data_4MIC # _model_server_result.job_id xEngV_iSFL1u4tfVVwlgVA _model_server_result.datetime_utc '2024-10-13 19:15:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 4MIC # _exptl.entry_id 4MIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.394 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description N-{(2E)-3-[4-(propan-2-yl)phenyl]prop-2-enoyl}-beta-D-glucopyranosylamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MIC _cell.length_a 128.74 _cell.length_b 128.74 _cell.length_c 116.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 116.71 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MET 668 A MET 679 1_555 A N LLP 669 A LLP 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C LLP 669 A LLP 680 1_555 A N PHE 670 A PHE 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C18 H25 N O6' _chem_comp.formula_weight 351.394 _chem_comp.id 26Y _chem_comp.mon_nstd_flag . _chem_comp.name N-{(2E)-3-[4-(propan-2-yl)phenyl]prop-2-enoyl}-beta-D-glucopyranosylamine _chem_comp.type saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3' C3' 26Y sing 1 n n O4' C4' 26Y sing 2 n n C3' C4' 26Y sing 3 n n C3' C2' 26Y sing 4 n n C4' C5' 26Y sing 5 n n O2' C2' 26Y sing 6 n n C2' C1' 26Y sing 7 n n O6' C6' 26Y sing 8 n n C5' C6' 26Y sing 9 n n C5' O5' 26Y sing 10 n n C1' O5' 26Y sing 11 n n C1' N1 26Y sing 12 n n N1 C2 26Y sing 13 n n C2 O3 26Y doub 14 n n C2 C4 26Y sing 15 n n C4 C6 26Y doub 16 e n C8 C9 26Y doub 17 n y C8 C7 26Y sing 18 n y C6 C7 26Y sing 19 n n C9 C10 26Y sing 20 n y C7 C12 26Y doub 21 n y C10 C13 26Y sing 22 n n C10 C11 26Y doub 23 n y C12 C11 26Y sing 24 n y C13 C14 26Y sing 25 n n C13 C15 26Y sing 26 n n C14 H1 26Y sing 27 n n C14 H2 26Y sing 28 n n C14 H3 26Y sing 29 n n C13 H4 26Y sing 30 n n C15 H5 26Y sing 31 n n C15 H6 26Y sing 32 n n C15 H7 26Y sing 33 n n C9 H8 26Y sing 34 n n C8 H9 26Y sing 35 n n C11 H10 26Y sing 36 n n C12 H11 26Y sing 37 n n C6 H12 26Y sing 38 n n C4 H13 26Y sing 39 n n N1 H14 26Y sing 40 n n C1' H15 26Y sing 41 n n C5' H16 26Y sing 42 n n C6' H17 26Y sing 43 n n C6' H18 26Y sing 44 n n O6' H19 26Y sing 45 n n C4' H20 26Y sing 46 n n O4' H21 26Y sing 47 n n C3' H22 26Y sing 48 n n O3' H23 26Y sing 49 n n C2' H24 26Y sing 50 n n O2' H25 26Y sing 51 n n # _atom_sites.entry_id 4MIC _atom_sites.fract_transf_matrix[1][1] 0.007768 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 26Y A 1 901 1 26Y 26R . C 3 HOH A 1 1001 1 HOH HOH . C 3 HOH A 2 1002 2 HOH HOH . C 3 HOH A 3 1003 3 HOH HOH . C 3 HOH A 4 1004 4 HOH HOH . C 3 HOH A 5 1005 5 HOH HOH . C 3 HOH A 6 1006 6 HOH HOH . C 3 HOH A 7 1007 7 HOH HOH . C 3 HOH A 8 1008 8 HOH HOH . C 3 HOH A 9 1009 9 HOH HOH . C 3 HOH A 10 1010 10 HOH HOH . C 3 HOH A 11 1011 11 HOH HOH . C 3 HOH A 12 1012 12 HOH HOH . C 3 HOH A 13 1013 13 HOH HOH . C 3 HOH A 14 1014 14 HOH HOH . C 3 HOH A 15 1015 15 HOH HOH . C 3 HOH A 16 1016 16 HOH HOH . C 3 HOH A 17 1017 17 HOH HOH . C 3 HOH A 18 1018 18 HOH HOH . C 3 HOH A 19 1019 19 HOH HOH . C 3 HOH A 20 1020 20 HOH HOH . C 3 HOH A 21 1021 21 HOH HOH . C 3 HOH A 22 1022 22 HOH HOH . C 3 HOH A 23 1023 23 HOH HOH . C 3 HOH A 24 1024 24 HOH HOH . C 3 HOH A 25 1025 25 HOH HOH . C 3 HOH A 26 1026 26 HOH HOH . C 3 HOH A 27 1027 27 HOH HOH . C 3 HOH A 28 1028 28 HOH HOH . C 3 HOH A 29 1029 29 HOH HOH . C 3 HOH A 30 1030 30 HOH HOH . C 3 HOH A 31 1031 31 HOH HOH . C 3 HOH A 32 1032 32 HOH HOH . C 3 HOH A 33 1033 33 HOH HOH . C 3 HOH A 34 1034 34 HOH HOH . C 3 HOH A 35 1035 35 HOH HOH . C 3 HOH A 36 1036 36 HOH HOH . C 3 HOH A 37 1037 37 HOH HOH . C 3 HOH A 38 1038 38 HOH HOH . C 3 HOH A 39 1039 39 HOH HOH . C 3 HOH A 40 1040 40 HOH HOH . C 3 HOH A 41 1041 41 HOH HOH . C 3 HOH A 42 1042 42 HOH HOH . C 3 HOH A 43 1043 43 HOH HOH . C 3 HOH A 44 1044 44 HOH HOH . C 3 HOH A 45 1045 45 HOH HOH . C 3 HOH A 46 1046 46 HOH HOH . C 3 HOH A 47 1047 47 HOH HOH . C 3 HOH A 48 1048 48 HOH HOH . C 3 HOH A 49 1049 49 HOH HOH . C 3 HOH A 50 1050 50 HOH HOH . C 3 HOH A 51 1051 51 HOH HOH . C 3 HOH A 52 1052 52 HOH HOH . C 3 HOH A 53 1053 53 HOH HOH . C 3 HOH A 54 1054 54 HOH HOH . C 3 HOH A 55 1055 55 HOH HOH . C 3 HOH A 56 1056 56 HOH HOH . C 3 HOH A 57 1057 57 HOH HOH . C 3 HOH A 58 1058 58 HOH HOH . C 3 HOH A 59 1059 59 HOH HOH . C 3 HOH A 60 1060 60 HOH HOH . C 3 HOH A 61 1061 61 HOH HOH . C 3 HOH A 62 1062 62 HOH HOH . C 3 HOH A 63 1063 63 HOH HOH . C 3 HOH A 64 1064 64 HOH HOH . C 3 HOH A 65 1065 65 HOH HOH . C 3 HOH A 66 1066 66 HOH HOH . C 3 HOH A 67 1067 67 HOH HOH . C 3 HOH A 68 1068 68 HOH HOH . C 3 HOH A 69 1069 69 HOH HOH . C 3 HOH A 70 1070 70 HOH HOH . C 3 HOH A 71 1071 71 HOH HOH . C 3 HOH A 72 1072 72 HOH HOH . C 3 HOH A 73 1073 73 HOH HOH . C 3 HOH A 74 1074 74 HOH HOH . C 3 HOH A 75 1075 75 HOH HOH . C 3 HOH A 76 1076 76 HOH HOH . C 3 HOH A 77 1077 77 HOH HOH . C 3 HOH A 78 1078 78 HOH HOH . C 3 HOH A 79 1079 79 HOH HOH . C 3 HOH A 80 1080 80 HOH HOH . C 3 HOH A 81 1081 81 HOH HOH . C 3 HOH A 82 1082 82 HOH HOH . C 3 HOH A 83 1083 83 HOH HOH . C 3 HOH A 84 1084 84 HOH HOH . C 3 HOH A 85 1085 85 HOH HOH . C 3 HOH A 86 1086 86 HOH HOH . C 3 HOH A 87 1087 87 HOH HOH . C 3 HOH A 88 1088 88 HOH HOH . C 3 HOH A 89 1089 89 HOH HOH . C 3 HOH A 90 1090 90 HOH HOH . C 3 HOH A 91 1091 91 HOH HOH . C 3 HOH A 92 1092 92 HOH HOH . C 3 HOH A 93 1093 93 HOH HOH . C 3 HOH A 94 1094 94 HOH HOH . C 3 HOH A 95 1095 95 HOH HOH . C 3 HOH A 96 1096 96 HOH HOH . C 3 HOH A 97 1097 97 HOH HOH . C 3 HOH A 98 1098 98 HOH HOH . C 3 HOH A 99 1099 99 HOH HOH . C 3 HOH A 100 1100 100 HOH HOH . C 3 HOH A 101 1101 101 HOH HOH . C 3 HOH A 102 1102 102 HOH HOH . C 3 HOH A 103 1103 103 HOH HOH . C 3 HOH A 104 1104 104 HOH HOH . C 3 HOH A 105 1105 105 HOH HOH . C 3 HOH A 106 1106 106 HOH HOH . C 3 HOH A 107 1107 107 HOH HOH . C 3 HOH A 108 1108 108 HOH HOH . C 3 HOH A 109 1109 109 HOH HOH . C 3 HOH A 110 1110 110 HOH HOH . C 3 HOH A 111 1111 111 HOH HOH . C 3 HOH A 112 1112 112 HOH HOH . C 3 HOH A 113 1113 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 26Y . . . B 2 39.553 28.848 34.769 1 33.13 ? C14 26Y 901 A 1 HETATM 2 C C13 26Y . . . B 2 39.759 27.328 34.691 1 33.18 ? C13 26Y 901 A 1 HETATM 3 C C15 26Y . . . B 2 40.074 26.759 36.074 1 33.32 ? C15 26Y 901 A 1 HETATM 4 C C10 26Y . . . B 2 38.618 26.755 34.11 1 32.76 ? C10 26Y 901 A 1 HETATM 5 C C9 26Y . . . B 2 38.645 26.556 32.733 1 32.3 ? C9 26Y 901 A 1 HETATM 6 C C8 26Y . . . B 2 37.555 26.009 32.076 1 31.93 ? C8 26Y 901 A 1 HETATM 7 C C11 26Y . . . B 2 37.466 26.409 34.83 1 31.71 ? C11 26Y 901 A 1 HETATM 8 C C12 26Y . . . B 2 36.372 25.858 34.16 1 31.48 ? C12 26Y 901 A 1 HETATM 9 C C7 26Y . . . B 2 36.41 25.645 32.779 1 30.3 ? C7 26Y 901 A 1 HETATM 10 C C6 26Y . . . B 2 35.308 25.106 32.113 1 28.55 ? C6 26Y 901 A 1 HETATM 11 C C4 26Y . . . B 2 35.45 24.454 30.724 1 27.4 ? C4 26Y 901 A 1 HETATM 12 C C2 26Y . . . B 2 34.233 23.893 29.973 1 26.13 ? C2 26Y 901 A 1 HETATM 13 O O3 26Y . . . B 2 33.094 23.959 30.434 1 25.67 ? O3 26Y 901 A 1 HETATM 14 N N1 26Y . . . B 2 34.533 23.338 28.792 1 25.52 ? N1 26Y 901 A 1 HETATM 15 C C1' 26Y . . . B 2 33.507 22.741 27.923 1 24.4 ? C1' 26Y 901 A 1 HETATM 16 O O5' 26Y . . . B 2 33.426 21.311 28.179 1 23.47 ? O5' 26Y 901 A 1 HETATM 17 C C5' 26Y . . . B 2 32.33 20.742 27.446 1 23.01 ? C5' 26Y 901 A 1 HETATM 18 C C6' 26Y . . . B 2 32.227 19.262 27.782 1 22.83 ? C6' 26Y 901 A 1 HETATM 19 O O6' 26Y . . . B 2 33.481 18.66 27.405 1 22.22 ? O6' 26Y 901 A 1 HETATM 20 C C4' 26Y . . . B 2 32.488 20.978 25.91 1 23.09 ? C4' 26Y 901 A 1 HETATM 21 O O4' 26Y . . . B 2 31.286 20.593 25.243 1 23.67 ? O4' 26Y 901 A 1 HETATM 22 C C3' 26Y . . . B 2 32.732 22.458 25.597 1 23.35 ? C3' 26Y 901 A 1 HETATM 23 O O3' 26Y . . . B 2 33.02 22.624 24.201 1 21.93 ? O3' 26Y 901 A 1 HETATM 24 C C2' 26Y . . . B 2 33.883 22.976 26.466 1 23.78 ? C2' 26Y 901 A 1 HETATM 25 O O2' 26Y . . . B 2 34.102 24.377 26.245 1 23.47 ? O2' 26Y 901 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #