data_4MGE # _model_server_result.job_id 3n1eeLrOn30sQIYej0HkHg _model_server_result.datetime_utc '2024-10-11 06:21:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mge # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4MGE # _exptl.entry_id 4MGE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MGE _cell.length_a 59.788 _cell.length_b 70.802 _cell.length_c 84.464 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MGE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F 2 1 A,C,D,E 3 1 B,F 3 2 A,C,D,E 4 1,3 B,F 4 4,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_556 x+1/2,-y+1/2,-z+1 1 0 0 0 -1 0 0 0 -1 29.894 35.401 84.464 3 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 70.802 84.464 4 'crystal symmetry operation' 5_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 29.894 35.401 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 7 A CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4MGE _atom_sites.fract_transf_matrix[1][1] 0.016726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011839 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 201 1 CL CL . D 3 EDO A 1 202 2 EDO EDO . E 4 HOH A 1 301 3 HOH HOH . E 4 HOH A 2 302 4 HOH HOH . E 4 HOH A 3 303 5 HOH HOH . E 4 HOH A 4 304 11 HOH HOH . E 4 HOH A 5 305 12 HOH HOH . E 4 HOH A 6 306 14 HOH HOH . E 4 HOH A 7 307 15 HOH HOH . E 4 HOH A 8 308 16 HOH HOH . E 4 HOH A 9 309 17 HOH HOH . E 4 HOH A 10 310 18 HOH HOH . E 4 HOH A 11 311 24 HOH HOH . E 4 HOH A 12 312 25 HOH HOH . E 4 HOH A 13 313 26 HOH HOH . E 4 HOH A 14 314 27 HOH HOH . E 4 HOH A 15 315 28 HOH HOH . E 4 HOH A 16 316 29 HOH HOH . E 4 HOH A 17 317 31 HOH HOH . E 4 HOH A 18 318 36 HOH HOH . E 4 HOH A 19 319 37 HOH HOH . E 4 HOH A 20 320 38 HOH HOH . E 4 HOH A 21 321 39 HOH HOH . E 4 HOH A 22 322 40 HOH HOH . E 4 HOH A 23 323 42 HOH HOH . E 4 HOH A 24 324 45 HOH HOH . E 4 HOH A 25 325 47 HOH HOH . E 4 HOH A 26 326 48 HOH HOH . E 4 HOH A 27 327 53 HOH HOH . E 4 HOH A 28 328 54 HOH HOH . E 4 HOH A 29 329 55 HOH HOH . E 4 HOH A 30 330 59 HOH HOH . E 4 HOH A 31 331 61 HOH HOH . E 4 HOH A 32 332 62 HOH HOH . E 4 HOH A 33 333 63 HOH HOH . F 4 HOH B 1 201 6 HOH HOH . F 4 HOH B 2 202 7 HOH HOH . F 4 HOH B 3 203 9 HOH HOH . F 4 HOH B 4 204 10 HOH HOH . F 4 HOH B 5 205 13 HOH HOH . F 4 HOH B 6 206 19 HOH HOH . F 4 HOH B 7 207 20 HOH HOH . F 4 HOH B 8 208 22 HOH HOH . F 4 HOH B 9 209 30 HOH HOH . F 4 HOH B 10 210 32 HOH HOH . F 4 HOH B 11 211 33 HOH HOH . F 4 HOH B 12 212 34 HOH HOH . F 4 HOH B 13 213 41 HOH HOH . F 4 HOH B 14 214 43 HOH HOH . F 4 HOH B 15 215 44 HOH HOH . F 4 HOH B 16 216 46 HOH HOH . F 4 HOH B 17 217 49 HOH HOH . F 4 HOH B 18 218 50 HOH HOH . F 4 HOH B 19 219 52 HOH HOH . F 4 HOH B 20 220 56 HOH HOH . F 4 HOH B 21 221 57 HOH HOH . F 4 HOH B 22 222 58 HOH HOH . F 4 HOH B 23 223 60 HOH HOH . F 4 HOH B 24 224 64 HOH HOH . F 4 HOH B 25 225 65 HOH HOH . F 4 HOH B 26 226 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 3.358 27.639 40.143 1 46.62 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . D 3 4.137 28.223 41.186 1 57.99 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . D 3 3.675 28.393 38.86 1 40.85 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . D 3 5.059 28.648 38.644 1 49.48 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #