data_4MKI # _model_server_result.job_id 5FPDntFnYypA_rEv-CuhZw _model_server_result.datetime_utc '2024-12-21 17:20:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mki # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4MKI # _exptl.entry_id 4MKI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MKI _cell.length_a 110.229 _cell.length_b 115.163 _cell.length_c 54.416 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MKI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 181 n n C1B O1B LMT sing 182 n n C1B O5B LMT sing 183 n n C1B H1B LMT sing 184 n n C2B C3B LMT sing 185 n n C2B O2B LMT sing 186 n n C2B H2B LMT sing 187 n n C3B C4B LMT sing 188 n n C3B O3B LMT sing 189 n n C3B H3B LMT sing 190 n n C4B C5B LMT sing 191 n n C4B O4' LMT sing 192 n n C4B H4B LMT sing 193 n n C5B C6B LMT sing 194 n n C5B O5B LMT sing 195 n n C5B H5B LMT sing 196 n n C6B O6B LMT sing 197 n n C6B "H6'2" LMT sing 198 n n C6B "H6'1" LMT sing 199 n n O1B C4' LMT sing 200 n n O2B H2O1 LMT sing 201 n n O3B H3O1 LMT sing 202 n n O4' H4O1 LMT sing 203 n n O6B H6B LMT sing 204 n n C1' C2' LMT sing 205 n n C1' O1' LMT sing 206 n n C1' O5' LMT sing 207 n n C1' H1' LMT sing 208 n n C2' C3' LMT sing 209 n n C2' O2' LMT sing 210 n n C2' H2' LMT sing 211 n n C3' C4' LMT sing 212 n n C3' O3' LMT sing 213 n n C3' H3' LMT sing 214 n n C4' C5' LMT sing 215 n n C4' H4' LMT sing 216 n n C5' C6' LMT sing 217 n n C5' O5' LMT sing 218 n n C5' H5' LMT sing 219 n n C6' O6' LMT sing 220 n n C6' H6D LMT sing 221 n n C6' H6E LMT sing 222 n n O1' C1 LMT sing 223 n n O2' H2O2 LMT sing 224 n n O3' H3O2 LMT sing 225 n n O6' H6' LMT sing 226 n n C1 C2 LMT sing 227 n n C1 H12 LMT sing 228 n n C1 H11 LMT sing 229 n n C2 C3 LMT sing 230 n n C2 H22 LMT sing 231 n n C2 H21 LMT sing 232 n n C3 C4 LMT sing 233 n n C3 H32 LMT sing 234 n n C3 H31 LMT sing 235 n n C4 C5 LMT sing 236 n n C4 H42 LMT sing 237 n n C4 H41 LMT sing 238 n n C5 C6 LMT sing 239 n n C5 H52 LMT sing 240 n n C5 H51 LMT sing 241 n n C6 C7 LMT sing 242 n n C6 H62 LMT sing 243 n n C6 H61 LMT sing 244 n n C7 C8 LMT sing 245 n n C7 H72 LMT sing 246 n n C7 H71 LMT sing 247 n n C8 C9 LMT sing 248 n n C8 H82 LMT sing 249 n n C8 H81 LMT sing 250 n n C9 C10 LMT sing 251 n n C9 H92 LMT sing 252 n n C9 H91 LMT sing 253 n n C10 C11 LMT sing 254 n n C10 H102 LMT sing 255 n n C10 H101 LMT sing 256 n n C11 C12 LMT sing 257 n n C11 H112 LMT sing 258 n n C11 H111 LMT sing 259 n n C12 H123 LMT sing 260 n n C12 H122 LMT sing 261 n n C12 H121 LMT sing 262 n n # _atom_sites.entry_id 4MKI _atom_sites.fract_transf_matrix[1][1] 0.009072 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018377 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 B 1 301 1 SO4 SO4 . D 3 LMT B 1 302 1 LMT LMT . E 2 SO4 A 1 301 2 SO4 SO4 . F 2 SO4 A 1 302 3 SO4 SO4 . G 3 LMT A 1 303 1 LMT LMT . H 4 HOH B 1 401 1 HOH HOH . H 4 HOH B 2 402 3 HOH HOH . H 4 HOH B 3 403 6 HOH HOH . H 4 HOH B 4 404 7 HOH HOH . H 4 HOH B 5 405 8 HOH HOH . H 4 HOH B 6 406 9 HOH HOH . H 4 HOH B 7 407 11 HOH HOH . H 4 HOH B 8 408 13 HOH HOH . H 4 HOH B 9 409 15 HOH HOH . H 4 HOH B 10 410 17 HOH HOH . H 4 HOH B 11 411 18 HOH HOH . H 4 HOH B 12 412 19 HOH HOH . H 4 HOH B 13 413 20 HOH HOH . H 4 HOH B 14 414 21 HOH HOH . H 4 HOH B 15 415 22 HOH HOH . H 4 HOH B 16 416 27 HOH HOH . H 4 HOH B 17 417 29 HOH HOH . H 4 HOH B 18 418 31 HOH HOH . H 4 HOH B 19 419 32 HOH HOH . H 4 HOH B 20 420 33 HOH HOH . H 4 HOH B 21 421 34 HOH HOH . H 4 HOH B 22 422 35 HOH HOH . H 4 HOH B 23 423 36 HOH HOH . H 4 HOH B 24 424 37 HOH HOH . H 4 HOH B 25 425 40 HOH HOH . H 4 HOH B 26 426 41 HOH HOH . H 4 HOH B 27 427 43 HOH HOH . H 4 HOH B 28 428 47 HOH HOH . H 4 HOH B 29 429 54 HOH HOH . H 4 HOH B 30 430 55 HOH HOH . H 4 HOH B 31 431 56 HOH HOH . H 4 HOH B 32 432 57 HOH HOH . H 4 HOH B 33 433 60 HOH HOH . H 4 HOH B 34 434 63 HOH HOH . H 4 HOH B 35 435 65 HOH HOH . H 4 HOH B 36 436 69 HOH HOH . H 4 HOH B 37 437 70 HOH HOH . H 4 HOH B 38 438 71 HOH HOH . H 4 HOH B 39 439 73 HOH HOH . H 4 HOH B 40 440 74 HOH HOH . H 4 HOH B 41 441 77 HOH HOH . H 4 HOH B 42 442 78 HOH HOH . H 4 HOH B 43 443 80 HOH HOH . H 4 HOH B 44 444 81 HOH HOH . H 4 HOH B 45 445 82 HOH HOH . H 4 HOH B 46 446 84 HOH HOH . H 4 HOH B 47 447 89 HOH HOH . H 4 HOH B 48 448 91 HOH HOH . H 4 HOH B 49 449 92 HOH HOH . H 4 HOH B 50 450 96 HOH HOH . H 4 HOH B 51 451 97 HOH HOH . H 4 HOH B 52 452 98 HOH HOH . H 4 HOH B 53 453 99 HOH HOH . H 4 HOH B 54 454 100 HOH HOH . H 4 HOH B 55 455 101 HOH HOH . H 4 HOH B 56 456 103 HOH HOH . H 4 HOH B 57 457 105 HOH HOH . H 4 HOH B 58 458 111 HOH HOH . H 4 HOH B 59 459 112 HOH HOH . H 4 HOH B 60 460 119 HOH HOH . H 4 HOH B 61 461 124 HOH HOH . H 4 HOH B 62 462 126 HOH HOH . H 4 HOH B 63 463 127 HOH HOH . H 4 HOH B 64 464 128 HOH HOH . H 4 HOH B 65 465 129 HOH HOH . H 4 HOH B 66 466 131 HOH HOH . H 4 HOH B 67 467 133 HOH HOH . H 4 HOH B 68 468 135 HOH HOH . H 4 HOH B 69 469 141 HOH HOH . H 4 HOH B 70 470 145 HOH HOH . H 4 HOH B 71 471 150 HOH HOH . H 4 HOH B 72 472 152 HOH HOH . H 4 HOH B 73 473 153 HOH HOH . H 4 HOH B 74 474 154 HOH HOH . H 4 HOH B 75 475 160 HOH HOH . H 4 HOH B 76 476 162 HOH HOH . H 4 HOH B 77 477 164 HOH HOH . H 4 HOH B 78 478 165 HOH HOH . H 4 HOH B 79 479 170 HOH HOH . H 4 HOH B 80 480 171 HOH HOH . H 4 HOH B 81 481 172 HOH HOH . H 4 HOH B 82 482 173 HOH HOH . H 4 HOH B 83 483 181 HOH HOH . H 4 HOH B 84 484 182 HOH HOH . H 4 HOH B 85 485 184 HOH HOH . H 4 HOH B 86 486 185 HOH HOH . H 4 HOH B 87 487 186 HOH HOH . H 4 HOH B 88 488 187 HOH HOH . H 4 HOH B 89 489 188 HOH HOH . H 4 HOH B 90 490 189 HOH HOH . H 4 HOH B 91 491 193 HOH HOH . H 4 HOH B 92 492 195 HOH HOH . I 4 HOH A 1 401 2 HOH HOH . I 4 HOH A 2 402 4 HOH HOH . I 4 HOH A 3 403 5 HOH HOH . I 4 HOH A 4 404 10 HOH HOH . I 4 HOH A 5 405 12 HOH HOH . I 4 HOH A 6 406 14 HOH HOH . I 4 HOH A 7 407 16 HOH HOH . I 4 HOH A 8 408 23 HOH HOH . I 4 HOH A 9 409 24 HOH HOH . I 4 HOH A 10 410 25 HOH HOH . I 4 HOH A 11 411 26 HOH HOH . I 4 HOH A 12 412 28 HOH HOH . I 4 HOH A 13 413 30 HOH HOH . I 4 HOH A 14 414 38 HOH HOH . I 4 HOH A 15 415 39 HOH HOH . I 4 HOH A 16 416 42 HOH HOH . I 4 HOH A 17 417 44 HOH HOH . I 4 HOH A 18 418 45 HOH HOH . I 4 HOH A 19 419 46 HOH HOH . I 4 HOH A 20 420 48 HOH HOH . I 4 HOH A 21 421 49 HOH HOH . I 4 HOH A 22 422 50 HOH HOH . I 4 HOH A 23 423 51 HOH HOH . I 4 HOH A 24 424 53 HOH HOH . I 4 HOH A 25 425 58 HOH HOH . I 4 HOH A 26 426 59 HOH HOH . I 4 HOH A 27 427 61 HOH HOH . I 4 HOH A 28 428 62 HOH HOH . I 4 HOH A 29 429 64 HOH HOH . I 4 HOH A 30 430 66 HOH HOH . I 4 HOH A 31 431 67 HOH HOH . I 4 HOH A 32 432 68 HOH HOH . I 4 HOH A 33 433 75 HOH HOH . I 4 HOH A 34 434 76 HOH HOH . I 4 HOH A 35 435 79 HOH HOH . I 4 HOH A 36 436 83 HOH HOH . I 4 HOH A 37 437 85 HOH HOH . I 4 HOH A 38 438 86 HOH HOH . I 4 HOH A 39 439 87 HOH HOH . I 4 HOH A 40 440 88 HOH HOH . I 4 HOH A 41 441 90 HOH HOH . I 4 HOH A 42 442 93 HOH HOH . I 4 HOH A 43 443 94 HOH HOH . I 4 HOH A 44 444 95 HOH HOH . I 4 HOH A 45 445 102 HOH HOH . I 4 HOH A 46 446 104 HOH HOH . I 4 HOH A 47 447 106 HOH HOH . I 4 HOH A 48 448 107 HOH HOH . I 4 HOH A 49 449 108 HOH HOH . I 4 HOH A 50 450 109 HOH HOH . I 4 HOH A 51 451 110 HOH HOH . I 4 HOH A 52 452 113 HOH HOH . I 4 HOH A 53 453 114 HOH HOH . I 4 HOH A 54 454 115 HOH HOH . I 4 HOH A 55 455 116 HOH HOH . I 4 HOH A 56 456 117 HOH HOH . I 4 HOH A 57 457 118 HOH HOH . I 4 HOH A 58 458 120 HOH HOH . I 4 HOH A 59 459 121 HOH HOH . I 4 HOH A 60 460 122 HOH HOH . I 4 HOH A 61 461 123 HOH HOH . I 4 HOH A 62 462 125 HOH HOH . I 4 HOH A 63 463 130 HOH HOH . I 4 HOH A 64 464 132 HOH HOH . I 4 HOH A 65 465 134 HOH HOH . I 4 HOH A 66 466 136 HOH HOH . I 4 HOH A 67 467 137 HOH HOH . I 4 HOH A 68 468 138 HOH HOH . I 4 HOH A 69 469 139 HOH HOH . I 4 HOH A 70 470 140 HOH HOH . I 4 HOH A 71 471 142 HOH HOH . I 4 HOH A 72 472 143 HOH HOH . I 4 HOH A 73 473 144 HOH HOH . I 4 HOH A 74 474 146 HOH HOH . I 4 HOH A 75 475 147 HOH HOH . I 4 HOH A 76 476 148 HOH HOH . I 4 HOH A 77 477 149 HOH HOH . I 4 HOH A 78 478 155 HOH HOH . I 4 HOH A 79 479 156 HOH HOH . I 4 HOH A 80 480 157 HOH HOH . I 4 HOH A 81 481 158 HOH HOH . I 4 HOH A 82 482 159 HOH HOH . I 4 HOH A 83 483 161 HOH HOH . I 4 HOH A 84 484 163 HOH HOH . I 4 HOH A 85 485 166 HOH HOH . I 4 HOH A 86 486 167 HOH HOH . I 4 HOH A 87 487 168 HOH HOH . I 4 HOH A 88 488 169 HOH HOH . I 4 HOH A 89 489 174 HOH HOH . I 4 HOH A 90 490 175 HOH HOH . I 4 HOH A 91 491 176 HOH HOH . I 4 HOH A 92 492 177 HOH HOH . I 4 HOH A 93 493 178 HOH HOH . I 4 HOH A 94 494 179 HOH HOH . I 4 HOH A 95 495 180 HOH HOH . I 4 HOH A 96 496 183 HOH HOH . I 4 HOH A 97 497 190 HOH HOH . I 4 HOH A 98 498 191 HOH HOH . I 4 HOH A 99 499 192 HOH HOH . I 4 HOH A 100 500 194 HOH HOH . I 4 HOH A 101 501 196 HOH HOH . I 4 HOH A 102 502 197 HOH HOH . I 4 HOH A 103 503 198 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . D 3 121.199 124.692 -40.897 1 46.26 ? C1B LMT 302 B 1 HETATM 2 C C2B LMT . . . D 3 120.208 123.547 -40.806 1 47.55 ? C2B LMT 302 B 1 HETATM 3 C C3B LMT . . . D 3 120.308 122.608 -41.996 1 46.22 ? C3B LMT 302 B 1 HETATM 4 C C4B LMT . . . D 3 121.228 123.329 -42.997 1 45.75 ? C4B LMT 302 B 1 HETATM 5 C C5B LMT . . . D 3 122.599 123.5 -42.299 1 46.99 ? C5B LMT 302 B 1 HETATM 6 C C6B LMT . . . D 3 123.659 124.51 -42.725 1 50.4 ? C6B LMT 302 B 1 HETATM 7 O O1B LMT . . . D 3 121.334 125.288 -39.642 1 51.01 ? O1B LMT 302 B 1 HETATM 8 O O2B LMT . . . D 3 120.556 122.825 -39.629 1 43.7 ? O2B LMT 302 B 1 HETATM 9 O O3B LMT . . . D 3 118.978 122.232 -42.478 1 39.41 ? O3B LMT 302 B 1 HETATM 10 O O4' LMT . . . D 3 121.297 122.52 -44.171 1 45 ? O4' LMT 302 B 1 HETATM 11 O O5B LMT . . . D 3 122.356 123.934 -40.987 1 48.44 ? O5B LMT 302 B 1 HETATM 12 O O6B LMT . . . D 3 124.846 124.383 -41.841 1 46.49 ? O6B LMT 302 B 1 HETATM 13 C C1' LMT . . . D 3 121.44 129.357 -39.865 1 41.93 ? C1' LMT 302 B 1 HETATM 14 C C2' LMT . . . D 3 122.729 128.707 -39.434 1 39.02 ? C2' LMT 302 B 1 HETATM 15 C C3' LMT . . . D 3 122.704 127.347 -40.122 1 40.87 ? C3' LMT 302 B 1 HETATM 16 C C4' LMT . . . D 3 121.492 126.679 -39.437 1 46.72 ? C4' LMT 302 B 1 HETATM 17 C C5' LMT . . . D 3 120.155 127.374 -39.708 1 48.73 ? C5' LMT 302 B 1 HETATM 18 C C6' LMT . . . D 3 119 126.685 -38.95 1 50.77 ? C6' LMT 302 B 1 HETATM 19 O O1' LMT . . . D 3 121.477 130.742 -39.543 1 41.8 ? O1' LMT 302 B 1 HETATM 20 O O2' LMT . . . D 3 123.847 129.5 -39.79 1 37.03 ? O2' LMT 302 B 1 HETATM 21 O O3' LMT . . . D 3 123.931 126.675 -39.879 1 33.89 ? O3' LMT 302 B 1 HETATM 22 O O5' LMT . . . D 3 120.348 128.69 -39.222 1 43.32 ? O5' LMT 302 B 1 HETATM 23 O O6' LMT . . . D 3 117.77 127.422 -39.017 1 52.44 ? O6' LMT 302 B 1 HETATM 24 C C1 LMT . . . D 3 120.925 130.971 -38.263 1 35.54 ? C1 LMT 302 B 1 HETATM 25 C C2 LMT . . . D 3 119.89 132.013 -38.515 1 35.13 ? C2 LMT 302 B 1 HETATM 26 C C3 LMT . . . D 3 120.299 133.032 -39.554 1 34.79 ? C3 LMT 302 B 1 HETATM 27 C C4 LMT . . . D 3 119.397 134.18 -39.233 1 36.74 ? C4 LMT 302 B 1 HETATM 28 C C5 LMT . . . D 3 119.621 135.341 -40.18 1 40.38 ? C5 LMT 302 B 1 HETATM 29 C C6 LMT . . . D 3 118.575 136.394 -39.823 1 37.32 ? C6 LMT 302 B 1 HETATM 30 C C7 LMT . . . D 3 118.308 137.174 -41.083 1 37.62 ? C7 LMT 302 B 1 HETATM 31 C C8 LMT . . . D 3 117.482 138.428 -40.813 1 36.59 ? C8 LMT 302 B 1 HETATM 32 C C9 LMT . . . D 3 118.13 139.556 -41.612 1 36.1 ? C9 LMT 302 B 1 HETATM 33 C C10 LMT . . . D 3 117.404 140.859 -41.384 1 33.89 ? C10 LMT 302 B 1 HETATM 34 C C11 LMT . . . D 3 118.032 141.997 -42.152 1 32.91 ? C11 LMT 302 B 1 HETATM 35 C C12 LMT . . . D 3 118.185 143.269 -41.323 1 35.35 ? C12 LMT 302 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 35 #