data_4MH7 # _model_server_result.job_id Gedm3yrgtiIISRTBmFHJAw _model_server_result.datetime_utc '2024-11-28 19:32:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mh7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":906}' # _entry.id 4MH7 # _exptl.entry_id 4MH7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.524 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-butyl-2-(butylamino)-4-[(trans-4-hydroxycyclohexyl)amino]-N-methylpyrimidine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.98 _cell.angle_gamma 90 _cell.entry_id 4MH7 _cell.length_a 50.874 _cell.length_b 90.864 _cell.length_c 69.587 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MH7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,N 1 1 B,I,J,K,L,M,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 177 A ASN 728 1_555 G MG MG . A MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc2 A OD2 ASP 190 A ASP 741 1_555 G MG MG . A MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 A OE1 GLU 272 A GLU 823 1_555 M MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.831 ? metalc ? metalc4 A OE2 GLU 272 A GLU 823 1_555 M MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc5 B O SER 135 B SER 686 1_555 M MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc6 B O LEU 137 B LEU 688 1_555 M MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc7 B O PRO 141 B PRO 692 1_555 M MG MG . B MG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? # _chem_comp.formula 'C20 H35 N5 O2' _chem_comp.formula_weight 377.524 _chem_comp.id MH7 _chem_comp.mon_nstd_flag . _chem_comp.name N-butyl-2-(butylamino)-4-[(trans-4-hydroxycyclohexyl)amino]-N-methylpyrimidine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 MH7 sing 237 n n C16 C15 MH7 sing 238 n n C14 C15 MH7 sing 239 n n C14 N12 MH7 sing 240 n n N12 C13 MH7 sing 241 n n N12 C10 MH7 sing 242 n n O11 C10 MH7 doub 243 n n C10 C09 MH7 sing 244 n n C26 C25 MH7 sing 245 n n C26 C20 MH7 sing 246 n n C09 C08 MH7 doub 247 n y C09 C18 MH7 sing 248 n y N19 C18 MH7 sing 249 n n N19 C20 MH7 sing 250 n n C08 N07 MH7 sing 251 n y C18 N27 MH7 doub 252 n y C25 C23 MH7 sing 253 n n C20 C21 MH7 sing 254 n n N07 C06 MH7 doub 255 n y N27 C06 MH7 sing 256 n y C23 O24 MH7 sing 257 n n C23 C22 MH7 sing 258 n n C06 N05 MH7 sing 259 n n C21 C22 MH7 sing 260 n n N05 C04 MH7 sing 261 n n C04 C03 MH7 sing 262 n n C03 C02 MH7 sing 263 n n C01 C02 MH7 sing 264 n n C01 H012 MH7 sing 265 n n C01 H011 MH7 sing 266 n n C01 H013 MH7 sing 267 n n C02 H021 MH7 sing 268 n n C02 H022 MH7 sing 269 n n C03 H031 MH7 sing 270 n n C03 H032 MH7 sing 271 n n C04 H041 MH7 sing 272 n n C04 H042 MH7 sing 273 n n N05 H051 MH7 sing 274 n n C08 H081 MH7 sing 275 n n C13 H133 MH7 sing 276 n n C13 H131 MH7 sing 277 n n C13 H132 MH7 sing 278 n n C14 H141 MH7 sing 279 n n C14 H142 MH7 sing 280 n n C15 H152 MH7 sing 281 n n C15 H151 MH7 sing 282 n n C16 H162 MH7 sing 283 n n C16 H161 MH7 sing 284 n n C17 H172 MH7 sing 285 n n C17 H173 MH7 sing 286 n n C17 H171 MH7 sing 287 n n N19 H191 MH7 sing 288 n n C20 H201 MH7 sing 289 n n C21 H212 MH7 sing 290 n n C21 H211 MH7 sing 291 n n C22 H221 MH7 sing 292 n n C22 H222 MH7 sing 293 n n C23 H231 MH7 sing 294 n n O24 H241 MH7 sing 295 n n C25 H251 MH7 sing 296 n n C25 H252 MH7 sing 297 n n C26 H261 MH7 sing 298 n n C26 H262 MH7 sing 299 n n # _atom_sites.entry_id 4MH7 _atom_sites.fract_transf_matrix[1][1] 0.019656 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00346 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 901 2 CL CL . D 2 CL A 1 902 3 CL CL . E 2 CL A 1 903 5 CL CL . F 2 CL A 1 904 8 CL CL . G 3 MG A 1 905 11 MG MG . H 4 MH7 A 1 906 1 MH7 MH7 . I 2 CL B 1 901 1 CL CL . J 2 CL B 1 902 4 CL CL . K 2 CL B 1 903 6 CL CL . L 2 CL B 1 904 7 CL CL . M 3 MG B 1 905 12 MG MG . N 5 HOH A 1 1001 4 HOH HOH . N 5 HOH A 2 1002 6 HOH HOH . N 5 HOH A 3 1003 7 HOH HOH . N 5 HOH A 4 1004 8 HOH HOH . N 5 HOH A 5 1005 11 HOH HOH . N 5 HOH A 6 1006 13 HOH HOH . N 5 HOH A 7 1007 17 HOH HOH . N 5 HOH A 8 1008 18 HOH HOH . N 5 HOH A 9 1009 20 HOH HOH . N 5 HOH A 10 1010 22 HOH HOH . N 5 HOH A 11 1011 24 HOH HOH . N 5 HOH A 12 1012 25 HOH HOH . N 5 HOH A 13 1013 27 HOH HOH . N 5 HOH A 14 1014 34 HOH HOH . O 5 HOH B 1 1001 1 HOH HOH . O 5 HOH B 2 1002 2 HOH HOH . O 5 HOH B 3 1003 3 HOH HOH . O 5 HOH B 4 1004 5 HOH HOH . O 5 HOH B 5 1005 9 HOH HOH . O 5 HOH B 6 1006 10 HOH HOH . O 5 HOH B 7 1007 12 HOH HOH . O 5 HOH B 8 1008 14 HOH HOH . O 5 HOH B 9 1009 15 HOH HOH . O 5 HOH B 10 1010 21 HOH HOH . O 5 HOH B 11 1011 26 HOH HOH . O 5 HOH B 12 1012 31 HOH HOH . O 5 HOH B 13 1013 32 HOH HOH . O 5 HOH B 14 1014 35 HOH HOH . O 5 HOH B 15 1015 37 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 MH7 . . . H 4 12.946 16.633 20.215 1 37.55 ? C01 MH7 906 A 1 HETATM 2 C C02 MH7 . . . H 4 13.114 18.128 20.304 1 32.61 ? C02 MH7 906 A 1 HETATM 3 C C03 MH7 . . . H 4 13.062 18.806 18.931 1 30.52 ? C03 MH7 906 A 1 HETATM 4 C C04 MH7 . . . H 4 14.278 19.749 18.716 1 33.21 ? C04 MH7 906 A 1 HETATM 5 N N05 MH7 . . . H 4 14.225 20.333 17.386 1 29.66 ? N05 MH7 906 A 1 HETATM 6 C C06 MH7 . . . H 4 14.914 19.665 16.299 1 28.42 ? C06 MH7 906 A 1 HETATM 7 N N07 MH7 . . . H 4 16.014 20.219 15.749 1 28.84 ? N07 MH7 906 A 1 HETATM 8 C C08 MH7 . . . H 4 16.672 19.6 14.74 1 28.84 ? C08 MH7 906 A 1 HETATM 9 C C09 MH7 . . . H 4 16.226 18.357 14.238 1 30.6 ? C09 MH7 906 A 1 HETATM 10 C C10 MH7 . . . H 4 16.854 17.526 13.1 1 34.17 ? C10 MH7 906 A 1 HETATM 11 O O11 MH7 . . . H 4 16.261 16.489 12.883 1 35.95 ? O11 MH7 906 A 1 HETATM 12 N N12 MH7 . . . H 4 18.03 17.787 12.259 1 34.31 ? N12 MH7 906 A 1 HETATM 13 C C13 MH7 . . . H 4 18.905 18.947 12.316 1 35.24 ? C13 MH7 906 A 1 HETATM 14 C C14 MH7 . . . H 4 18.456 16.811 11.233 1 33.82 ? C14 MH7 906 A 1 HETATM 15 C C15 MH7 . . . H 4 19.76 16.145 11.779 1 34.55 ? C15 MH7 906 A 1 HETATM 16 C C16 MH7 . . . H 4 20.972 16.316 10.886 1 39.88 ? C16 MH7 906 A 1 HETATM 17 C C17 MH7 . . . H 4 22.249 15.745 11.544 1 37.53 ? C17 MH7 906 A 1 HETATM 18 C C18 MH7 . . . H 4 15.065 17.816 14.856 1 30.92 ? C18 MH7 906 A 1 HETATM 19 N N19 MH7 . . . H 4 14.477 16.532 14.453 1 31.41 ? N19 MH7 906 A 1 HETATM 20 C C20 MH7 . . . H 4 13.333 16.045 15.156 1 30.5 ? C20 MH7 906 A 1 HETATM 21 C C21 MH7 . . . H 4 13.825 15.257 16.374 1 32.49 ? C21 MH7 906 A 1 HETATM 22 C C22 MH7 . . . H 4 12.666 14.635 17.13 1 32.61 ? C22 MH7 906 A 1 HETATM 23 C C23 MH7 . . . H 4 11.781 13.806 16.236 1 33.93 ? C23 MH7 906 A 1 HETATM 24 O O24 MH7 . . . H 4 10.619 13.441 16.959 1 38.1 ? O24 MH7 906 A 1 HETATM 25 C C25 MH7 . . . H 4 11.345 14.557 14.969 1 34.63 ? C25 MH7 906 A 1 HETATM 26 C C26 MH7 . . . H 4 12.512 15.186 14.232 1 33.06 ? C26 MH7 906 A 1 HETATM 27 N N27 MH7 . . . H 4 14.451 18.484 15.856 1 30.16 ? N27 MH7 906 A 1 HETATM 28 H H012 MH7 . . . H 4 13.653 16.259 19.655 1 45.06 ? H012 MH7 906 A 1 HETATM 29 H H011 MH7 . . . H 4 12.078 16.427 19.822 1 45.06 ? H011 MH7 906 A 1 HETATM 30 H H013 MH7 . . . H 4 12.999 16.241 21.118 1 45.06 ? H013 MH7 906 A 1 HETATM 31 H H021 MH7 . . . H 4 13.966 18.329 20.724 1 39.13 ? H021 MH7 906 A 1 HETATM 32 H H022 MH7 . . . H 4 12.394 18.489 20.858 1 39.13 ? H022 MH7 906 A 1 HETATM 33 H H031 MH7 . . . H 4 13.056 18.111 18.229 1 36.63 ? H031 MH7 906 A 1 HETATM 34 H H032 MH7 . . . H 4 12.238 19.335 18.864 1 36.63 ? H032 MH7 906 A 1 HETATM 35 H H041 MH7 . . . H 4 15.111 19.245 18.834 1 39.85 ? H041 MH7 906 A 1 HETATM 36 H H042 MH7 . . . H 4 14.24 20.481 19.381 1 39.85 ? H042 MH7 906 A 1 HETATM 37 H H051 MH7 . . . H 4 13.76 21.092 17.237 1 35.59 ? H051 MH7 906 A 1 HETATM 38 H H081 MH7 . . . H 4 17.456 20.019 14.351 1 34.61 ? H081 MH7 906 A 1 HETATM 39 H H133 MH7 . . . H 4 19.102 19.257 11.4 1 42.29 ? H133 MH7 906 A 1 HETATM 40 H H131 MH7 . . . H 4 19.741 18.704 12.765 1 42.29 ? H131 MH7 906 A 1 HETATM 41 H H132 MH7 . . . H 4 18.461 19.668 12.817 1 42.29 ? H132 MH7 906 A 1 HETATM 42 H H141 MH7 . . . H 4 18.605 17.253 10.366 1 40.58 ? H141 MH7 906 A 1 HETATM 43 H H142 MH7 . . . H 4 17.768 16.113 11.142 1 40.58 ? H142 MH7 906 A 1 HETATM 44 H H152 MH7 . . . H 4 19.593 15.197 11.903 1 41.46 ? H152 MH7 906 A 1 HETATM 45 H H151 MH7 . . . H 4 19.958 16.533 12.654 1 41.46 ? H151 MH7 906 A 1 HETATM 46 H H162 MH7 . . . H 4 20.812 15.852 10.033 1 47.86 ? H162 MH7 906 A 1 HETATM 47 H H161 MH7 . . . H 4 21.105 17.265 10.712 1 47.86 ? H161 MH7 906 A 1 HETATM 48 H H172 MH7 . . . H 4 23.008 15.823 10.915 1 45.04 ? H172 MH7 906 A 1 HETATM 49 H H173 MH7 . . . H 4 22.106 14.793 11.771 1 45.04 ? H173 MH7 906 A 1 HETATM 50 H H171 MH7 . . . H 4 22.448 16.246 12.356 1 45.04 ? H171 MH7 906 A 1 HETATM 51 H H191 MH7 . . . H 4 14.838 16.05 13.76 1 37.7 ? H191 MH7 906 A 1 HETATM 52 H H201 MH7 . . . H 4 12.795 16.799 15.458 1 36.6 ? H201 MH7 906 A 1 HETATM 53 H H212 MH7 . . . H 4 14.434 14.545 16.073 1 38.99 ? H212 MH7 906 A 1 HETATM 54 H H211 MH7 . . . H 4 14.312 15.864 16.973 1 38.99 ? H211 MH7 906 A 1 HETATM 55 H H221 MH7 . . . H 4 12.129 15.356 17.543 1 39.13 ? H221 MH7 906 A 1 HETATM 56 H H222 MH7 . . . H 4 13.025 14.066 17.848 1 39.13 ? H222 MH7 906 A 1 HETATM 57 H H231 MH7 . . . H 4 12.261 12.997 15.977 1 40.71 ? H231 MH7 906 A 1 HETATM 58 H H241 MH7 . . . H 4 10.517 12.564 16.93 1 45.72 ? H241 MH7 906 A 1 HETATM 59 H H251 MH7 . . . H 4 10.89 13.932 14.365 1 41.55 ? H251 MH7 906 A 1 HETATM 60 H H252 MH7 . . . H 4 10.708 15.268 15.216 1 41.55 ? H252 MH7 906 A 1 HETATM 61 H H261 MH7 . . . H 4 12.133 15.781 13.547 1 39.67 ? H261 MH7 906 A 1 HETATM 62 H H262 MH7 . . . H 4 13.092 14.451 13.928 1 39.67 ? H262 MH7 906 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 62 #