data_4MES # _model_server_result.job_id RyGB6Q4H7U46rtKheTKXMQ _model_server_result.datetime_utc '2024-11-05 05:30:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 4MES # _exptl.entry_id 4MES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 243.304 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.52 _cell.angle_gamma 90 _cell.entry_id 4MES _cell.length_a 61.53 _cell.length_b 84.2 _cell.length_c 127.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MES _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,XA 1 1 B,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,YA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 CA N N # _chem_comp.formula 'C14 H17 N3 O' _chem_comp.formula_weight 243.304 _chem_comp.id 26G _chem_comp.mon_nstd_flag . _chem_comp.name 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CM2 C2A 26G sing 38 n n C2A N3A 26G doub 39 n y C2A N1A 26G sing 40 n y N3A C4A 26G sing 41 n y N1A C6A 26G doub 42 n y C30 C2 26G doub 43 n y C30 C28 26G sing 44 n y C4A N4A 26G sing 45 n n C4A C5A 26G doub 46 n y C2 C01 26G sing 47 n y C6A C5A 26G sing 48 n y C5A C7A 26G sing 49 n n C28 C5 26G doub 50 n y C01 C7A 26G sing 51 n n C01 C4 26G doub 52 n y C5 C4 26G sing 53 n y C5 C6 26G sing 54 n n C6 C02 26G sing 55 n n C02 O31 26G sing 56 n n CM2 H1 26G sing 57 n n CM2 H2 26G sing 58 n n CM2 H3 26G sing 59 n n N4A H4 26G sing 60 n n N4A H5 26G sing 61 n n C02 H6 26G sing 62 n n C02 H7 26G sing 63 n n C6 H8 26G sing 64 n n C6 H9 26G sing 65 n n C2 H10 26G sing 66 n n C4 H11 26G sing 67 n n C7A H12 26G sing 68 n n C7A H13 26G sing 69 n n C6A H14 26G sing 70 n n C28 H15 26G sing 71 n n C30 H16 26G sing 72 n n O31 H17 26G sing 73 n n # _atom_sites.entry_id 4MES _atom_sites.fract_transf_matrix[1][1] 0.016252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001001 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BNG A 1 201 2 BNG BNG . D 2 BNG A 1 202 7 BNG BNG . E 3 26G A 1 203 1 26G LIG . F 4 PG4 A 1 204 5 PG4 PG4 . G 4 PG4 A 1 205 12 PG4 PG4 . H 4 PG4 A 1 206 13 PG4 PG4 . I 4 PG4 A 1 207 14 PG4 PG4 . J 4 PG4 A 1 208 17 PG4 PG4 . K 4 PG4 A 1 209 19 PG4 PG4 . L 4 PG4 A 1 210 20 PG4 PG4 . M 4 PG4 A 1 211 21 PG4 PG4 . N 5 PEG A 1 212 9 PEG PEG . O 5 PEG A 1 213 14 PEG PEG . P 5 PEG A 1 214 20 PEG PEG . Q 5 PEG A 1 215 21 PEG PEG . R 5 PEG A 1 216 27 PEG PEG . S 6 PG0 A 1 217 5 PG0 PG0 . T 7 P6G A 1 218 2 P6G P6G . U 7 P6G A 1 219 3 P6G P6G . V 7 P6G A 1 220 6 P6G P6G . W 7 P6G A 1 221 7 P6G P6G . X 2 BNG B 1 201 1 BNG BNG . Y 2 BNG B 1 202 3 BNG BNG . Z 2 BNG B 1 203 4 BNG BNG . AA 2 BNG B 1 204 5 BNG BNG . BA 2 BNG B 1 205 8 BNG BNG . CA 3 26G B 1 206 2 26G LIG . DA 4 PG4 B 1 207 11 PG4 PG4 . EA 4 PG4 B 1 208 16 PG4 PG4 . FA 4 PG4 B 1 209 18 PG4 PG4 . GA 5 PEG B 1 210 4 PEG PEG . HA 5 PEG B 1 211 5 PEG PEG . IA 5 PEG B 1 212 10 PEG PEG . JA 5 PEG B 1 213 13 PEG PEG . KA 5 PEG B 1 214 16 PEG PEG . LA 5 PEG B 1 215 22 PEG PEG . MA 5 PEG B 1 216 24 PEG PEG . NA 5 PEG B 1 217 25 PEG PEG . OA 5 PEG B 1 218 26 PEG PEG . PA 5 PEG B 1 219 28 PEG PEG . QA 5 PEG B 1 220 29 PEG PEG . RA 5 PEG B 1 221 30 PEG PEG . SA 8 1PE B 1 222 3 1PE 1PE . TA 6 PG0 B 1 223 7 PG0 PG0 . UA 7 P6G B 1 224 1 P6G P6G . VA 7 P6G B 1 225 8 P6G P6G . WA 7 P6G B 1 226 9 P6G P6G . XA 9 HOH A 1 301 1 HOH HOH . XA 9 HOH A 2 302 3 HOH HOH . XA 9 HOH A 3 303 4 HOH HOH . XA 9 HOH A 4 304 9 HOH HOH . XA 9 HOH A 5 305 10 HOH HOH . XA 9 HOH A 6 306 11 HOH HOH . XA 9 HOH A 7 307 13 HOH HOH . XA 9 HOH A 8 308 15 HOH HOH . XA 9 HOH A 9 309 16 HOH HOH . XA 9 HOH A 10 310 19 HOH HOH . XA 9 HOH A 11 311 23 HOH HOH . XA 9 HOH A 12 312 24 HOH HOH . XA 9 HOH A 13 313 25 HOH HOH . XA 9 HOH A 14 314 29 HOH HOH . XA 9 HOH A 15 315 40 HOH HOH . XA 9 HOH A 16 316 42 HOH HOH . XA 9 HOH A 17 317 43 HOH HOH . XA 9 HOH A 18 318 46 HOH HOH . XA 9 HOH A 19 319 49 HOH HOH . XA 9 HOH A 20 320 58 HOH HOH . XA 9 HOH A 21 321 60 HOH HOH . XA 9 HOH A 22 322 64 HOH HOH . XA 9 HOH A 23 323 65 HOH HOH . XA 9 HOH A 24 324 66 HOH HOH . XA 9 HOH A 25 325 70 HOH HOH . XA 9 HOH A 26 326 73 HOH HOH . XA 9 HOH A 27 327 75 HOH HOH . XA 9 HOH A 28 328 78 HOH HOH . XA 9 HOH A 29 329 79 HOH HOH . XA 9 HOH A 30 330 80 HOH HOH . XA 9 HOH A 31 331 82 HOH HOH . XA 9 HOH A 32 332 83 HOH HOH . XA 9 HOH A 33 333 86 HOH HOH . XA 9 HOH A 34 334 88 HOH HOH . XA 9 HOH A 35 335 96 HOH HOH . XA 9 HOH A 36 336 112 HOH HOH . XA 9 HOH A 37 337 124 HOH HOH . XA 9 HOH A 38 338 135 HOH HOH . XA 9 HOH A 39 339 136 HOH HOH . XA 9 HOH A 40 340 140 HOH HOH . XA 9 HOH A 41 341 141 HOH HOH . XA 9 HOH A 42 342 142 HOH HOH . XA 9 HOH A 43 343 154 HOH HOH . XA 9 HOH A 44 344 160 HOH HOH . XA 9 HOH A 45 345 162 HOH HOH . XA 9 HOH A 46 346 163 HOH HOH . XA 9 HOH A 47 347 166 HOH HOH . XA 9 HOH A 48 348 167 HOH HOH . XA 9 HOH A 49 349 168 HOH HOH . XA 9 HOH A 50 350 170 HOH HOH . XA 9 HOH A 51 351 172 HOH HOH . XA 9 HOH A 52 352 176 HOH HOH . XA 9 HOH A 53 353 181 HOH HOH . XA 9 HOH A 54 354 182 HOH HOH . XA 9 HOH A 55 355 186 HOH HOH . XA 9 HOH A 56 356 190 HOH HOH . XA 9 HOH A 57 357 195 HOH HOH . XA 9 HOH A 58 358 198 HOH HOH . XA 9 HOH A 59 359 203 HOH HOH . XA 9 HOH A 60 360 204 HOH HOH . XA 9 HOH A 61 361 206 HOH HOH . XA 9 HOH A 62 362 209 HOH HOH . XA 9 HOH A 63 363 210 HOH HOH . XA 9 HOH A 64 364 211 HOH HOH . XA 9 HOH A 65 365 216 HOH HOH . XA 9 HOH A 66 366 217 HOH HOH . XA 9 HOH A 67 367 223 HOH HOH . XA 9 HOH A 68 368 224 HOH HOH . XA 9 HOH A 69 369 225 HOH HOH . XA 9 HOH A 70 370 226 HOH HOH . YA 9 HOH B 1 301 2 HOH HOH . YA 9 HOH B 2 302 5 HOH HOH . YA 9 HOH B 3 303 6 HOH HOH . YA 9 HOH B 4 304 7 HOH HOH . YA 9 HOH B 5 305 8 HOH HOH . YA 9 HOH B 6 306 12 HOH HOH . YA 9 HOH B 7 307 14 HOH HOH . YA 9 HOH B 8 308 17 HOH HOH . YA 9 HOH B 9 309 20 HOH HOH . YA 9 HOH B 10 310 21 HOH HOH . YA 9 HOH B 11 311 22 HOH HOH . YA 9 HOH B 12 312 26 HOH HOH . YA 9 HOH B 13 313 27 HOH HOH . YA 9 HOH B 14 314 28 HOH HOH . YA 9 HOH B 15 315 31 HOH HOH . YA 9 HOH B 16 316 32 HOH HOH . YA 9 HOH B 17 317 35 HOH HOH . YA 9 HOH B 18 318 36 HOH HOH . YA 9 HOH B 19 319 37 HOH HOH . YA 9 HOH B 20 320 38 HOH HOH . YA 9 HOH B 21 321 39 HOH HOH . YA 9 HOH B 22 322 41 HOH HOH . YA 9 HOH B 23 323 44 HOH HOH . YA 9 HOH B 24 324 45 HOH HOH . YA 9 HOH B 25 325 47 HOH HOH . YA 9 HOH B 26 326 48 HOH HOH . YA 9 HOH B 27 327 50 HOH HOH . YA 9 HOH B 28 328 51 HOH HOH . YA 9 HOH B 29 329 52 HOH HOH . YA 9 HOH B 30 330 53 HOH HOH . YA 9 HOH B 31 331 54 HOH HOH . YA 9 HOH B 32 332 55 HOH HOH . YA 9 HOH B 33 333 56 HOH HOH . YA 9 HOH B 34 334 57 HOH HOH . YA 9 HOH B 35 335 59 HOH HOH . YA 9 HOH B 36 336 61 HOH HOH . YA 9 HOH B 37 337 62 HOH HOH . YA 9 HOH B 38 338 63 HOH HOH . YA 9 HOH B 39 339 67 HOH HOH . YA 9 HOH B 40 340 68 HOH HOH . YA 9 HOH B 41 341 74 HOH HOH . YA 9 HOH B 42 342 76 HOH HOH . YA 9 HOH B 43 343 84 HOH HOH . YA 9 HOH B 44 344 85 HOH HOH . YA 9 HOH B 45 345 87 HOH HOH . YA 9 HOH B 46 346 90 HOH HOH . YA 9 HOH B 47 347 91 HOH HOH . YA 9 HOH B 48 348 93 HOH HOH . YA 9 HOH B 49 349 94 HOH HOH . YA 9 HOH B 50 350 95 HOH HOH . YA 9 HOH B 51 351 98 HOH HOH . YA 9 HOH B 52 352 109 HOH HOH . YA 9 HOH B 53 353 110 HOH HOH . YA 9 HOH B 54 354 113 HOH HOH . YA 9 HOH B 55 355 114 HOH HOH . YA 9 HOH B 56 356 119 HOH HOH . YA 9 HOH B 57 357 120 HOH HOH . YA 9 HOH B 58 358 125 HOH HOH . YA 9 HOH B 59 359 126 HOH HOH . YA 9 HOH B 60 360 128 HOH HOH . YA 9 HOH B 61 361 129 HOH HOH . YA 9 HOH B 62 362 130 HOH HOH . YA 9 HOH B 63 363 131 HOH HOH . YA 9 HOH B 64 364 132 HOH HOH . YA 9 HOH B 65 365 133 HOH HOH . YA 9 HOH B 66 366 143 HOH HOH . YA 9 HOH B 67 367 144 HOH HOH . YA 9 HOH B 68 368 146 HOH HOH . YA 9 HOH B 69 369 147 HOH HOH . YA 9 HOH B 70 370 148 HOH HOH . YA 9 HOH B 71 371 149 HOH HOH . YA 9 HOH B 72 372 150 HOH HOH . YA 9 HOH B 73 373 151 HOH HOH . YA 9 HOH B 74 374 153 HOH HOH . YA 9 HOH B 75 375 155 HOH HOH . YA 9 HOH B 76 376 157 HOH HOH . YA 9 HOH B 77 377 158 HOH HOH . YA 9 HOH B 78 378 161 HOH HOH . YA 9 HOH B 79 379 164 HOH HOH . YA 9 HOH B 80 380 169 HOH HOH . YA 9 HOH B 81 381 171 HOH HOH . YA 9 HOH B 82 382 175 HOH HOH . YA 9 HOH B 83 383 177 HOH HOH . YA 9 HOH B 84 384 178 HOH HOH . YA 9 HOH B 85 385 180 HOH HOH . YA 9 HOH B 86 386 184 HOH HOH . YA 9 HOH B 87 387 185 HOH HOH . YA 9 HOH B 88 388 191 HOH HOH . YA 9 HOH B 89 389 192 HOH HOH . YA 9 HOH B 90 390 193 HOH HOH . YA 9 HOH B 91 391 194 HOH HOH . YA 9 HOH B 92 392 199 HOH HOH . YA 9 HOH B 93 393 200 HOH HOH . YA 9 HOH B 94 394 212 HOH HOH . YA 9 HOH B 95 395 218 HOH HOH . YA 9 HOH B 96 396 219 HOH HOH . YA 9 HOH B 97 397 220 HOH HOH . YA 9 HOH B 98 398 221 HOH HOH . YA 9 HOH B 99 399 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CM2 26G . . . E 3 15.855 22.936 42.135 1 20.71 ? CM2 26G 203 A 1 HETATM 2 N N4A 26G . . . E 3 16.352 19.051 44.934 1 22.95 ? N4A 26G 203 A 1 HETATM 3 C C02 26G . . . E 3 23.055 16.999 48.271 1 38.32 ? C02 26G 203 A 1 HETATM 4 C C6 26G . . . E 3 21.544 16.961 48.149 1 32.78 ? C6 26G 203 A 1 HETATM 5 C C2 26G . . . E 3 19.551 19.089 44.975 1 16.34 ? C2 26G 203 A 1 HETATM 6 C C5 26G . . . E 3 20.868 17.725 47.01 1 25.68 ? C5 26G 203 A 1 HETATM 7 C C4 26G . . . E 3 19.901 18.699 47.322 1 21.89 ? C4 26G 203 A 1 HETATM 8 C C01 26G . . . E 3 19.242 19.384 46.318 1 15.68 ? C01 26G 203 A 1 HETATM 9 C C7A 26G . . . E 3 18.205 20.446 46.727 1 23.66 ? C7A 26G 203 A 1 HETATM 10 C C4A 26G . . . E 3 16.67 20.402 44.684 1 21.88 ? C4A 26G 203 A 1 HETATM 11 N N3A 26G . . . E 3 16.164 21.024 43.605 1 21.54 ? N3A 26G 203 A 1 HETATM 12 C C2A 26G . . . E 3 16.472 22.282 43.349 1 19.4 ? C2A 26G 203 A 1 HETATM 13 N N1A 26G . . . E 3 17.281 22.992 44.096 1 19.39 ? N1A 26G 203 A 1 HETATM 14 C C6A 26G . . . E 3 17.853 22.462 45.195 1 21.24 ? C6A 26G 203 A 1 HETATM 15 C C5A 26G . . . E 3 17.574 21.102 45.514 1 20.82 ? C5A 26G 203 A 1 HETATM 16 C C28 26G . . . E 3 21.15 17.433 45.678 1 24.1 ? C28 26G 203 A 1 HETATM 17 C C30 26G . . . E 3 20.501 18.12 44.652 1 20.87 ? C30 26G 203 A 1 HETATM 18 O O31 26G . . . E 3 23.533 18.324 48.304 1 45.38 ? O31 26G 203 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #