data_4MGB # _model_server_result.job_id VLEGqYpgzL9uXoheA0K7Fw _model_server_result.datetime_utc '2024-11-08 20:50:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mgb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 4MGB # _exptl.entry_id 4MGB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.067 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-propane-2,2-diylbis(2,6-dichlorophenol)" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.32 _cell.angle_gamma 90 _cell.entry_id 4MGB _cell.length_a 54.67 _cell.length_b 81.55 _cell.length_c 58.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MGB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 83 A GLU 380 1_555 A N CSO 84 A CSO 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C CSO 84 A CSO 381 1_555 A N ALA 85 A ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B C GLU 83 B GLU 380 1_555 B N CSO 84 B CSO 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C CSO 84 B CSO 381 1_555 B N ALA 85 B ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 B C LYS 232 B LYS 529 1_555 B N CSO 233 B CSO 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 B C CSO 233 B CSO 530 1_555 B N LYS 234 B LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C15 H12 Cl4 O2' _chem_comp.formula_weight 366.067 _chem_comp.id XDH _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-propane-2,2-diylbis(2,6-dichlorophenol)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAU XDH sing 403 n n CAA HAA XDH sing 404 n n CAA HAAA XDH sing 405 n n CAA HAAB XDH sing 406 n n CAB CAU XDH sing 407 n n CAB HAB XDH sing 408 n n CAB HABA XDH sing 409 n n CAB HABB XDH sing 410 n n CAM OAC XDH sing 411 n n OAC HOAC XDH sing 412 n n OAD CAN XDH sing 413 n n OAD HOAD XDH sing 414 n n CAO CLAE XDH sing 415 n n CAP CLAF XDH sing 416 n n CLAG CAQ XDH sing 417 n n CLAH CAR XDH sing 418 n n CAS CAI XDH doub 419 n y CAI CAO XDH sing 420 n y CAI HAI XDH sing 421 n n CAS CAJ XDH sing 422 n y CAJ CAP XDH doub 423 n y CAJ HAJ XDH sing 424 n n CAQ CAK XDH doub 425 n y CAK CAT XDH sing 426 n y CAK HAK XDH sing 427 n n CAR CAL XDH sing 428 n y CAL CAT XDH doub 429 n y CAL HAL XDH sing 430 n n CAP CAM XDH sing 431 n y CAO CAM XDH doub 432 n y CAN CAR XDH doub 433 n y CAN CAQ XDH sing 434 n y CAU CAS XDH sing 435 n n CAT CAU XDH sing 436 n n # _atom_sites.entry_id 4MGB _atom_sites.fract_transf_matrix[1][1] 0.018292 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006774 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01816 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 XDH A 1 601 1 XDH DRG . F 4 XDH B 1 601 1 XDH DRG . G 5 GOL B 1 602 1 GOL GOL . H 5 GOL B 1 603 2 GOL GOL . I 6 HOH A 1 701 1 HOH HOH . I 6 HOH A 2 702 3 HOH HOH . I 6 HOH A 3 703 4 HOH HOH . I 6 HOH A 4 704 5 HOH HOH . I 6 HOH A 5 705 10 HOH HOH . I 6 HOH A 6 706 11 HOH HOH . I 6 HOH A 7 707 12 HOH HOH . I 6 HOH A 8 708 15 HOH HOH . I 6 HOH A 9 709 16 HOH HOH . I 6 HOH A 10 710 18 HOH HOH . I 6 HOH A 11 711 21 HOH HOH . I 6 HOH A 12 712 24 HOH HOH . I 6 HOH A 13 713 28 HOH HOH . I 6 HOH A 14 714 29 HOH HOH . I 6 HOH A 15 715 30 HOH HOH . I 6 HOH A 16 716 31 HOH HOH . I 6 HOH A 17 717 32 HOH HOH . I 6 HOH A 18 718 35 HOH HOH . I 6 HOH A 19 719 37 HOH HOH . I 6 HOH A 20 720 38 HOH HOH . I 6 HOH A 21 721 39 HOH HOH . I 6 HOH A 22 722 42 HOH HOH . I 6 HOH A 23 723 43 HOH HOH . I 6 HOH A 24 724 51 HOH HOH . I 6 HOH A 25 725 52 HOH HOH . I 6 HOH A 26 726 53 HOH HOH . I 6 HOH A 27 727 54 HOH HOH . I 6 HOH A 28 728 55 HOH HOH . I 6 HOH A 29 729 57 HOH HOH . I 6 HOH A 30 730 60 HOH HOH . I 6 HOH A 31 731 65 HOH HOH . I 6 HOH A 32 732 69 HOH HOH . I 6 HOH A 33 733 71 HOH HOH . I 6 HOH A 34 734 72 HOH HOH . I 6 HOH A 35 735 73 HOH HOH . I 6 HOH A 36 736 81 HOH HOH . I 6 HOH A 37 737 82 HOH HOH . I 6 HOH A 38 738 84 HOH HOH . I 6 HOH A 39 739 93 HOH HOH . I 6 HOH A 40 740 95 HOH HOH . I 6 HOH A 41 741 96 HOH HOH . I 6 HOH A 42 742 97 HOH HOH . I 6 HOH A 43 743 98 HOH HOH . I 6 HOH A 44 744 106 HOH HOH . I 6 HOH A 45 745 107 HOH HOH . I 6 HOH A 46 746 109 HOH HOH . I 6 HOH A 47 747 114 HOH HOH . I 6 HOH A 48 748 115 HOH HOH . I 6 HOH A 49 749 117 HOH HOH . I 6 HOH A 50 750 119 HOH HOH . I 6 HOH A 51 751 120 HOH HOH . I 6 HOH A 52 752 121 HOH HOH . I 6 HOH A 53 753 122 HOH HOH . I 6 HOH A 54 754 124 HOH HOH . I 6 HOH A 55 755 127 HOH HOH . I 6 HOH A 56 756 133 HOH HOH . I 6 HOH A 57 757 141 HOH HOH . I 6 HOH A 58 758 153 HOH HOH . I 6 HOH A 59 759 155 HOH HOH . I 6 HOH A 60 760 158 HOH HOH . I 6 HOH A 61 761 159 HOH HOH . I 6 HOH A 62 762 164 HOH HOH . I 6 HOH A 63 763 172 HOH HOH . I 6 HOH A 64 764 186 HOH HOH . I 6 HOH A 65 765 188 HOH HOH . I 6 HOH A 66 766 193 HOH HOH . I 6 HOH A 67 767 198 HOH HOH . I 6 HOH A 68 768 201 HOH HOH . I 6 HOH A 69 769 205 HOH HOH . I 6 HOH A 70 770 211 HOH HOH . I 6 HOH A 71 771 212 HOH HOH . I 6 HOH A 72 772 213 HOH HOH . I 6 HOH A 73 773 214 HOH HOH . I 6 HOH A 74 774 217 HOH HOH . I 6 HOH A 75 775 218 HOH HOH . I 6 HOH A 76 776 219 HOH HOH . I 6 HOH A 77 777 220 HOH HOH . I 6 HOH A 78 778 236 HOH HOH . I 6 HOH A 79 779 243 HOH HOH . I 6 HOH A 80 780 244 HOH HOH . I 6 HOH A 81 781 245 HOH HOH . I 6 HOH A 82 782 247 HOH HOH . I 6 HOH A 83 783 251 HOH HOH . I 6 HOH A 84 784 255 HOH HOH . I 6 HOH A 85 785 256 HOH HOH . I 6 HOH A 86 786 257 HOH HOH . J 6 HOH B 1 701 2 HOH HOH . J 6 HOH B 2 702 6 HOH HOH . J 6 HOH B 3 703 7 HOH HOH . J 6 HOH B 4 704 8 HOH HOH . J 6 HOH B 5 705 9 HOH HOH . J 6 HOH B 6 706 13 HOH HOH . J 6 HOH B 7 707 14 HOH HOH . J 6 HOH B 8 708 17 HOH HOH . J 6 HOH B 9 709 19 HOH HOH . J 6 HOH B 10 710 22 HOH HOH . J 6 HOH B 11 711 25 HOH HOH . J 6 HOH B 12 712 26 HOH HOH . J 6 HOH B 13 713 27 HOH HOH . J 6 HOH B 14 714 33 HOH HOH . J 6 HOH B 15 715 34 HOH HOH . J 6 HOH B 16 716 36 HOH HOH . J 6 HOH B 17 717 40 HOH HOH . J 6 HOH B 18 718 41 HOH HOH . J 6 HOH B 19 719 44 HOH HOH . J 6 HOH B 20 720 46 HOH HOH . J 6 HOH B 21 721 47 HOH HOH . J 6 HOH B 22 722 48 HOH HOH . J 6 HOH B 23 723 50 HOH HOH . J 6 HOH B 24 724 58 HOH HOH . J 6 HOH B 25 725 62 HOH HOH . J 6 HOH B 26 726 63 HOH HOH . J 6 HOH B 27 727 64 HOH HOH . J 6 HOH B 28 728 66 HOH HOH . J 6 HOH B 29 729 67 HOH HOH . J 6 HOH B 30 730 70 HOH HOH . J 6 HOH B 31 731 76 HOH HOH . J 6 HOH B 32 732 85 HOH HOH . J 6 HOH B 33 733 86 HOH HOH . J 6 HOH B 34 734 87 HOH HOH . J 6 HOH B 35 735 88 HOH HOH . J 6 HOH B 36 736 89 HOH HOH . J 6 HOH B 37 737 90 HOH HOH . J 6 HOH B 38 738 91 HOH HOH . J 6 HOH B 39 739 92 HOH HOH . J 6 HOH B 40 740 99 HOH HOH . J 6 HOH B 41 741 100 HOH HOH . J 6 HOH B 42 742 101 HOH HOH . J 6 HOH B 43 743 102 HOH HOH . J 6 HOH B 44 744 103 HOH HOH . J 6 HOH B 45 745 105 HOH HOH . J 6 HOH B 46 746 110 HOH HOH . J 6 HOH B 47 747 113 HOH HOH . J 6 HOH B 48 748 116 HOH HOH . J 6 HOH B 49 749 118 HOH HOH . J 6 HOH B 50 750 125 HOH HOH . J 6 HOH B 51 751 126 HOH HOH . J 6 HOH B 52 752 130 HOH HOH . J 6 HOH B 53 753 132 HOH HOH . J 6 HOH B 54 754 136 HOH HOH . J 6 HOH B 55 755 144 HOH HOH . J 6 HOH B 56 756 148 HOH HOH . J 6 HOH B 57 757 149 HOH HOH . J 6 HOH B 58 758 154 HOH HOH . J 6 HOH B 59 759 157 HOH HOH . J 6 HOH B 60 760 177 HOH HOH . J 6 HOH B 61 761 209 HOH HOH . J 6 HOH B 62 762 210 HOH HOH . J 6 HOH B 63 763 215 HOH HOH . J 6 HOH B 64 764 216 HOH HOH . J 6 HOH B 65 765 221 HOH HOH . J 6 HOH B 66 766 222 HOH HOH . J 6 HOH B 67 767 223 HOH HOH . J 6 HOH B 68 768 224 HOH HOH . J 6 HOH B 69 769 225 HOH HOH . J 6 HOH B 70 770 226 HOH HOH . J 6 HOH B 71 771 227 HOH HOH . J 6 HOH B 72 772 228 HOH HOH . J 6 HOH B 73 773 229 HOH HOH . J 6 HOH B 74 774 230 HOH HOH . J 6 HOH B 75 775 232 HOH HOH . J 6 HOH B 76 776 233 HOH HOH . J 6 HOH B 77 777 234 HOH HOH . J 6 HOH B 78 778 235 HOH HOH . J 6 HOH B 79 779 237 HOH HOH . J 6 HOH B 80 780 238 HOH HOH . J 6 HOH B 81 781 239 HOH HOH . J 6 HOH B 82 782 240 HOH HOH . J 6 HOH B 83 783 242 HOH HOH . J 6 HOH B 84 784 246 HOH HOH . J 6 HOH B 85 785 248 HOH HOH . J 6 HOH B 86 786 250 HOH HOH . J 6 HOH B 87 787 252 HOH HOH . J 6 HOH B 88 788 253 HOH HOH . J 6 HOH B 89 789 254 HOH HOH . K 6 HOH C 1 701 165 HOH HOH . K 6 HOH C 2 702 207 HOH HOH . K 6 HOH C 3 703 241 HOH HOH . L 6 HOH D 1 701 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA XDH . . . E 4 -4.98 -6.245 21.699 1 37.65 ? CAA XDH 601 A 1 HETATM 2 C CAB XDH . . . E 4 -5.85 -5.094 19.675 1 41.18 ? CAB XDH 601 A 1 HETATM 3 O OAC XDH . . . E 4 -0.425 -2.236 20.439 1 41.48 ? OAC XDH 601 A 1 HETATM 4 O OAD XDH . . . E 4 -8.827 -1.996 24.073 0.77 42.77 ? OAD XDH 601 A 1 HETATM 5 CL CLAE XDH . . . E 4 -1.618 -3.123 17.963 0.6 38.22 ? CLAE XDH 601 A 1 HETATM 6 CL CLAF XDH . . . E 4 -1.242 -2.437 23.234 0.74 38.48 ? CLAF XDH 601 A 1 HETATM 7 CL CLAG XDH . . . E 4 -8.735 -4.861 24.791 0.34 38.64 ? CLAG XDH 601 A 1 HETATM 8 CL CLAH XDH . . . E 4 -7.401 -0.374 22.095 0.27 40.31 ? CLAH XDH 601 A 1 HETATM 9 C CAI XDH . . . E 4 -3.481 -4.016 19.667 1 38.62 ? CAI XDH 601 A 1 HETATM 10 C CAJ XDH . . . E 4 -3.33 -3.718 22.061 1 35.19 ? CAJ XDH 601 A 1 HETATM 11 C CAK XDH . . . E 4 -6.891 -4.793 22.805 0.69 39.03 ? CAK XDH 601 A 1 HETATM 12 C CAL XDH . . . E 4 -6.292 -2.784 21.592 0.88 37.99 ? CAL XDH 601 A 1 HETATM 13 C CAM XDH . . . E 4 -1.611 -2.884 20.616 1 38.28 ? CAM XDH 601 A 1 HETATM 14 C CAN XDH . . . E 4 -7.938 -2.713 23.329 0.57 40.91 ? CAN XDH 601 A 1 HETATM 15 C CAO XDH . . . E 4 -2.274 -3.357 19.504 1 36.86 ? CAO XDH 601 A 1 HETATM 16 C CAP XDH . . . E 4 -2.114 -3.049 21.898 1 37.24 ? CAP XDH 601 A 1 HETATM 17 C CAQ XDH . . . E 4 -7.803 -4.073 23.568 0.77 39.82 ? CAQ XDH 601 A 1 HETATM 18 C CAR XDH . . . E 4 -7.199 -2.056 22.356 0.56 40.7 ? CAR XDH 601 A 1 HETATM 19 C CAS XDH . . . E 4 -4.017 -4.196 20.939 1 39.62 ? CAS XDH 601 A 1 HETATM 20 C CAT XDH . . . E 4 -6.139 -4.149 21.822 0.79 37.67 ? CAT XDH 601 A 1 HETATM 21 C CAU XDH . . . E 4 -5.234 -4.879 21.057 1 40.14 ? CAU XDH 601 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #