data_4MBL # _model_server_result.job_id c-kyyisZcMslfwFp7EZdWg _model_server_result.datetime_utc '2024-11-14 06:43:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4MBL # _exptl.entry_id 4MBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.452 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1R,2R)-N-[3-(naphthalen-2-yl)pyrazolo[1,5-a]pyrimidin-5-yl]cyclohexane-1,2-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4MBL _cell.length_a 98.56 _cell.length_b 98.56 _cell.length_c 80.859 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N5' _chem_comp.formula_weight 357.452 _chem_comp.id 26L _chem_comp.mon_nstd_flag . _chem_comp.name (1R,2R)-N-[3-(naphthalen-2-yl)pyrazolo[1,5-a]pyrimidin-5-yl]cyclohexane-1,2-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C19 26L doub 1 n y C18 C17 26L sing 2 n y C19 C10 26L sing 3 n y C20 N4 26L doub 4 n y C20 C9 26L sing 5 n y N4 N5 26L sing 6 n y C17 C16 26L doub 7 n y C17 C12 26L sing 8 n y C16 C15 26L sing 9 n y C10 C9 26L sing 10 n n C10 C11 26L doub 11 n y C9 C8 26L doub 12 n y N5 C8 26L sing 13 n y N5 C21 26L sing 14 n y C15 C14 26L doub 15 n y C12 C11 26L sing 16 n y C12 C13 26L doub 17 n y C8 N3 26L sing 18 n y C21 C22 26L doub 19 n y C14 C13 26L sing 20 n y N3 C7 26L doub 21 n y C22 C7 26L sing 22 n y C7 N2 26L sing 23 n n N2 C6 26L sing 24 n n C6 C5 26L sing 25 n n C6 C1 26L sing 26 n n N1 C1 26L sing 27 n n C5 C4 26L sing 28 n n C4 C3 26L sing 29 n n C1 C2 26L sing 30 n n C2 C3 26L sing 31 n n N1 H1 26L sing 32 n n N1 H2 26L sing 33 n n C1 H4 26L sing 34 n n C6 H5 26L sing 35 n n C5 H6 26L sing 36 n n C5 H7 26L sing 37 n n C4 H8 26L sing 38 n n C4 H9 26L sing 39 n n C3 H10 26L sing 40 n n C3 H11 26L sing 41 n n C2 H12 26L sing 42 n n C2 H13 26L sing 43 n n N2 H14 26L sing 44 n n C22 H15 26L sing 45 n n C21 H16 26L sing 46 n n C20 H17 26L sing 47 n n C19 H18 26L sing 48 n n C18 H19 26L sing 49 n n C11 H20 26L sing 50 n n C16 H21 26L sing 51 n n C15 H22 26L sing 52 n n C14 H23 26L sing 53 n n C13 H24 26L sing 54 n n # _atom_sites.entry_id 4MBL _atom_sites.fract_transf_matrix[1][1] 0.010146 _atom_sites.fract_transf_matrix[1][2] 0.005858 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 26L _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 26L _pdbx_nonpoly_scheme.auth_mon_id SCH _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 26L . . . B 2 39.757 5.391 4.856 1 46.97 ? N1 26L 401 A 1 HETATM 2 C C1 26L . . . B 2 40.372 4.127 5.287 1 44.16 ? C1 26L 401 A 1 HETATM 3 C C6 26L . . . B 2 39.993 2.958 4.378 1 39.54 ? C6 26L 401 A 1 HETATM 4 C C5 26L . . . B 2 40.525 1.645 4.947 1 39.53 ? C5 26L 401 A 1 HETATM 5 C C4 26L . . . B 2 42.052 1.697 5.056 1 42.87 ? C4 26L 401 A 1 HETATM 6 C C3 26L . . . B 2 42.542 2.936 5.848 1 43.79 ? C3 26L 401 A 1 HETATM 7 C C2 26L . . . B 2 41.888 4.247 5.373 1 42.77 ? C2 26L 401 A 1 HETATM 8 N N2 26L . . . B 2 38.605 2.947 3.974 1 33.27 ? N2 26L 401 A 1 HETATM 9 C C7 26L . . . B 2 38.35 3.096 2.632 1 28.84 ? C7 26L 401 A 1 HETATM 10 C C22 26L . . . B 2 37.069 3.411 2.205 1 28.27 ? C22 26L 401 A 1 HETATM 11 C C21 26L . . . B 2 36.792 3.467 0.867 1 27.78 ? C21 26L 401 A 1 HETATM 12 N N5 26L . . . B 2 37.863 3.287 0.007 1 24.68 ? N5 26L 401 A 1 HETATM 13 C C8 26L . . . B 2 39.127 3.03 0.51 1 24.96 ? C8 26L 401 A 1 HETATM 14 N N3 26L . . . B 2 39.369 2.917 1.811 1 27.87 ? N3 26L 401 A 1 HETATM 15 N N4 26L . . . B 2 37.841 3.402 -1.34 1 22.55 ? N4 26L 401 A 1 HETATM 16 C C20 26L . . . B 2 39.127 3.109 -1.728 1 25.09 ? C20 26L 401 A 1 HETATM 17 C C9 26L . . . B 2 39.988 2.929 -0.629 1 25.06 ? C9 26L 401 A 1 HETATM 18 C C10 26L . . . B 2 41.448 2.618 -0.665 1 24.35 ? C10 26L 401 A 1 HETATM 19 C C19 26L . . . B 2 42.134 2.581 -1.883 1 22.9 ? C19 26L 401 A 1 HETATM 20 C C18 26L . . . B 2 43.462 2.262 -1.936 1 23.15 ? C18 26L 401 A 1 HETATM 21 C C17 26L . . . B 2 44.196 1.989 -0.752 1 25.96 ? C17 26L 401 A 1 HETATM 22 C C12 26L . . . B 2 43.513 2.034 0.492 1 24.94 ? C12 26L 401 A 1 HETATM 23 C C11 26L . . . B 2 42.132 2.359 0.504 1 24.39 ? C11 26L 401 A 1 HETATM 24 C C16 26L . . . B 2 45.599 1.754 -0.748 1 28.07 ? C16 26L 401 A 1 HETATM 25 C C15 26L . . . B 2 46.262 1.501 0.423 1 25.86 ? C15 26L 401 A 1 HETATM 26 C C14 26L . . . B 2 45.591 1.521 1.632 1 24.72 ? C14 26L 401 A 1 HETATM 27 C C13 26L . . . B 2 44.241 1.758 1.678 1 25.18 ? C13 26L 401 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #