data_4MBS
#
_model_server_result.job_id            '_hBPOHJmQRZZL-9rXmHmDw' 
_model_server_result.datetime_utc      '2024-11-22 04:12:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mbs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1106}' 
#
_entry.id    4MBS 
#
_exptl.entry_id    4MBS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MBS 
_cell.length_a            72.92 
_cell.length_b            103.52 
_cell.length_c            137.47 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MBS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,Q 1 1 
B,K,L,M,N,O,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 A CYS 20 1_555 A SG CYS 322 A CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 103 A CYS 101 1_555 A SG CYS 180 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf3 B SG CYS 22 B CYS 20 1_555 B SG CYS 322 B CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf4 B SG CYS 103 B CYS 101 1_555 B SG CYS 180 B CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc1 A SG CYS 231 A CYS 1006 1_555 D ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc2 A SG CYS 234 A CYS 1009 1_555 D ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc3 A SG CYS 264 A CYS 1039 1_555 D ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc4 A SG CYS 267 A CYS 1042 1_555 D ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc5 B SG CYS 231 B CYS 1006 1_555 L ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc6 B SG CYS 234 B CYS 1009 1_555 L ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc7 B SG CYS 264 B CYS 1039 1_555 L ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc8 B SG CYS 267 B CYS 1042 1_555 L ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 319 n n 
C10 C9 OLC doub 320 n n 
C10 C11 OLC sing 321 n n 
C9 C8 OLC sing 322 n n 
C17 C16 OLC sing 323 z n 
C11 C12 OLC sing 324 n n 
C8 C7 OLC sing 325 n n 
C24 C22 OLC sing 326 n n 
C24 O25 OLC sing 327 n n 
C16 C15 OLC sing 328 n n 
C12 C13 OLC sing 329 n n 
C7 C6 OLC sing 330 n n 
C15 C14 OLC sing 331 n n 
C13 C14 OLC sing 332 n n 
C6 C5 OLC sing 333 n n 
C5 C4 OLC sing 334 n n 
C4 C3 OLC sing 335 n n 
C3 C2 OLC sing 336 n n 
C2 C1 OLC sing 337 n n 
C21 C22 OLC sing 338 n n 
C21 O20 OLC sing 339 n n 
C1 O19 OLC doub 340 n n 
C1 O20 OLC sing 341 n n 
C22 O23 OLC sing 342 n n 
C18 H18 OLC sing 343 n n 
C18 H18A OLC sing 344 n n 
C18 H18B OLC sing 345 n n 
C10 H10 OLC sing 346 n n 
C9 H9 OLC sing 347 n n 
C17 H17 OLC sing 348 n n 
C17 H17A OLC sing 349 n n 
C11 H11 OLC sing 350 n n 
C11 H11A OLC sing 351 n n 
C8 H8 OLC sing 352 n n 
C8 H8A OLC sing 353 n n 
C24 H24 OLC sing 354 n n 
C24 H24A OLC sing 355 n n 
C16 H16 OLC sing 356 n n 
C16 H16A OLC sing 357 n n 
C12 H12 OLC sing 358 n n 
C12 H12A OLC sing 359 n n 
C7 H7 OLC sing 360 n n 
C7 H7A OLC sing 361 n n 
C15 H15 OLC sing 362 n n 
C15 H15A OLC sing 363 n n 
C13 H13 OLC sing 364 n n 
C13 H13A OLC sing 365 n n 
C6 H6 OLC sing 366 n n 
C6 H6A OLC sing 367 n n 
C14 H14 OLC sing 368 n n 
C14 H14A OLC sing 369 n n 
C5 H5 OLC sing 370 n n 
C5 H5A OLC sing 371 n n 
C4 H4 OLC sing 372 n n 
C4 H4A OLC sing 373 n n 
C3 H3 OLC sing 374 n n 
C3 H3A OLC sing 375 n n 
C2 H2 OLC sing 376 n n 
C2 H2A OLC sing 377 n n 
C21 H21 OLC sing 378 n n 
C21 H21A OLC sing 379 n n 
C22 H22 OLC sing 380 n n 
O25 HO25 OLC sing 381 n n 
O23 HO23 OLC sing 382 n n 
#
_atom_sites.entry_id                     4MBS 
_atom_sites.fract_transf_matrix[1][1]    0.013714 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00966 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007274 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MRV A 1 1101 2000 MRV MRV . 
D 3 ZN A 1 1102 2001 ZN ZN . 
E 4 OLC A 1 1103 2005 OLC OLC . 
F 4 OLC A 1 1104 2007 OLC OLC . 
G 4 OLC A 1 1105 2401 OLC OLC . 
H 4 OLC A 1 1106 2402 OLC OLC . 
I 4 OLC A 1 1107 2006 OLC OLC . 
J 4 OLC A 1 1108 2408 OLC OLC . 
K 2 MRV B 1 1101 2000 MRV MRV . 
L 3 ZN B 1 1102 2001 ZN ZN . 
M 4 OLC B 1 1103 2004 OLC OLC . 
N 4 OLC B 1 1104 2402 OLC OLC . 
O 4 OLC B 1 1105 2403 OLC OLC . 
P 4 OLC B 1 1106 2409 OLC OLC . 
Q 5 HOH A 1 1201 2510 HOH HOH . 
Q 5 HOH A 2 1202 2512 HOH HOH . 
Q 5 HOH A 3 1203 2513 HOH HOH . 
Q 5 HOH A 4 1204 2516 HOH HOH . 
Q 5 HOH A 5 1205 2517 HOH HOH . 
Q 5 HOH A 6 1206 2518 HOH HOH . 
Q 5 HOH A 7 1207 2521 HOH HOH . 
Q 5 HOH A 8 1208 2523 HOH HOH . 
Q 5 HOH A 9 1209 2524 HOH HOH . 
Q 5 HOH A 10 1210 2529 HOH HOH . 
Q 5 HOH A 11 1211 2530 HOH HOH . 
Q 5 HOH A 12 1212 2539 HOH HOH . 
Q 5 HOH A 13 1213 2540 HOH HOH . 
Q 5 HOH A 14 1214 2541 HOH HOH . 
Q 5 HOH A 15 1215 2542 HOH HOH . 
Q 5 HOH A 16 1216 2543 HOH HOH . 
Q 5 HOH A 17 1217 2544 HOH HOH . 
Q 5 HOH A 18 1218 2545 HOH HOH . 
Q 5 HOH A 19 1219 2546 HOH HOH . 
Q 5 HOH A 20 1220 2547 HOH HOH . 
Q 5 HOH A 21 1221 2548 HOH HOH . 
Q 5 HOH A 22 1222 2549 HOH HOH . 
R 5 HOH B 1 1201 2511 HOH HOH . 
R 5 HOH B 2 1202 2514 HOH HOH . 
R 5 HOH B 3 1203 2519 HOH HOH . 
R 5 HOH B 4 1204 2520 HOH HOH . 
R 5 HOH B 5 1205 2525 HOH HOH . 
R 5 HOH B 6 1206 2526 HOH HOH . 
R 5 HOH B 7 1207 2527 HOH HOH . 
R 5 HOH B 8 1208 2528 HOH HOH . 
R 5 HOH B 9 1209 2530 HOH HOH . 
R 5 HOH B 10 1210 2531 HOH HOH . 
R 5 HOH B 11 1211 2532 HOH HOH . 
R 5 HOH B 12 1212 2533 HOH HOH . 
R 5 HOH B 13 1213 2534 HOH HOH . 
R 5 HOH B 14 1214 2535 HOH HOH . 
R 5 HOH B 15 1215 2536 HOH HOH . 
R 5 HOH B 16 1216 2537 HOH HOH . 
R 5 HOH B 17 1217 2540 HOH HOH . 
R 5 HOH B 18 1218 2541 HOH HOH . 
R 5 HOH B 19 1219 2542 HOH HOH . 
R 5 HOH B 20 1220 2543 HOH HOH . 
R 5 HOH B 21 1221 2544 HOH HOH . 
R 5 HOH B 22 1222 2545 HOH HOH . 
R 5 HOH B 23 1223 2546 HOH HOH . 
R 5 HOH B 24 1224 2547 HOH HOH . 
R 5 HOH B 25 1225 2548 HOH HOH . 
R 5 HOH B 26 1226 2549 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . H 4 142.767 99.453 44.603 1 80.91 ? C18 OLC 1106 A 1 
HETATM 2 C C10 OLC . . . H 4 142.576 98.031 35.34 1 97 ? C10 OLC 1106 A 1 
HETATM 3 C C9 OLC . . . H 4 142.416 97.358 34.192 1 99.59 ? C9 OLC 1106 A 1 
HETATM 4 C C17 OLC . . . H 4 142.194 99.397 43.2 1 81.36 ? C17 OLC 1106 A 1 
HETATM 5 C C11 OLC . . . H 4 141.514 98.842 36.056 1 93.89 ? C11 OLC 1106 A 1 
HETATM 6 C C8 OLC . . . H 4 141.129 97.286 33.397 1 101.35 ? C8 OLC 1106 A 1 
HETATM 7 C C24 OLC . . . H 4 138.879 90.847 23.218 1 118.67 ? C24 OLC 1106 A 1 
HETATM 8 C C16 OLC . . . H 4 143.185 98.82 42.188 1 80.53 ? C16 OLC 1106 A 1 
HETATM 9 C C12 OLC . . . H 4 141.41 98.357 37.501 1 91.56 ? C12 OLC 1106 A 1 
HETATM 10 C C7 OLC . . . H 4 141.464 97.23 31.911 1 103.07 ? C7 OLC 1106 A 1 
HETATM 11 C C15 OLC . . . H 4 143.055 99.488 40.824 1 80.98 ? C15 OLC 1106 A 1 
HETATM 12 C C13 OLC . . . H 4 142.139 99.269 38.488 1 88.29 ? C13 OLC 1106 A 1 
HETATM 13 C C6 OLC . . . H 4 140.195 97.347 31.076 1 104.9 ? C6 OLC 1106 A 1 
HETATM 14 C C14 OLC . . . H 4 142.354 98.573 39.83 1 84.23 ? C14 OLC 1106 A 1 
HETATM 15 C C5 OLC . . . H 4 140.433 96.846 29.658 1 107.47 ? C5 OLC 1106 A 1 
HETATM 16 C C4 OLC . . . H 4 139.677 95.544 29.41 1 109.81 ? C4 OLC 1106 A 1 
HETATM 17 C C3 OLC . . . H 4 140.35 94.712 28.323 1 111.71 ? C3 OLC 1106 A 1 
HETATM 18 C C2 OLC . . . H 4 139.417 94.517 27.129 1 113.29 ? C2 OLC 1106 A 1 
HETATM 19 C C21 OLC . . . H 4 139.396 93.214 23.806 1 116.39 ? C21 OLC 1106 A 1 
HETATM 20 C C1 OLC . . . H 4 140.193 94.462 25.831 1 113.88 ? C1 OLC 1106 A 1 
HETATM 21 C C22 OLC . . . H 4 139.808 92.026 22.938 1 117.67 ? C22 OLC 1106 A 1 
HETATM 22 O O19 OLC . . . H 4 140.841 95.428 25.454 1 113.88 ? O19 OLC 1106 A 1 
HETATM 23 O O25 OLC . . . H 4 139.216 89.737 22.376 1 118.89 ? O25 OLC 1106 A 1 
HETATM 24 O O23 OLC . . . H 4 139.732 92.385 21.552 1 117.2 ? O23 OLC 1106 A 1 
HETATM 25 O O20 OLC . . . H 4 140.164 93.255 25.012 1 114.74 ? O20 OLC 1106 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           404 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           25 
#