F 5 HOH A 247 647 259 HOH HOH . F 5 HOH A 248 648 260 HOH HOH . F 5 HOH A 249 649 261 HOH HOH . F 5 HOH A 250 650 262 HOH HOH . F 5 HOH A 251 651 263 HOH HOH . F 5 HOH A 252 652 264 HOH HOH . F 5 HOH A 253 653 266 HOH HOH . F 5 HOH A 254 654 267 HOH HOH . F 5 HOH A 255 655 268 HOH HOH . F 5 HOH A 256 656 270 HOH HOH . F 5 HOH A 257 657 271 HOH HOH . F 5 HOH A 258 658 272 HOH HOH . F 5 HOH A 259 659 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . E 4 10.272 35.285 0.137 0.8 20.65 ? N1 EPE 304 A 1 HETATM 2 C C9 EPE . . . E 4 10.224 34.076 0.96 0.8 17 ? C9 EPE 304 A 1 HETATM 3 C C10 EPE . . . E 4 11.364 34.137 1.96 0.8 15.37 ? C10 EPE 304 A 1 HETATM 4 S S EPE . . . E 4 11.307 32.827 3.162 0.8 12.18 ? S EPE 304 A 1 HETATM 5 O O1S EPE . . . E 4 11.361 31.559 2.435 0.8 14.14 ? O1S EPE 304 A 1 HETATM 6 O O2S EPE . . . E 4 10.061 32.795 3.895 0.8 12.99 ? O2S EPE 304 A 1 HETATM 7 O O3S EPE . . . E 4 12.498 33.034 3.96 0.8 11.06 ? O3S EPE 304 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #