data_4MDO
#
_model_server_result.job_id            BPdwQr6tv1QfUE2kCdQzkw 
_model_server_result.datetime_utc      '2024-11-05 00:57:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mdo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    4MDO 
#
_exptl.entry_id    4MDO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4MDO 
_cell.length_a            113.543 
_cell.length_b            113.543 
_cell.length_c            179.058 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MDO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 354 n n 
C C2 TRS sing 355 n n 
C C3 TRS sing 356 n n 
C N TRS sing 357 n n 
C1 O1 TRS sing 358 n n 
C1 H11 TRS sing 359 n n 
C1 H12 TRS sing 360 n n 
C2 O2 TRS sing 361 n n 
C2 H21 TRS sing 362 n n 
C2 H22 TRS sing 363 n n 
C3 O3 TRS sing 364 n n 
C3 H31 TRS sing 365 n n 
C3 H32 TRS sing 366 n n 
N HN1 TRS sing 367 n n 
N HN2 TRS sing 368 n n 
N HN3 TRS sing 369 n n 
O1 HO1 TRS sing 370 n n 
O2 HO2 TRS sing 371 n n 
O3 HO3 TRS sing 372 n n 
#
_atom_sites.entry_id                     4MDO 
_atom_sites.fract_transf_matrix[1][1]    0.008807 
_atom_sites.fract_transf_matrix[1][2]    0.005085 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01017 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005585 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TRS A 1 501 1 TRS TRS . 
C 3 PEG A 1 502 2 PEG PEG . 
D 4 SO4 A 1 503 3 SO4 SO4 . 
E 5 HOH A 1 601 1 HOH HOH . 
E 5 HOH A 2 602 4 HOH HOH . 
E 5 HOH A 3 603 5 HOH HOH . 
E 5 HOH A 4 604 7 HOH HOH . 
E 5 HOH A 5 605 10 HOH HOH . 
E 5 HOH A 6 606 11 HOH HOH . 
E 5 HOH A 7 607 12 HOH HOH . 
E 5 HOH A 8 608 13 HOH HOH . 
E 5 HOH A 9 609 14 HOH HOH . 
E 5 HOH A 10 610 16 HOH HOH . 
E 5 HOH A 11 611 17 HOH HOH . 
E 5 HOH A 12 612 18 HOH HOH . 
E 5 HOH A 13 613 19 HOH HOH . 
E 5 HOH A 14 614 21 HOH HOH . 
E 5 HOH A 15 615 23 HOH HOH . 
E 5 HOH A 16 616 25 HOH HOH . 
E 5 HOH A 17 617 26 HOH HOH . 
E 5 HOH A 18 618 27 HOH HOH . 
E 5 HOH A 19 619 28 HOH HOH . 
E 5 HOH A 20 620 29 HOH HOH . 
E 5 HOH A 21 621 30 HOH HOH . 
E 5 HOH A 22 622 32 HOH HOH . 
E 5 HOH A 23 623 34 HOH HOH . 
E 5 HOH A 24 624 35 HOH HOH . 
E 5 HOH A 25 625 36 HOH HOH . 
E 5 HOH A 26 626 37 HOH HOH . 
E 5 HOH A 27 627 39 HOH HOH . 
E 5 HOH A 28 628 40 HOH HOH . 
E 5 HOH A 29 629 41 HOH HOH . 
E 5 HOH A 30 630 42 HOH HOH . 
E 5 HOH A 31 631 44 HOH HOH . 
E 5 HOH A 32 632 45 HOH HOH . 
E 5 HOH A 33 633 47 HOH HOH . 
E 5 HOH A 34 634 49 HOH HOH . 
E 5 HOH A 35 635 50 HOH HOH . 
E 5 HOH A 36 636 51 HOH HOH . 
E 5 HOH A 37 637 52 HOH HOH . 
E 5 HOH A 38 638 53 HOH HOH . 
E 5 HOH A 39 639 54 HOH HOH . 
E 5 HOH A 40 640 55 HOH HOH . 
E 5 HOH A 41 641 57 HOH HOH . 
E 5 HOH A 42 642 58 HOH HOH . 
E 5 HOH A 43 643 59 HOH HOH . 
E 5 HOH A 44 644 60 HOH HOH . 
E 5 HOH A 45 645 62 HOH HOH . 
E 5 HOH A 46 646 63 HOH HOH . 
E 5 HOH A 47 647 64 HOH HOH . 
E 5 HOH A 48 648 65 HOH HOH . 
E 5 HOH A 49 649 66 HOH HOH . 
E 5 HOH A 50 650 67 HOH HOH . 
E 5 HOH A 51 651 68 HOH HOH . 
E 5 HOH A 52 652 69 HOH HOH . 
E 5 HOH A 53 653 70 HOH HOH . 
E 5 HOH A 54 654 71 HOH HOH . 
E 5 HOH A 55 655 72 HOH HOH . 
E 5 HOH A 56 656 73 HOH HOH . 
E 5 HOH A 57 657 74 HOH HOH . 
E 5 HOH A 58 658 75 HOH HOH . 
E 5 HOH A 59 659 76 HOH HOH . 
E 5 HOH A 60 660 77 HOH HOH . 
E 5 HOH A 61 661 78 HOH HOH . 
E 5 HOH A 62 662 80 HOH HOH . 
E 5 HOH A 63 663 81 HOH HOH . 
E 5 HOH A 64 664 82 HOH HOH . 
E 5 HOH A 65 665 83 HOH HOH . 
E 5 HOH A 66 666 85 HOH HOH . 
E 5 HOH A 67 667 89 HOH HOH . 
E 5 HOH A 68 668 91 HOH HOH . 
E 5 HOH A 69 669 92 HOH HOH . 
E 5 HOH A 70 670 95 HOH HOH . 
E 5 HOH A 71 671 96 HOH HOH . 
E 5 HOH A 72 672 97 HOH HOH . 
E 5 HOH A 73 673 99 HOH HOH . 
E 5 HOH A 74 674 102 HOH HOH . 
E 5 HOH A 75 675 105 HOH HOH . 
E 5 HOH A 76 676 106 HOH HOH . 
E 5 HOH A 77 677 107 HOH HOH . 
E 5 HOH A 78 678 108 HOH HOH . 
E 5 HOH A 79 679 109 HOH HOH . 
E 5 HOH A 80 680 111 HOH HOH . 
E 5 HOH A 81 681 112 HOH HOH . 
E 5 HOH A 82 682 114 HOH HOH . 
E 5 HOH A 83 683 115 HOH HOH . 
E 5 HOH A 84 684 116 HOH HOH . 
E 5 HOH A 85 685 117 HOH HOH . 
E 5 HOH A 86 686 118 HOH HOH . 
E 5 HOH A 87 687 119 HOH HOH . 
E 5 HOH A 88 688 120 HOH HOH . 
E 5 HOH A 89 689 121 HOH HOH . 
E 5 HOH A 90 690 124 HOH HOH . 
E 5 HOH A 91 691 125 HOH HOH . 
E 5 HOH A 92 692 126 HOH HOH . 
E 5 HOH A 93 693 127 HOH HOH . 
E 5 HOH A 94 694 129 HOH HOH . 
E 5 HOH A 95 695 130 HOH HOH . 
E 5 HOH A 96 696 131 HOH HOH . 
E 5 HOH A 97 697 133 HOH HOH . 
E 5 HOH A 98 698 134 HOH HOH . 
E 5 HOH A 99 699 137 HOH HOH . 
E 5 HOH A 100 700 138 HOH HOH . 
E 5 HOH A 101 701 139 HOH HOH . 
E 5 HOH A 102 702 140 HOH HOH . 
E 5 HOH A 103 703 143 HOH HOH . 
E 5 HOH A 104 704 145 HOH HOH . 
E 5 HOH A 105 705 147 HOH HOH . 
E 5 HOH A 106 706 148 HOH HOH . 
E 5 HOH A 107 707 149 HOH HOH . 
E 5 HOH A 108 708 155 HOH HOH . 
E 5 HOH A 109 709 157 HOH HOH . 
E 5 HOH A 110 710 159 HOH HOH . 
E 5 HOH A 111 711 160 HOH HOH . 
E 5 HOH A 112 712 165 HOH HOH . 
E 5 HOH A 113 713 166 HOH HOH . 
E 5 HOH A 114 714 167 HOH HOH . 
E 5 HOH A 115 715 168 HOH HOH . 
E 5 HOH A 116 716 172 HOH HOH . 
E 5 HOH A 117 717 175 HOH HOH . 
E 5 HOH A 118 718 176 HOH HOH . 
E 5 HOH A 119 719 177 HOH HOH . 
E 5 HOH A 120 720 178 HOH HOH . 
E 5 HOH A 121 721 179 HOH HOH . 
E 5 HOH A 122 722 180 HOH HOH . 
E 5 HOH A 123 723 181 HOH HOH . 
E 5 HOH A 124 724 183 HOH HOH . 
E 5 HOH A 125 725 186 HOH HOH . 
E 5 HOH A 126 726 190 HOH HOH . 
E 5 HOH A 127 727 192 HOH HOH . 
E 5 HOH A 128 728 193 HOH HOH . 
E 5 HOH A 129 729 199 HOH HOH . 
E 5 HOH A 130 730 200 HOH HOH . 
E 5 HOH A 131 731 204 HOH HOH . 
E 5 HOH A 132 732 231 HOH HOH . 
E 5 HOH A 133 733 234 HOH HOH . 
E 5 HOH A 134 734 236 HOH HOH . 
E 5 HOH A 135 735 242 HOH HOH . 
E 5 HOH A 136 736 248 HOH HOH . 
E 5 HOH A 137 737 253 HOH HOH . 
E 5 HOH A 138 738 254 HOH HOH . 
E 5 HOH A 139 739 259 HOH HOH . 
E 5 HOH A 140 740 275 HOH HOH . 
E 5 HOH A 141 741 279 HOH HOH . 
E 5 HOH A 142 742 284 HOH HOH . 
E 5 HOH A 143 743 285 HOH HOH . 
E 5 HOH A 144 744 287 HOH HOH . 
E 5 HOH A 145 745 289 HOH HOH . 
E 5 HOH A 146 746 295 HOH HOH . 
E 5 HOH A 147 747 304 HOH HOH . 
E 5 HOH A 148 748 320 HOH HOH . 
E 5 HOH A 149 749 338 HOH HOH . 
E 5 HOH A 150 750 339 HOH HOH . 
E 5 HOH A 151 751 341 HOH HOH . 
E 5 HOH A 152 752 342 HOH HOH . 
E 5 HOH A 153 753 349 HOH HOH . 
E 5 HOH A 154 754 350 HOH HOH . 
E 5 HOH A 155 755 351 HOH HOH . 
E 5 HOH A 156 756 363 HOH HOH . 
E 5 HOH A 157 757 364 HOH HOH . 
E 5 HOH A 158 758 366 HOH HOH . 
E 5 HOH A 159 759 367 HOH HOH . 
E 5 HOH A 160 760 368 HOH HOH . 
E 5 HOH A 161 761 369 HOH HOH . 
E 5 HOH A 162 762 371 HOH HOH . 
E 5 HOH A 163 763 372 HOH HOH . 
E 5 HOH A 164 764 374 HOH HOH . 
E 5 HOH A 165 765 375 HOH HOH . 
E 5 HOH A 166 766 382 HOH HOH . 
E 5 HOH A 167 767 383 HOH HOH . 
E 5 HOH A 168 768 384 HOH HOH . 
E 5 HOH A 169 769 385 HOH HOH . 
E 5 HOH A 170 770 387 HOH HOH . 
E 5 HOH A 171 771 388 HOH HOH . 
E 5 HOH A 172 772 389 HOH HOH . 
E 5 HOH A 173 773 390 HOH HOH . 
E 5 HOH A 174 774 391 HOH HOH . 
E 5 HOH A 175 775 392 HOH HOH . 
E 5 HOH A 176 776 393 HOH HOH . 
E 5 HOH A 177 777 394 HOH HOH . 
E 5 HOH A 178 778 395 HOH HOH . 
E 5 HOH A 179 779 396 HOH HOH . 
E 5 HOH A 180 780 398 HOH HOH . 
E 5 HOH A 181 781 399 HOH HOH . 
E 5 HOH A 182 782 400 HOH HOH . 
E 5 HOH A 183 783 402 HOH HOH . 
E 5 HOH A 184 784 403 HOH HOH . 
E 5 HOH A 185 785 404 HOH HOH . 
E 5 HOH A 186 786 405 HOH HOH . 
E 5 HOH A 187 787 406 HOH HOH . 
E 5 HOH A 188 788 408 HOH HOH . 
E 5 HOH A 189 789 409 HOH HOH . 
E 5 HOH A 190 790 411 HOH HOH . 
E 5 HOH A 191 791 412 HOH HOH . 
E 5 HOH A 192 792 413 HOH HOH . 
E 5 HOH A 193 793 416 HOH HOH . 
E 5 HOH A 194 794 418 HOH HOH . 
E 5 HOH A 195 795 421 HOH HOH . 
E 5 HOH A 196 796 422 HOH HOH . 
E 5 HOH A 197 797 423 HOH HOH . 
E 5 HOH A 198 798 425 HOH HOH . 
E 5 HOH A 199 799 427 HOH HOH . 
E 5 HOH A 200 800 430 HOH HOH . 
E 5 HOH A 201 801 433 HOH HOH . 
E 5 HOH A 202 802 435 HOH HOH . 
E 5 HOH A 203 803 437 HOH HOH . 
E 5 HOH A 204 804 439 HOH HOH . 
E 5 HOH A 205 805 440 HOH HOH . 
E 5 HOH A 206 806 444 HOH HOH . 
E 5 HOH A 207 807 447 HOH HOH . 
E 5 HOH A 208 808 449 HOH HOH . 
E 5 HOH A 209 809 452 HOH HOH . 
E 5 HOH A 210 810 454 HOH HOH . 
E 5 HOH A 211 811 456 HOH HOH . 
E 5 HOH A 212 812 459 HOH HOH . 
E 5 HOH A 213 813 460 HOH HOH . 
E 5 HOH A 214 814 462 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . B 2 -2.467 -46.646 1.096 1 38.87 ? C TRS 501 A 1 
HETATM 2 C C1 TRS . . . B 2 -3.952 -47.051 1.224 1 41.28 ? C1 TRS 501 A 1 
HETATM 3 C C2 TRS . . . B 2 -2.068 -46.632 -0.378 1 40.62 ? C2 TRS 501 A 1 
HETATM 4 C C3 TRS . . . B 2 -1.618 -47.587 1.952 1 36.29 ? C3 TRS 501 A 1 
HETATM 5 N N TRS . . . B 2 -2.248 -45.224 1.521 1 39.66 ? N TRS 501 A 1 
HETATM 6 O O1 TRS . . . B 2 -4.276 -48.29 0.557 1 40.52 ? O1 TRS 501 A 1 
HETATM 7 O O2 TRS . . . B 2 -3.114 -46.011 -1.173 1 41.47 ? O2 TRS 501 A 1 
HETATM 8 O O3 TRS . . . B 2 -1.993 -47.509 3.349 1 36.5 ? O3 TRS 501 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           224 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#