data_4MH1 # _model_server_result.job_id XYazrY17rHIGD_MU2tQqWQ _model_server_result.datetime_utc '2024-10-20 05:45:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4MH1 # _exptl.entry_id 4MH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PYRROLOQUINOLINE QUINONE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MH1 _cell.length_a 201.53 _cell.length_b 201.53 _cell.length_c 201.53 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 14_554 -y,-x,-z-1 0 -1 0 -1 0 0 0 0 -1 0 0 -201.53 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 289 A CYS 284 1_555 A SG CYS 329 A CYS 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 A SG CYS 383 A CYS 378 1_555 A SG CYS 412 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 289 B CYS 284 1_555 B SG CYS 329 B CYS 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 B SG CYS 383 B CYS 378 1_555 B SG CYS 412 B CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc1 C O7A PQQ . B PQQ 601 1_555 D CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc2 C O5 PQQ . B PQQ 601 1_555 D CA CA . B CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? # _chem_comp.formula 'C14 H6 N2 O8' _chem_comp.formula_weight 330.206 _chem_comp.id PQQ _chem_comp.mon_nstd_flag . _chem_comp.name 'PYRROLOQUINOLINE QUINONE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PQQ sing 258 n y N1 C1A PQQ sing 259 n y N1 HN1 PQQ sing 260 n n C2 C2X PQQ sing 261 n n C2 C3 PQQ doub 262 n y C2X O2A PQQ doub 263 n n C2X O2B PQQ sing 264 n n O2B HOB2 PQQ sing 265 n n C3 C3A PQQ sing 266 n y C3 H3 PQQ sing 267 n n C3A C1A PQQ doub 268 n y C3A C4 PQQ sing 269 n n C1A C9A PQQ sing 270 n y C4 O4 PQQ doub 271 n n C4 C5 PQQ sing 272 n n C5 O5 PQQ doub 273 n n C5 C6A PQQ sing 274 n n C6A N6 PQQ doub 275 n y C6A C9A PQQ sing 276 n y N6 C7 PQQ sing 277 n y C7 C7X PQQ sing 278 n n C7 C8 PQQ doub 279 n y C7X O7A PQQ doub 280 n n C7X O7B PQQ sing 281 n n O7B HOB7 PQQ sing 282 n n C8 C9 PQQ sing 283 n y C8 H8 PQQ sing 284 n n C9 C9X PQQ sing 285 n n C9 C9A PQQ doub 286 n y C9X O9A PQQ doub 287 n n C9X O9B PQQ sing 288 n n O9B HOB9 PQQ sing 289 n n # _atom_sites.entry_id 4MH1 _atom_sites.fract_transf_matrix[1][1] 0.004962 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PQQ B 1 601 601 PQQ PQQ . D 3 CA B 1 602 602 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PQQ . . . C 2 56.899 -28.215 -93.674 1 75.16 ? N1 PQQ 601 B 1 HETATM 2 C C2 PQQ . . . C 2 56.243 -29.454 -93.273 1 69.69 ? C2 PQQ 601 B 1 HETATM 3 C C2X PQQ . . . C 2 54.936 -29.516 -92.547 1 68.71 ? C2X PQQ 601 B 1 HETATM 4 O O2A PQQ . . . C 2 54.09 -28.586 -92.725 1 62.91 ? O2A PQQ 601 B 1 HETATM 5 O O2B PQQ . . . C 2 54.674 -30.501 -91.79 1 63.81 ? O2B PQQ 601 B 1 HETATM 6 C C3 PQQ . . . C 2 56.716 -30.482 -94.198 1 64.88 ? C3 PQQ 601 B 1 HETATM 7 C C3A PQQ . . . C 2 57.138 -29.743 -95.398 1 76.22 ? C3A PQQ 601 B 1 HETATM 8 C C1A PQQ . . . C 2 56.914 -28.294 -95.145 1 75.1 ? C1A PQQ 601 B 1 HETATM 9 C C4 PQQ . . . C 2 58.446 -30.023 -96.217 1 84.72 ? C4 PQQ 601 B 1 HETATM 10 O O4 PQQ . . . C 2 59.263 -30.862 -95.854 1 81.28 ? O4 PQQ 601 B 1 HETATM 11 C C5 PQQ . . . C 2 58.589 -29.23 -97.412 1 84.68 ? C5 PQQ 601 B 1 HETATM 12 O O5 PQQ . . . C 2 58.919 -29.723 -98.483 1 82.71 ? O5 PQQ 601 B 1 HETATM 13 C C6A PQQ . . . C 2 58.279 -27.77 -97.315 1 83.49 ? C6A PQQ 601 B 1 HETATM 14 N N6 PQQ . . . C 2 58.769 -26.959 -98.263 1 86.25 ? N6 PQQ 601 B 1 HETATM 15 C C7 PQQ . . . C 2 58.55 -25.643 -98.252 1 83.73 ? C7 PQQ 601 B 1 HETATM 16 C C7X PQQ . . . C 2 59.136 -24.806 -99.342 1 86.61 ? C7X PQQ 601 B 1 HETATM 17 O O7A PQQ . . . C 2 60.148 -25.223 -99.978 1 85.73 ? O7A PQQ 601 B 1 HETATM 18 O O7B PQQ . . . C 2 58.612 -23.691 -99.615 1 86.38 ? O7B PQQ 601 B 1 HETATM 19 C C8 PQQ . . . C 2 57.779 -25.068 -97.246 1 76.09 ? C8 PQQ 601 B 1 HETATM 20 C C9 PQQ . . . C 2 57.234 -25.866 -96.232 1 79.46 ? C9 PQQ 601 B 1 HETATM 21 C C9X PQQ . . . C 2 56.412 -25.134 -95.213 1 76.51 ? C9X PQQ 601 B 1 HETATM 22 O O9A PQQ . . . C 2 55.62 -25.71 -94.414 1 77.73 ? O9A PQQ 601 B 1 HETATM 23 O O9B PQQ . . . C 2 56.493 -23.883 -95.183 1 75.58 ? O9B PQQ 601 B 1 HETATM 24 C C9A PQQ . . . C 2 57.477 -27.263 -96.248 1 81.81 ? C9A PQQ 601 B 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 460 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 24 #