data_4MHW # _model_server_result.job_id ddh2S3RxyYmH9Xk2r75yDQ _model_server_result.datetime_utc '2024-11-26 23:11:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mhw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":201}' # _entry.id 4MHW # _exptl.entry_id 4MHW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 263.359 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophen-2-yl}ethanol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.58 _cell.angle_gamma 90 _cell.entry_id 4MHW _cell.length_a 63.73 _cell.length_b 84.09 _cell.length_c 128.81 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MHW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,MA 1 1 B,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,NA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 S N N # _chem_comp.formula 'C13 H17 N3 O S' _chem_comp.formula_weight 263.359 _chem_comp.id 0YN _chem_comp.mon_nstd_flag . _chem_comp.name 2-{4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophen-2-yl}ethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5G C5B 0YN sing 1 n n C5B C5A 0YN sing 2 n n C5A C5 0YN sing 3 n n C5 C4 0YN doub 4 n y C5 S1 0YN sing 5 n y C4A C4 0YN sing 6 n n C4 C3 0YN sing 7 n y S1 C2 0YN sing 8 n y C3 C2 0YN doub 9 n y C3 C35 0YN sing 10 n n C35 C5' 0YN sing 11 n n C5' C6' 0YN doub 12 n y C5' C4' 0YN sing 13 n y C6' N1' 0YN sing 14 n y N4' C4' 0YN sing 15 n n C4' N3' 0YN doub 16 n y N1' C2' 0YN doub 17 n y N3' C2' 0YN sing 18 n y C2' C2A 0YN sing 19 n n C2A H1 0YN sing 20 n n C2A H2 0YN sing 21 n n C2A H3 0YN sing 22 n n C35 H4 0YN sing 23 n n C35 H5 0YN sing 24 n n C2 H6 0YN sing 25 n n C4A H7 0YN sing 26 n n C4A H8 0YN sing 27 n n C4A H9 0YN sing 28 n n C5A H10 0YN sing 29 n n C5A H11 0YN sing 30 n n C5B H12 0YN sing 31 n n C5B H13 0YN sing 32 n n O5G H14 0YN sing 33 n n N4' H15 0YN sing 34 n n N4' H16 0YN sing 35 n n C6' H17 0YN sing 36 n n # _atom_sites.entry_id 4MHW _atom_sites.fract_transf_matrix[1][1] 0.015691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001258 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0YN A 1 201 2 0YN LIG . D 3 BNG A 1 202 3 BNG BNG . E 4 P6G A 1 203 1 P6G P6G . F 4 P6G A 1 204 2 P6G P6G . G 5 1PE A 1 205 2 1PE 1PE . H 6 PEG A 1 206 1 PEG PEG . I 6 PEG A 1 207 4 PEG PEG . J 6 PEG A 1 208 8 PEG PEG . K 6 PEG A 1 209 12 PEG PEG . L 6 PEG A 1 210 17 PEG PEG . M 6 PEG A 1 211 18 PEG PEG . N 7 PE4 A 1 212 1 PE4 PE4 . O 8 PG0 A 1 213 3 PG0 PG0 . P 9 PG4 A 1 214 1 PG4 PG4 . Q 9 PG4 A 1 215 2 PG4 PG4 . R 9 PG4 A 1 216 7 PG4 PG4 . S 2 0YN B 1 201 1 0YN LIG . T 3 BNG B 1 202 1 BNG BNG . U 3 BNG B 1 203 2 BNG BNG . V 5 1PE B 1 204 1 1PE 1PE . W 6 PEG B 1 205 6 PEG PEG . X 6 PEG B 1 206 7 PEG PEG . Y 6 PEG B 1 207 10 PEG PEG . Z 6 PEG B 1 208 11 PEG PEG . AA 6 PEG B 1 209 13 PEG PEG . BA 6 PEG B 1 210 14 PEG PEG . CA 6 PEG B 1 211 15 PEG PEG . DA 6 PEG B 1 212 16 PEG PEG . EA 6 PEG B 1 213 19 PEG PEG . FA 6 PEG B 1 214 20 PEG PEG . GA 8 PG0 B 1 215 2 PG0 PG0 . HA 8 PG0 B 1 216 4 PG0 PG0 . IA 8 PG0 B 1 217 5 PG0 PG0 . JA 8 PG0 B 1 218 6 PG0 PG0 . KA 9 PG4 B 1 219 4 PG4 PG4 . LA 9 PG4 B 1 220 6 PG4 PG4 . MA 10 HOH A 1 301 1 HOH HOH . MA 10 HOH A 2 302 2 HOH HOH . MA 10 HOH A 3 303 4 HOH HOH . MA 10 HOH A 4 304 5 HOH HOH . MA 10 HOH A 5 305 8 HOH HOH . MA 10 HOH A 6 306 10 HOH HOH . MA 10 HOH A 7 307 13 HOH HOH . MA 10 HOH A 8 308 15 HOH HOH . MA 10 HOH A 9 309 16 HOH HOH . MA 10 HOH A 10 310 18 HOH HOH . MA 10 HOH A 11 311 20 HOH HOH . MA 10 HOH A 12 312 22 HOH HOH . MA 10 HOH A 13 313 23 HOH HOH . MA 10 HOH A 14 314 26 HOH HOH . MA 10 HOH A 15 315 28 HOH HOH . MA 10 HOH A 16 316 32 HOH HOH . MA 10 HOH A 17 317 41 HOH HOH . MA 10 HOH A 18 318 44 HOH HOH . MA 10 HOH A 19 319 45 HOH HOH . MA 10 HOH A 20 320 46 HOH HOH . MA 10 HOH A 21 321 47 HOH HOH . MA 10 HOH A 22 322 52 HOH HOH . MA 10 HOH A 23 323 53 HOH HOH . MA 10 HOH A 24 324 54 HOH HOH . MA 10 HOH A 25 325 55 HOH HOH . MA 10 HOH A 26 326 56 HOH HOH . MA 10 HOH A 27 327 62 HOH HOH . MA 10 HOH A 28 328 63 HOH HOH . MA 10 HOH A 29 329 65 HOH HOH . NA 10 HOH B 1 301 3 HOH HOH . NA 10 HOH B 2 302 6 HOH HOH . NA 10 HOH B 3 303 7 HOH HOH . NA 10 HOH B 4 304 9 HOH HOH . NA 10 HOH B 5 305 11 HOH HOH . NA 10 HOH B 6 306 12 HOH HOH . NA 10 HOH B 7 307 14 HOH HOH . NA 10 HOH B 8 308 17 HOH HOH . NA 10 HOH B 9 309 19 HOH HOH . NA 10 HOH B 10 310 21 HOH HOH . NA 10 HOH B 11 311 24 HOH HOH . NA 10 HOH B 12 312 29 HOH HOH . NA 10 HOH B 13 313 30 HOH HOH . NA 10 HOH B 14 314 31 HOH HOH . NA 10 HOH B 15 315 33 HOH HOH . NA 10 HOH B 16 316 37 HOH HOH . NA 10 HOH B 17 317 39 HOH HOH . NA 10 HOH B 18 318 40 HOH HOH . NA 10 HOH B 19 319 50 HOH HOH . NA 10 HOH B 20 320 59 HOH HOH . NA 10 HOH B 21 321 61 HOH HOH . NA 10 HOH B 22 322 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2A 0YN . . . S 2 19.476 -0.393 22.023 1 43.18 ? C2A 0YN 201 B 1 HETATM 2 C C35 0YN . . . S 2 22.122 1.536 17.268 1 42.67 ? C35 0YN 201 B 1 HETATM 3 C C2 0YN . . . S 2 23.659 3.011 18.857 1 72.87 ? C2 0YN 201 B 1 HETATM 4 S S1 0YN . . . S 2 24.87 4.18 18.602 1 49.39 ? S1 0YN 201 B 1 HETATM 5 C C5 0YN . . . S 2 24.87 4.161 16.896 1 53.76 ? C5 0YN 201 B 1 HETATM 6 C C4 0YN . . . S 2 23.908 3.232 16.482 1 53.98 ? C4 0YN 201 B 1 HETATM 7 C C4A 0YN . . . S 2 23.655 2.962 15.015 1 48.33 ? C4A 0YN 201 B 1 HETATM 8 C C5A 0YN . . . S 2 25.681 4.934 15.87 1 54.74 ? C5A 0YN 201 B 1 HETATM 9 C C5B 0YN . . . S 2 27.14 5.065 16.193 1 64.61 ? C5B 0YN 201 B 1 HETATM 10 O O5G 0YN . . . S 2 27.815 4.438 15.141 1 77.23 ? O5G 0YN 201 B 1 HETATM 11 N N1' 0YN . . . S 2 20.952 -0.651 20.075 1 52.31 ? N1' 0YN 201 B 1 HETATM 12 C C2' 0YN . . . S 2 20.15 0.149 20.763 1 62.06 ? C2' 0YN 201 B 1 HETATM 13 N N3' 0YN . . . S 2 19.94 1.413 20.375 1 57.61 ? N3' 0YN 201 B 1 HETATM 14 C C4' 0YN . . . S 2 20.531 1.921 19.281 1 49.39 ? C4' 0YN 201 B 1 HETATM 15 N N4' 0YN . . . S 2 20.27 3.263 18.917 1 50.05 ? N4' 0YN 201 B 1 HETATM 16 C C5' 0YN . . . S 2 21.396 1.079 18.522 1 48.34 ? C5' 0YN 201 B 1 HETATM 17 C C6' 0YN . . . S 2 21.589 -0.235 18.965 1 39.14 ? C6' 0YN 201 B 1 HETATM 18 C C3 0YN . . . S 2 23.212 2.575 17.57 1 59.82 ? C3 0YN 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #