data_4MK1
#
_model_server_result.job_id            OlPJTBcPoEj3voDhV5btgA 
_model_server_result.datetime_utc      '2024-11-28 00:06:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mk1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    4MK1 
#
_exptl.entry_id    4MK1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MK1 
_cell.length_a            88.932 
_cell.length_b            101.655 
_cell.length_c            66.212 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MK1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1 
A,B,C,D,E,F,G,H,I,J,K 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 78 A HIS 41 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc2 A NE2 HIS 111 A HIS 74 1_555 E MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc3 A OE2 GLU 117 A GLU 80 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc4 A OE1 GLU 117 A GLU 80 1_555 D MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
metalc ? metalc5 A OD2 ASP 145 A ASP 108 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc6 A OD1 ASP 145 A ASP 108 1_555 C MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc7 A OE2 GLU 156 A GLU 119 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc8 A O ILE 157 A ILE 120 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc9 B MN MN . A MN 301 1_555 H O01 27Y . A 27Y 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc10 B MN MN . A MN 301 1_555 H O09 27Y . A 27Y 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc11 C MN MN . A MN 302 1_555 H O09 27Y . A 27Y 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc12 C MN MN . A MN 302 1_555 K O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? 
metalc ? metalc13 C MN MN . A MN 302 1_555 K O HOH . A HOH 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc14 C MN MN . A MN 302 1_555 K O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc15 D MN MN . A MN 303 1_555 I O09 27Y . A 27Y 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc16 D MN MN . A MN 303 1_555 I O01 27Y . A 27Y 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc17 D MN MN . A MN 303 1_555 J O01 27Y . A 27Y 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc18 D MN MN . A MN 303 1_555 J O09 27Y . A 27Y 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc19 D MN MN . A MN 303 1_555 K O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4MK1 
_atom_sites.fract_transf_matrix[1][1]    0.011245 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009837 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015103 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MN A 1 301 301 MN MN . 
C 2 MN A 1 302 302 MN MN . 
D 2 MN A 1 303 303 MN MN . 
E 2 MN A 1 304 1 MN MN . 
F 3 SO4 A 1 305 3 SO4 SO4 . 
G 4 EDO A 1 306 1 EDO EDO . 
H 5 27Y A 1 307 1 27Y 27Y . 
I 5 27Y A 1 308 2 27Y 27Y . 
J 5 27Y A 1 309 3 27Y 27Y . 
K 6 HOH A 1 401 1 HOH HOH . 
K 6 HOH A 2 402 2 HOH HOH . 
K 6 HOH A 3 403 3 HOH HOH . 
K 6 HOH A 4 404 4 HOH HOH . 
K 6 HOH A 5 405 5 HOH HOH . 
K 6 HOH A 6 406 6 HOH HOH . 
K 6 HOH A 7 407 7 HOH HOH . 
K 6 HOH A 8 408 8 HOH HOH . 
K 6 HOH A 9 409 9 HOH HOH . 
K 6 HOH A 10 410 10 HOH HOH . 
K 6 HOH A 11 411 11 HOH HOH . 
K 6 HOH A 12 412 12 HOH HOH . 
K 6 HOH A 13 413 13 HOH HOH . 
K 6 HOH A 14 414 14 HOH HOH . 
K 6 HOH A 15 415 15 HOH HOH . 
K 6 HOH A 16 416 16 HOH HOH . 
K 6 HOH A 17 417 17 HOH HOH . 
K 6 HOH A 18 418 18 HOH HOH . 
K 6 HOH A 19 419 19 HOH HOH . 
K 6 HOH A 20 420 20 HOH HOH . 
K 6 HOH A 21 421 21 HOH HOH . 
K 6 HOH A 22 422 22 HOH HOH . 
K 6 HOH A 23 423 23 HOH HOH . 
K 6 HOH A 24 424 24 HOH HOH . 
K 6 HOH A 25 425 25 HOH HOH . 
K 6 HOH A 26 426 26 HOH HOH . 
K 6 HOH A 27 427 27 HOH HOH . 
K 6 HOH A 28 428 28 HOH HOH . 
K 6 HOH A 29 429 29 HOH HOH . 
K 6 HOH A 30 430 30 HOH HOH . 
K 6 HOH A 31 431 31 HOH HOH . 
K 6 HOH A 32 432 32 HOH HOH . 
K 6 HOH A 33 433 33 HOH HOH . 
K 6 HOH A 34 434 34 HOH HOH . 
K 6 HOH A 35 435 35 HOH HOH . 
K 6 HOH A 36 436 36 HOH HOH . 
K 6 HOH A 37 437 37 HOH HOH . 
K 6 HOH A 38 438 38 HOH HOH . 
K 6 HOH A 39 439 39 HOH HOH . 
K 6 HOH A 40 440 40 HOH HOH . 
K 6 HOH A 41 441 41 HOH HOH . 
K 6 HOH A 42 442 42 HOH HOH . 
K 6 HOH A 43 443 43 HOH HOH . 
K 6 HOH A 44 444 44 HOH HOH . 
K 6 HOH A 45 445 45 HOH HOH . 
K 6 HOH A 46 446 46 HOH HOH . 
K 6 HOH A 47 447 47 HOH HOH . 
K 6 HOH A 48 448 48 HOH HOH . 
K 6 HOH A 49 449 49 HOH HOH . 
K 6 HOH A 50 450 50 HOH HOH . 
K 6 HOH A 51 451 51 HOH HOH . 
K 6 HOH A 52 452 52 HOH HOH . 
K 6 HOH A 53 453 53 HOH HOH . 
K 6 HOH A 54 454 54 HOH HOH . 
K 6 HOH A 55 455 55 HOH HOH . 
K 6 HOH A 56 456 56 HOH HOH . 
K 6 HOH A 57 457 57 HOH HOH . 
K 6 HOH A 58 458 58 HOH HOH . 
K 6 HOH A 59 459 59 HOH HOH . 
K 6 HOH A 60 460 60 HOH HOH . 
K 6 HOH A 61 461 61 HOH HOH . 
K 6 HOH A 62 462 62 HOH HOH . 
K 6 HOH A 63 463 63 HOH HOH . 
K 6 HOH A 64 464 64 HOH HOH . 
K 6 HOH A 65 465 65 HOH HOH . 
K 6 HOH A 66 466 66 HOH HOH . 
K 6 HOH A 67 467 67 HOH HOH . 
K 6 HOH A 68 468 68 HOH HOH . 
K 6 HOH A 69 469 69 HOH HOH . 
K 6 HOH A 70 470 70 HOH HOH . 
K 6 HOH A 71 471 71 HOH HOH . 
K 6 HOH A 72 472 72 HOH HOH . 
K 6 HOH A 73 473 73 HOH HOH . 
K 6 HOH A 74 474 74 HOH HOH . 
K 6 HOH A 75 475 75 HOH HOH . 
K 6 HOH A 76 476 76 HOH HOH . 
K 6 HOH A 77 477 77 HOH HOH . 
K 6 HOH A 78 478 78 HOH HOH . 
K 6 HOH A 79 479 79 HOH HOH . 
K 6 HOH A 80 480 80 HOH HOH . 
K 6 HOH A 81 481 81 HOH HOH . 
K 6 HOH A 82 482 82 HOH HOH . 
K 6 HOH A 83 483 83 HOH HOH . 
K 6 HOH A 84 484 84 HOH HOH . 
K 6 HOH A 85 485 85 HOH HOH . 
K 6 HOH A 86 486 86 HOH HOH . 
K 6 HOH A 87 487 87 HOH HOH . 
K 6 HOH A 88 488 88 HOH HOH . 
K 6 HOH A 89 489 89 HOH HOH . 
K 6 HOH A 90 490 90 HOH HOH . 
K 6 HOH A 91 491 91 HOH HOH . 
K 6 HOH A 92 492 92 HOH HOH . 
K 6 HOH A 93 493 93 HOH HOH . 
K 6 HOH A 94 494 94 HOH HOH . 
K 6 HOH A 95 495 95 HOH HOH . 
K 6 HOH A 96 496 96 HOH HOH . 
K 6 HOH A 97 497 97 HOH HOH . 
K 6 HOH A 98 498 98 HOH HOH . 
K 6 HOH A 99 499 99 HOH HOH . 
K 6 HOH A 100 500 100 HOH HOH . 
K 6 HOH A 101 501 101 HOH HOH . 
K 6 HOH A 102 502 102 HOH HOH . 
K 6 HOH A 103 503 103 HOH HOH . 
K 6 HOH A 104 504 104 HOH HOH . 
K 6 HOH A 105 505 105 HOH HOH . 
K 6 HOH A 106 506 106 HOH HOH . 
K 6 HOH A 107 507 107 HOH HOH . 
K 6 HOH A 108 508 108 HOH HOH . 
K 6 HOH A 109 509 109 HOH HOH . 
K 6 HOH A 110 510 110 HOH HOH . 
K 6 HOH A 111 511 111 HOH HOH . 
K 6 HOH A 112 512 112 HOH HOH . 
K 6 HOH A 113 513 113 HOH HOH . 
K 6 HOH A 114 514 117 HOH HOH . 
K 6 HOH A 115 515 121 HOH HOH . 
K 6 HOH A 116 516 122 HOH HOH . 
K 6 HOH A 117 517 123 HOH HOH . 
K 6 HOH A 118 518 124 HOH HOH . 
K 6 HOH A 119 519 125 HOH HOH . 
K 6 HOH A 120 520 126 HOH HOH . 
K 6 HOH A 121 521 127 HOH HOH . 
K 6 HOH A 122 522 129 HOH HOH . 
K 6 HOH A 123 523 130 HOH HOH . 
K 6 HOH A 124 524 131 HOH HOH . 
K 6 HOH A 125 525 132 HOH HOH . 
K 6 HOH A 126 526 133 HOH HOH . 
K 6 HOH A 127 527 134 HOH HOH . 
K 6 HOH A 128 528 135 HOH HOH . 
K 6 HOH A 129 529 137 HOH HOH . 
K 6 HOH A 130 530 138 HOH HOH . 
K 6 HOH A 131 531 139 HOH HOH . 
K 6 HOH A 132 532 140 HOH HOH . 
K 6 HOH A 133 533 141 HOH HOH . 
K 6 HOH A 134 534 142 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               9.733 
_atom_site.Cartn_y               20.61 
_atom_site.Cartn_z               -6.665 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        26.1 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           301 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#