data_4MES # _model_server_result.job_id -LCiSAzWnuoiZtlPAHp8ow _model_server_result.datetime_utc '2024-11-22 22:00:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mes # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VA","auth_seq_id":225}' # _entry.id 4MES # _exptl.entry_id 4MES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.52 _cell.angle_gamma 90 _cell.entry_id 4MES _cell.length_a 61.53 _cell.length_b 84.2 _cell.length_c 127.21 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MES _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,XA 1 1 B,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,YA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 T N N ? 7 U N N ? 7 V N N ? 7 W N N ? 7 UA N N ? 7 VA N N ? 7 WA N N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 346 n n O1 H1 P6G sing 347 n n C2 C3 P6G sing 348 n n C2 H21 P6G sing 349 n n C2 H22 P6G sing 350 n n C3 O4 P6G sing 351 n n C3 H31 P6G sing 352 n n C3 H32 P6G sing 353 n n O4 C5 P6G sing 354 n n C5 C6 P6G sing 355 n n C5 H51 P6G sing 356 n n C5 H52 P6G sing 357 n n C6 O7 P6G sing 358 n n C6 H61 P6G sing 359 n n C6 H62 P6G sing 360 n n O7 C8 P6G sing 361 n n C8 C9 P6G sing 362 n n C8 H81 P6G sing 363 n n C8 H82 P6G sing 364 n n C9 O10 P6G sing 365 n n C9 H91 P6G sing 366 n n C9 H92 P6G sing 367 n n O10 C11 P6G sing 368 n n C11 C12 P6G sing 369 n n C11 H111 P6G sing 370 n n C11 H112 P6G sing 371 n n C12 O13 P6G sing 372 n n C12 H121 P6G sing 373 n n C12 H122 P6G sing 374 n n O13 C14 P6G sing 375 n n C14 C15 P6G sing 376 n n C14 H141 P6G sing 377 n n C14 H142 P6G sing 378 n n C15 O16 P6G sing 379 n n C15 H151 P6G sing 380 n n C15 H152 P6G sing 381 n n O16 C17 P6G sing 382 n n C17 C18 P6G sing 383 n n C17 H171 P6G sing 384 n n C17 H172 P6G sing 385 n n C18 O19 P6G sing 386 n n C18 H181 P6G sing 387 n n C18 H182 P6G sing 388 n n O19 H19 P6G sing 389 n n # _atom_sites.entry_id 4MES _atom_sites.fract_transf_matrix[1][1] 0.016252 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001001 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011876 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007876 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BNG A 1 201 2 BNG BNG . D 2 BNG A 1 202 7 BNG BNG . E 3 26G A 1 203 1 26G LIG . F 4 PG4 A 1 204 5 PG4 PG4 . G 4 PG4 A 1 205 12 PG4 PG4 . H 4 PG4 A 1 206 13 PG4 PG4 . I 4 PG4 A 1 207 14 PG4 PG4 . J 4 PG4 A 1 208 17 PG4 PG4 . K 4 PG4 A 1 209 19 PG4 PG4 . L 4 PG4 A 1 210 20 PG4 PG4 . M 4 PG4 A 1 211 21 PG4 PG4 . N 5 PEG A 1 212 9 PEG PEG . O 5 PEG A 1 213 14 PEG PEG . P 5 PEG A 1 214 20 PEG PEG . Q 5 PEG A 1 215 21 PEG PEG . R 5 PEG A 1 216 27 PEG PEG . S 6 PG0 A 1 217 5 PG0 PG0 . T 7 P6G A 1 218 2 P6G P6G . U 7 P6G A 1 219 3 P6G P6G . V 7 P6G A 1 220 6 P6G P6G . W 7 P6G A 1 221 7 P6G P6G . X 2 BNG B 1 201 1 BNG BNG . Y 2 BNG B 1 202 3 BNG BNG . Z 2 BNG B 1 203 4 BNG BNG . AA 2 BNG B 1 204 5 BNG BNG . BA 2 BNG B 1 205 8 BNG BNG . CA 3 26G B 1 206 2 26G LIG . DA 4 PG4 B 1 207 11 PG4 PG4 . EA 4 PG4 B 1 208 16 PG4 PG4 . FA 4 PG4 B 1 209 18 PG4 PG4 . GA 5 PEG B 1 210 4 PEG PEG . HA 5 PEG B 1 211 5 PEG PEG . IA 5 PEG B 1 212 10 PEG PEG . JA 5 PEG B 1 213 13 PEG PEG . KA 5 PEG B 1 214 16 PEG PEG . LA 5 PEG B 1 215 22 PEG PEG . MA 5 PEG B 1 216 24 PEG PEG . NA 5 PEG B 1 217 25 PEG PEG . OA 5 PEG B 1 218 26 PEG PEG . PA 5 PEG B 1 219 28 PEG PEG . QA 5 PEG B 1 220 29 PEG PEG . RA 5 PEG B 1 221 30 PEG PEG . SA 8 1PE B 1 222 3 1PE 1PE . TA 6 PG0 B 1 223 7 PG0 PG0 . UA 7 P6G B 1 224 1 P6G P6G . VA 7 P6G B 1 225 8 P6G P6G . WA 7 P6G B 1 226 9 P6G P6G . XA 9 HOH A 1 301 1 HOH HOH . XA 9 HOH A 2 302 3 HOH HOH . XA 9 HOH A 3 303 4 HOH HOH . XA 9 HOH A 4 304 9 HOH HOH . XA 9 HOH A 5 305 10 HOH HOH . XA 9 HOH A 6 306 11 HOH HOH . XA 9 HOH A 7 307 13 HOH HOH . XA 9 HOH A 8 308 15 HOH HOH . XA 9 HOH A 9 309 16 HOH HOH . XA 9 HOH A 10 310 19 HOH HOH . XA 9 HOH A 11 311 23 HOH HOH . XA 9 HOH A 12 312 24 HOH HOH . XA 9 HOH A 13 313 25 HOH HOH . XA 9 HOH A 14 314 29 HOH HOH . XA 9 HOH A 15 315 40 HOH HOH . XA 9 HOH A 16 316 42 HOH HOH . XA 9 HOH A 17 317 43 HOH HOH . XA 9 HOH A 18 318 46 HOH HOH . XA 9 HOH A 19 319 49 HOH HOH . XA 9 HOH A 20 320 58 HOH HOH . XA 9 HOH A 21 321 60 HOH HOH . XA 9 HOH A 22 322 64 HOH HOH . XA 9 HOH A 23 323 65 HOH HOH . XA 9 HOH A 24 324 66 HOH HOH . XA 9 HOH A 25 325 70 HOH HOH . XA 9 HOH A 26 326 73 HOH HOH . XA 9 HOH A 27 327 75 HOH HOH . XA 9 HOH A 28 328 78 HOH HOH . XA 9 HOH A 29 329 79 HOH HOH . XA 9 HOH A 30 330 80 HOH HOH . XA 9 HOH A 31 331 82 HOH HOH . XA 9 HOH A 32 332 83 HOH HOH . XA 9 HOH A 33 333 86 HOH HOH . XA 9 HOH A 34 334 88 HOH HOH . XA 9 HOH A 35 335 96 HOH HOH . XA 9 HOH A 36 336 112 HOH HOH . XA 9 HOH A 37 337 124 HOH HOH . XA 9 HOH A 38 338 135 HOH HOH . XA 9 HOH A 39 339 136 HOH HOH . XA 9 HOH A 40 340 140 HOH HOH . XA 9 HOH A 41 341 141 HOH HOH . XA 9 HOH A 42 342 142 HOH HOH . XA 9 HOH A 43 343 154 HOH HOH . XA 9 HOH A 44 344 160 HOH HOH . XA 9 HOH A 45 345 162 HOH HOH . XA 9 HOH A 46 346 163 HOH HOH . XA 9 HOH A 47 347 166 HOH HOH . XA 9 HOH A 48 348 167 HOH HOH . XA 9 HOH A 49 349 168 HOH HOH . XA 9 HOH A 50 350 170 HOH HOH . XA 9 HOH A 51 351 172 HOH HOH . XA 9 HOH A 52 352 176 HOH HOH . XA 9 HOH A 53 353 181 HOH HOH . XA 9 HOH A 54 354 182 HOH HOH . XA 9 HOH A 55 355 186 HOH HOH . XA 9 HOH A 56 356 190 HOH HOH . XA 9 HOH A 57 357 195 HOH HOH . XA 9 HOH A 58 358 198 HOH HOH . XA 9 HOH A 59 359 203 HOH HOH . XA 9 HOH A 60 360 204 HOH HOH . XA 9 HOH A 61 361 206 HOH HOH . XA 9 HOH A 62 362 209 HOH HOH . XA 9 HOH A 63 363 210 HOH HOH . XA 9 HOH A 64 364 211 HOH HOH . XA 9 HOH A 65 365 216 HOH HOH . XA 9 HOH A 66 366 217 HOH HOH . XA 9 HOH A 67 367 223 HOH HOH . XA 9 HOH A 68 368 224 HOH HOH . XA 9 HOH A 69 369 225 HOH HOH . XA 9 HOH A 70 370 226 HOH HOH . YA 9 HOH B 1 301 2 HOH HOH . YA 9 HOH B 2 302 5 HOH HOH . YA 9 HOH B 3 303 6 HOH HOH . YA 9 HOH B 4 304 7 HOH HOH . YA 9 HOH B 5 305 8 HOH HOH . YA 9 HOH B 6 306 12 HOH HOH . YA 9 HOH B 7 307 14 HOH HOH . YA 9 HOH B 8 308 17 HOH HOH . YA 9 HOH B 9 309 20 HOH HOH . YA 9 HOH B 10 310 21 HOH HOH . YA 9 HOH B 11 311 22 HOH HOH . YA 9 HOH B 12 312 26 HOH HOH . YA 9 HOH B 13 313 27 HOH HOH . YA 9 HOH B 14 314 28 HOH HOH . YA 9 HOH B 15 315 31 HOH HOH . YA 9 HOH B 16 316 32 HOH HOH . YA 9 HOH B 17 317 35 HOH HOH . YA 9 HOH B 18 318 36 HOH HOH . YA 9 HOH B 19 319 37 HOH HOH . YA 9 HOH B 20 320 38 HOH HOH . YA 9 HOH B 21 321 39 HOH HOH . YA 9 HOH B 22 322 41 HOH HOH . YA 9 HOH B 23 323 44 HOH HOH . YA 9 HOH B 24 324 45 HOH HOH . YA 9 HOH B 25 325 47 HOH HOH . YA 9 HOH B 26 326 48 HOH HOH . YA 9 HOH B 27 327 50 HOH HOH . YA 9 HOH B 28 328 51 HOH HOH . YA 9 HOH B 29 329 52 HOH HOH . YA 9 HOH B 30 330 53 HOH HOH . YA 9 HOH B 31 331 54 HOH HOH . YA 9 HOH B 32 332 55 HOH HOH . YA 9 HOH B 33 333 56 HOH HOH . YA 9 HOH B 34 334 57 HOH HOH . YA 9 HOH B 35 335 59 HOH HOH . YA 9 HOH B 36 336 61 HOH HOH . YA 9 HOH B 37 337 62 HOH HOH . YA 9 HOH B 38 338 63 HOH HOH . YA 9 HOH B 39 339 67 HOH HOH . YA 9 HOH B 40 340 68 HOH HOH . YA 9 HOH B 41 341 74 HOH HOH . YA 9 HOH B 42 342 76 HOH HOH . YA 9 HOH B 43 343 84 HOH HOH . YA 9 HOH B 44 344 85 HOH HOH . YA 9 HOH B 45 345 87 HOH HOH . YA 9 HOH B 46 346 90 HOH HOH . YA 9 HOH B 47 347 91 HOH HOH . YA 9 HOH B 48 348 93 HOH HOH . YA 9 HOH B 49 349 94 HOH HOH . YA 9 HOH B 50 350 95 HOH HOH . YA 9 HOH B 51 351 98 HOH HOH . YA 9 HOH B 52 352 109 HOH HOH . YA 9 HOH B 53 353 110 HOH HOH . YA 9 HOH B 54 354 113 HOH HOH . YA 9 HOH B 55 355 114 HOH HOH . YA 9 HOH B 56 356 119 HOH HOH . YA 9 HOH B 57 357 120 HOH HOH . YA 9 HOH B 58 358 125 HOH HOH . YA 9 HOH B 59 359 126 HOH HOH . YA 9 HOH B 60 360 128 HOH HOH . YA 9 HOH B 61 361 129 HOH HOH . YA 9 HOH B 62 362 130 HOH HOH . YA 9 HOH B 63 363 131 HOH HOH . YA 9 HOH B 64 364 132 HOH HOH . YA 9 HOH B 65 365 133 HOH HOH . YA 9 HOH B 66 366 143 HOH HOH . YA 9 HOH B 67 367 144 HOH HOH . YA 9 HOH B 68 368 146 HOH HOH . YA 9 HOH B 69 369 147 HOH HOH . YA 9 HOH B 70 370 148 HOH HOH . YA 9 HOH B 71 371 149 HOH HOH . YA 9 HOH B 72 372 150 HOH HOH . YA 9 HOH B 73 373 151 HOH HOH . YA 9 HOH B 74 374 153 HOH HOH . YA 9 HOH B 75 375 155 HOH HOH . YA 9 HOH B 76 376 157 HOH HOH . YA 9 HOH B 77 377 158 HOH HOH . YA 9 HOH B 78 378 161 HOH HOH . YA 9 HOH B 79 379 164 HOH HOH . YA 9 HOH B 80 380 169 HOH HOH . YA 9 HOH B 81 381 171 HOH HOH . YA 9 HOH B 82 382 175 HOH HOH . YA 9 HOH B 83 383 177 HOH HOH . YA 9 HOH B 84 384 178 HOH HOH . YA 9 HOH B 85 385 180 HOH HOH . YA 9 HOH B 86 386 184 HOH HOH . YA 9 HOH B 87 387 185 HOH HOH . YA 9 HOH B 88 388 191 HOH HOH . YA 9 HOH B 89 389 192 HOH HOH . YA 9 HOH B 90 390 193 HOH HOH . YA 9 HOH B 91 391 194 HOH HOH . YA 9 HOH B 92 392 199 HOH HOH . YA 9 HOH B 93 393 200 HOH HOH . YA 9 HOH B 94 394 212 HOH HOH . YA 9 HOH B 95 395 218 HOH HOH . YA 9 HOH B 96 396 219 HOH HOH . YA 9 HOH B 97 397 220 HOH HOH . YA 9 HOH B 98 398 221 HOH HOH . YA 9 HOH B 99 399 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . VA 7 11.413 18.554 28.178 1 69.88 ? O1 P6G 225 B 1 HETATM 2 C C2 P6G . . . VA 7 12.216 17.488 28.583 1 67.75 ? C2 P6G 225 B 1 HETATM 3 C C3 P6G . . . VA 7 13.517 17.514 27.787 1 71.96 ? C3 P6G 225 B 1 HETATM 4 O O4 P6G . . . VA 7 14.497 16.668 28.403 1 78.19 ? O4 P6G 225 B 1 HETATM 5 C C5 P6G . . . VA 7 14.202 15.26 28.352 1 79.82 ? C5 P6G 225 B 1 HETATM 6 C C6 P6G . . . VA 7 15.414 14.529 27.7 1 62.7 ? C6 P6G 225 B 1 HETATM 7 O O7 P6G . . . VA 7 15.932 13.554 28.584 1 63.15 ? O7 P6G 225 B 1 HETATM 8 C C8 P6G . . . VA 7 17.269 13.838 29.008 1 67.16 ? C8 P6G 225 B 1 HETATM 9 C C9 P6G . . . VA 7 18.29 13.425 27.937 1 55.96 ? C9 P6G 225 B 1 HETATM 10 O O10 P6G . . . VA 7 17.974 12.083 27.524 1 48.27 ? O10 P6G 225 B 1 HETATM 11 C C11 P6G . . . VA 7 19.028 11.14 27.695 1 45.98 ? C11 P6G 225 B 1 HETATM 12 C C12 P6G . . . VA 7 20.035 11.221 26.528 1 34.11 ? C12 P6G 225 B 1 HETATM 13 O O13 P6G . . . VA 7 20.803 12.446 26.669 1 44.01 ? O13 P6G 225 B 1 HETATM 14 C C14 P6G . . . VA 7 21.586 12.538 27.876 1 42.54 ? C14 P6G 225 B 1 HETATM 15 C C15 P6G . . . VA 7 23.094 12.456 27.541 1 40.46 ? C15 P6G 225 B 1 HETATM 16 O O16 P6G . . . VA 7 23.856 12.72 28.724 1 47.65 ? O16 P6G 225 B 1 HETATM 17 C C17 P6G . . . VA 7 25.172 13.241 28.482 1 41.39 ? C17 P6G 225 B 1 HETATM 18 C C18 P6G . . . VA 7 25.11 14.677 27.989 1 36.67 ? C18 P6G 225 B 1 HETATM 19 O O19 P6G . . . VA 7 26.361 15.267 28.127 1 35.54 ? O19 P6G 225 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 19 #