data_4MDO # _model_server_result.job_id 3onJL6vp0lRvIpnTsRx5Jw _model_server_result.datetime_utc '2024-11-05 00:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mdo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4MDO # _exptl.entry_id 4MDO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4MDO _cell.length_a 113.543 _cell.length_b 113.543 _cell.length_c 179.058 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MDO _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 4MDO _atom_sites.fract_transf_matrix[1][1] 0.008807 _atom_sites.fract_transf_matrix[1][2] 0.005085 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005585 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 501 1 TRS TRS . C 3 PEG A 1 502 2 PEG PEG . D 4 SO4 A 1 503 3 SO4 SO4 . E 5 HOH A 1 601 1 HOH HOH . E 5 HOH A 2 602 4 HOH HOH . E 5 HOH A 3 603 5 HOH HOH . E 5 HOH A 4 604 7 HOH HOH . E 5 HOH A 5 605 10 HOH HOH . E 5 HOH A 6 606 11 HOH HOH . E 5 HOH A 7 607 12 HOH HOH . E 5 HOH A 8 608 13 HOH HOH . E 5 HOH A 9 609 14 HOH HOH . E 5 HOH A 10 610 16 HOH HOH . E 5 HOH A 11 611 17 HOH HOH . E 5 HOH A 12 612 18 HOH HOH . E 5 HOH A 13 613 19 HOH HOH . E 5 HOH A 14 614 21 HOH HOH . E 5 HOH A 15 615 23 HOH HOH . E 5 HOH A 16 616 25 HOH HOH . E 5 HOH A 17 617 26 HOH HOH . E 5 HOH A 18 618 27 HOH HOH . E 5 HOH A 19 619 28 HOH HOH . E 5 HOH A 20 620 29 HOH HOH . E 5 HOH A 21 621 30 HOH HOH . E 5 HOH A 22 622 32 HOH HOH . E 5 HOH A 23 623 34 HOH HOH . E 5 HOH A 24 624 35 HOH HOH . E 5 HOH A 25 625 36 HOH HOH . E 5 HOH A 26 626 37 HOH HOH . E 5 HOH A 27 627 39 HOH HOH . E 5 HOH A 28 628 40 HOH HOH . E 5 HOH A 29 629 41 HOH HOH . E 5 HOH A 30 630 42 HOH HOH . E 5 HOH A 31 631 44 HOH HOH . E 5 HOH A 32 632 45 HOH HOH . E 5 HOH A 33 633 47 HOH HOH . E 5 HOH A 34 634 49 HOH HOH . E 5 HOH A 35 635 50 HOH HOH . E 5 HOH A 36 636 51 HOH HOH . E 5 HOH A 37 637 52 HOH HOH . E 5 HOH A 38 638 53 HOH HOH . E 5 HOH A 39 639 54 HOH HOH . E 5 HOH A 40 640 55 HOH HOH . E 5 HOH A 41 641 57 HOH HOH . E 5 HOH A 42 642 58 HOH HOH . E 5 HOH A 43 643 59 HOH HOH . E 5 HOH A 44 644 60 HOH HOH . E 5 HOH A 45 645 62 HOH HOH . E 5 HOH A 46 646 63 HOH HOH . E 5 HOH A 47 647 64 HOH HOH . E 5 HOH A 48 648 65 HOH HOH . E 5 HOH A 49 649 66 HOH HOH . E 5 HOH A 50 650 67 HOH HOH . E 5 HOH A 51 651 68 HOH HOH . E 5 HOH A 52 652 69 HOH HOH . E 5 HOH A 53 653 70 HOH HOH . E 5 HOH A 54 654 71 HOH HOH . E 5 HOH A 55 655 72 HOH HOH . E 5 HOH A 56 656 73 HOH HOH . E 5 HOH A 57 657 74 HOH HOH . E 5 HOH A 58 658 75 HOH HOH . E 5 HOH A 59 659 76 HOH HOH . E 5 HOH A 60 660 77 HOH HOH . E 5 HOH A 61 661 78 HOH HOH . E 5 HOH A 62 662 80 HOH HOH . E 5 HOH A 63 663 81 HOH HOH . E 5 HOH A 64 664 82 HOH HOH . E 5 HOH A 65 665 83 HOH HOH . E 5 HOH A 66 666 85 HOH HOH . E 5 HOH A 67 667 89 HOH HOH . E 5 HOH A 68 668 91 HOH HOH . E 5 HOH A 69 669 92 HOH HOH . E 5 HOH A 70 670 95 HOH HOH . E 5 HOH A 71 671 96 HOH HOH . E 5 HOH A 72 672 97 HOH HOH . E 5 HOH A 73 673 99 HOH HOH . E 5 HOH A 74 674 102 HOH HOH . E 5 HOH A 75 675 105 HOH HOH . E 5 HOH A 76 676 106 HOH HOH . E 5 HOH A 77 677 107 HOH HOH . E 5 HOH A 78 678 108 HOH HOH . E 5 HOH A 79 679 109 HOH HOH . E 5 HOH A 80 680 111 HOH HOH . E 5 HOH A 81 681 112 HOH HOH . E 5 HOH A 82 682 114 HOH HOH . E 5 HOH A 83 683 115 HOH HOH . E 5 HOH A 84 684 116 HOH HOH . E 5 HOH A 85 685 117 HOH HOH . E 5 HOH A 86 686 118 HOH HOH . E 5 HOH A 87 687 119 HOH HOH . E 5 HOH A 88 688 120 HOH HOH . E 5 HOH A 89 689 121 HOH HOH . E 5 HOH A 90 690 124 HOH HOH . E 5 HOH A 91 691 125 HOH HOH . E 5 HOH A 92 692 126 HOH HOH . E 5 HOH A 93 693 127 HOH HOH . E 5 HOH A 94 694 129 HOH HOH . E 5 HOH A 95 695 130 HOH HOH . E 5 HOH A 96 696 131 HOH HOH . E 5 HOH A 97 697 133 HOH HOH . E 5 HOH A 98 698 134 HOH HOH . E 5 HOH A 99 699 137 HOH HOH . E 5 HOH A 100 700 138 HOH HOH . E 5 HOH A 101 701 139 HOH HOH . E 5 HOH A 102 702 140 HOH HOH . E 5 HOH A 103 703 143 HOH HOH . E 5 HOH A 104 704 145 HOH HOH . E 5 HOH A 105 705 147 HOH HOH . E 5 HOH A 106 706 148 HOH HOH . E 5 HOH A 107 707 149 HOH HOH . E 5 HOH A 108 708 155 HOH HOH . E 5 HOH A 109 709 157 HOH HOH . E 5 HOH A 110 710 159 HOH HOH . E 5 HOH A 111 711 160 HOH HOH . E 5 HOH A 112 712 165 HOH HOH . E 5 HOH A 113 713 166 HOH HOH . E 5 HOH A 114 714 167 HOH HOH . E 5 HOH A 115 715 168 HOH HOH . E 5 HOH A 116 716 172 HOH HOH . E 5 HOH A 117 717 175 HOH HOH . E 5 HOH A 118 718 176 HOH HOH . E 5 HOH A 119 719 177 HOH HOH . E 5 HOH A 120 720 178 HOH HOH . E 5 HOH A 121 721 179 HOH HOH . E 5 HOH A 122 722 180 HOH HOH . E 5 HOH A 123 723 181 HOH HOH . E 5 HOH A 124 724 183 HOH HOH . E 5 HOH A 125 725 186 HOH HOH . E 5 HOH A 126 726 190 HOH HOH . E 5 HOH A 127 727 192 HOH HOH . E 5 HOH A 128 728 193 HOH HOH . E 5 HOH A 129 729 199 HOH HOH . E 5 HOH A 130 730 200 HOH HOH . E 5 HOH A 131 731 204 HOH HOH . E 5 HOH A 132 732 231 HOH HOH . E 5 HOH A 133 733 234 HOH HOH . E 5 HOH A 134 734 236 HOH HOH . E 5 HOH A 135 735 242 HOH HOH . E 5 HOH A 136 736 248 HOH HOH . E 5 HOH A 137 737 253 HOH HOH . E 5 HOH A 138 738 254 HOH HOH . E 5 HOH A 139 739 259 HOH HOH . E 5 HOH A 140 740 275 HOH HOH . E 5 HOH A 141 741 279 HOH HOH . E 5 HOH A 142 742 284 HOH HOH . E 5 HOH A 143 743 285 HOH HOH . E 5 HOH A 144 744 287 HOH HOH . E 5 HOH A 145 745 289 HOH HOH . E 5 HOH A 146 746 295 HOH HOH . E 5 HOH A 147 747 304 HOH HOH . E 5 HOH A 148 748 320 HOH HOH . E 5 HOH A 149 749 338 HOH HOH . E 5 HOH A 150 750 339 HOH HOH . E 5 HOH A 151 751 341 HOH HOH . E 5 HOH A 152 752 342 HOH HOH . E 5 HOH A 153 753 349 HOH HOH . E 5 HOH A 154 754 350 HOH HOH . E 5 HOH A 155 755 351 HOH HOH . E 5 HOH A 156 756 363 HOH HOH . E 5 HOH A 157 757 364 HOH HOH . E 5 HOH A 158 758 366 HOH HOH . E 5 HOH A 159 759 367 HOH HOH . E 5 HOH A 160 760 368 HOH HOH . E 5 HOH A 161 761 369 HOH HOH . E 5 HOH A 162 762 371 HOH HOH . E 5 HOH A 163 763 372 HOH HOH . E 5 HOH A 164 764 374 HOH HOH . E 5 HOH A 165 765 375 HOH HOH . E 5 HOH A 166 766 382 HOH HOH . E 5 HOH A 167 767 383 HOH HOH . E 5 HOH A 168 768 384 HOH HOH . E 5 HOH A 169 769 385 HOH HOH . E 5 HOH A 170 770 387 HOH HOH . E 5 HOH A 171 771 388 HOH HOH . E 5 HOH A 172 772 389 HOH HOH . E 5 HOH A 173 773 390 HOH HOH . E 5 HOH A 174 774 391 HOH HOH . E 5 HOH A 175 775 392 HOH HOH . E 5 HOH A 176 776 393 HOH HOH . E 5 HOH A 177 777 394 HOH HOH . E 5 HOH A 178 778 395 HOH HOH . E 5 HOH A 179 779 396 HOH HOH . E 5 HOH A 180 780 398 HOH HOH . E 5 HOH A 181 781 399 HOH HOH . E 5 HOH A 182 782 400 HOH HOH . E 5 HOH A 183 783 402 HOH HOH . E 5 HOH A 184 784 403 HOH HOH . E 5 HOH A 185 785 404 HOH HOH . E 5 HOH A 186 786 405 HOH HOH . E 5 HOH A 187 787 406 HOH HOH . E 5 HOH A 188 788 408 HOH HOH . E 5 HOH A 189 789 409 HOH HOH . E 5 HOH A 190 790 411 HOH HOH . E 5 HOH A 191 791 412 HOH HOH . E 5 HOH A 192 792 413 HOH HOH . E 5 HOH A 193 793 416 HOH HOH . E 5 HOH A 194 794 418 HOH HOH . E 5 HOH A 195 795 421 HOH HOH . E 5 HOH A 196 796 422 HOH HOH . E 5 HOH A 197 797 423 HOH HOH . E 5 HOH A 198 798 425 HOH HOH . E 5 HOH A 199 799 427 HOH HOH . E 5 HOH A 200 800 430 HOH HOH . E 5 HOH A 201 801 433 HOH HOH . E 5 HOH A 202 802 435 HOH HOH . E 5 HOH A 203 803 437 HOH HOH . E 5 HOH A 204 804 439 HOH HOH . E 5 HOH A 205 805 440 HOH HOH . E 5 HOH A 206 806 444 HOH HOH . E 5 HOH A 207 807 447 HOH HOH . E 5 HOH A 208 808 449 HOH HOH . E 5 HOH A 209 809 452 HOH HOH . E 5 HOH A 210 810 454 HOH HOH . E 5 HOH A 211 811 456 HOH HOH . E 5 HOH A 212 812 459 HOH HOH . E 5 HOH A 213 813 460 HOH HOH . E 5 HOH A 214 814 462 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . C 3 -9.279 -50.578 -6.471 1 51.53 ? C1 PEG 502 A 1 HETATM 2 O O1 PEG . . . C 3 -10.683 -50.918 -6.4 1 42.2 ? O1 PEG 502 A 1 HETATM 3 C C2 PEG . . . C 3 -8.733 -50.394 -5.048 1 54.61 ? C2 PEG 502 A 1 HETATM 4 O O2 PEG . . . C 3 -7.384 -49.876 -4.923 1 52.24 ? O2 PEG 502 A 1 HETATM 5 C C3 PEG . . . C 3 -7.051 -49.874 -3.508 1 49.83 ? C3 PEG 502 A 1 HETATM 6 C C4 PEG . . . C 3 -6.066 -48.784 -3.087 1 47.53 ? C4 PEG 502 A 1 HETATM 7 O O4 PEG . . . C 3 -6.129 -48.56 -1.663 1 42.59 ? O4 PEG 502 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #