data_4MJZ # _model_server_result.job_id mY6PkiT0G0jyxK2pBT179g _model_server_result.datetime_utc '2024-11-05 00:35:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mjz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":403}' # _entry.id 4MJZ # _exptl.entry_id 4MJZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4MJZ _cell.length_a 115.477 _cell.length_b 115.477 _cell.length_c 152.055 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MJZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1,2 B,F,G,H,J 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z+1/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 50.685 3 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 25.3425 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 240 n n C1 C2 PEG sing 241 n n C1 H11 PEG sing 242 n n C1 H12 PEG sing 243 n n O1 HO1 PEG sing 244 n n C2 O2 PEG sing 245 n n C2 H21 PEG sing 246 n n C2 H22 PEG sing 247 n n O2 C3 PEG sing 248 n n C3 C4 PEG sing 249 n n C3 H31 PEG sing 250 n n C3 H32 PEG sing 251 n n C4 O4 PEG sing 252 n n C4 H41 PEG sing 253 n n C4 H42 PEG sing 254 n n O4 HO4 PEG sing 255 n n # _atom_sites.entry_id 4MJZ _atom_sites.fract_transf_matrix[1][1] 0.00866 _atom_sites.fract_transf_matrix[1][2] 0.005 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009999 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 401 2 PEG PEG . D 2 PEG A 1 402 3 PEG PEG . E 3 PGE A 1 403 6 PGE PGE . F 4 NO3 B 1 401 1 NO3 NO3 . G 2 PEG B 1 402 4 PEG PEG . H 2 PEG B 1 403 5 PEG PEG . I 5 HOH A 1 501 8 HOH HOH . I 5 HOH A 2 502 9 HOH HOH . I 5 HOH A 3 503 14 HOH HOH . I 5 HOH A 4 504 15 HOH HOH . I 5 HOH A 5 505 16 HOH HOH . I 5 HOH A 6 506 17 HOH HOH . I 5 HOH A 7 507 18 HOH HOH . I 5 HOH A 8 508 19 HOH HOH . I 5 HOH A 9 509 20 HOH HOH . I 5 HOH A 10 510 21 HOH HOH . I 5 HOH A 11 511 22 HOH HOH . I 5 HOH A 12 512 36 HOH HOH . I 5 HOH A 13 513 37 HOH HOH . I 5 HOH A 14 514 38 HOH HOH . I 5 HOH A 15 515 39 HOH HOH . I 5 HOH A 16 516 40 HOH HOH . I 5 HOH A 17 517 41 HOH HOH . I 5 HOH A 18 518 42 HOH HOH . I 5 HOH A 19 519 43 HOH HOH . I 5 HOH A 20 520 44 HOH HOH . I 5 HOH A 21 521 45 HOH HOH . I 5 HOH A 22 522 46 HOH HOH . I 5 HOH A 23 523 47 HOH HOH . I 5 HOH A 24 524 56 HOH HOH . I 5 HOH A 25 525 57 HOH HOH . I 5 HOH A 26 526 58 HOH HOH . I 5 HOH A 27 527 59 HOH HOH . I 5 HOH A 28 528 60 HOH HOH . I 5 HOH A 29 529 61 HOH HOH . I 5 HOH A 30 530 62 HOH HOH . I 5 HOH A 31 531 63 HOH HOH . I 5 HOH A 32 532 64 HOH HOH . I 5 HOH A 33 533 65 HOH HOH . I 5 HOH A 34 534 66 HOH HOH . I 5 HOH A 35 535 72 HOH HOH . I 5 HOH A 36 536 73 HOH HOH . I 5 HOH A 37 537 74 HOH HOH . I 5 HOH A 38 538 75 HOH HOH . J 5 HOH B 1 501 7 HOH HOH . J 5 HOH B 2 502 10 HOH HOH . J 5 HOH B 3 503 11 HOH HOH . J 5 HOH B 4 504 12 HOH HOH . J 5 HOH B 5 505 13 HOH HOH . J 5 HOH B 6 506 23 HOH HOH . J 5 HOH B 7 507 24 HOH HOH . J 5 HOH B 8 508 25 HOH HOH . J 5 HOH B 9 509 26 HOH HOH . J 5 HOH B 10 510 27 HOH HOH . J 5 HOH B 11 511 28 HOH HOH . J 5 HOH B 12 512 29 HOH HOH . J 5 HOH B 13 513 30 HOH HOH . J 5 HOH B 14 514 31 HOH HOH . J 5 HOH B 15 515 32 HOH HOH . J 5 HOH B 16 516 33 HOH HOH . J 5 HOH B 17 517 34 HOH HOH . J 5 HOH B 18 518 35 HOH HOH . J 5 HOH B 19 519 48 HOH HOH . J 5 HOH B 20 520 49 HOH HOH . J 5 HOH B 21 521 50 HOH HOH . J 5 HOH B 22 522 51 HOH HOH . J 5 HOH B 23 523 52 HOH HOH . J 5 HOH B 24 524 53 HOH HOH . J 5 HOH B 25 525 54 HOH HOH . J 5 HOH B 26 526 55 HOH HOH . J 5 HOH B 27 527 67 HOH HOH . J 5 HOH B 28 528 68 HOH HOH . J 5 HOH B 29 529 69 HOH HOH . J 5 HOH B 30 530 70 HOH HOH . J 5 HOH B 31 531 71 HOH HOH . J 5 HOH B 32 532 76 HOH HOH . J 5 HOH B 33 533 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . H 2 24.012 1.68 3.281 1 68.72 ? C1 PEG 403 B 1 HETATM 2 O O1 PEG . . . H 2 24.373 0.325 3.54 1 63.28 ? O1 PEG 403 B 1 HETATM 3 C C2 PEG . . . H 2 25.22 2.394 2.686 1 75.73 ? C2 PEG 403 B 1 HETATM 4 O O2 PEG . . . H 2 25.163 2.352 1.261 1 80.28 ? O2 PEG 403 B 1 HETATM 5 C C3 PEG . . . H 2 26.207 3.106 0.642 1 77.67 ? C3 PEG 403 B 1 HETATM 6 C C4 PEG . . . H 2 26.841 2.293 -0.487 1 79.03 ? C4 PEG 403 B 1 HETATM 7 O O4 PEG . . . H 2 25.935 2.149 -1.589 1 75.11 ? O4 PEG 403 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #