data_4MLF # _model_server_result.job_id M3e5Gx_vOW2f7XN2IWBihA _model_server_result.datetime_utc '2024-10-28 02:22:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mlf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":404}' # _entry.id 4MLF # _exptl.entry_id 4MLF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MLF _cell.length_a 89.506 _cell.length_b 89.506 _cell.length_c 133.148 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MLF _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 1 1_555 B SG CYS 119 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 B SG CYS 28 B CYS 42 1_555 B SG CYS 44 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf3 B SG CYS 173 B CYS 168 1_555 B SG CYS 187 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf4 B SG CYS 201 B CYS 191 1_555 B SG CYS 231 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? disulf ? disulf5 C SG CYS 6 D CYS 306 1_555 C SG CYS 14 D CYS 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 C SG CYS 16 D CYS 316 1_555 C SG CYS 28 D CYS 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf7 C SG CYS 22 D CYS 322 1_555 C SG CYS 39 D CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? covale ? covale1 B ND2 ASN 53 B ASN 60 1_555 E C1 NAG . B NAG 402 1_555 G ? ? ? ? ? ? ? ? ? ? ? 1.444 ? metalc ? metalc1 B O ARG 233 B ARG 221 1_555 D NA NA . B NA 401 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc2 B O LYS 236 B LYS 224 1_555 D NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc3 D NA NA . B NA 401 1_555 J O HOH . B HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc4 D NA NA . B NA 401 1_555 J O HOH . B HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc5 D NA NA . B NA 401 1_555 J O HOH . B HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc6 D NA NA . B NA 401 1_555 J O HOH . B HOH 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4MLF _atom_sites.fract_transf_matrix[1][1] 0.011172 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA B 1 401 401 NA NA . E 5 NAG B 1 402 701 NAG NAG . F 6 ACT B 1 403 702 ACT ACT . G 6 ACT B 1 404 703 ACT ACT . H 6 ACT B 1 405 704 ACT ACT . I 7 HOH A 1 101 19 HOH HOH . I 7 HOH A 2 102 31 HOH HOH . I 7 HOH A 3 103 37 HOH HOH . I 7 HOH A 4 104 46 HOH HOH . I 7 HOH A 5 105 53 HOH HOH . I 7 HOH A 6 106 62 HOH HOH . I 7 HOH A 7 107 72 HOH HOH . I 7 HOH A 8 108 75 HOH HOH . I 7 HOH A 9 109 93 HOH HOH . J 7 HOH B 1 501 1 HOH HOH . J 7 HOH B 2 502 3 HOH HOH . J 7 HOH B 3 503 4 HOH HOH . J 7 HOH B 4 504 6 HOH HOH . J 7 HOH B 5 505 7 HOH HOH . J 7 HOH B 6 506 8 HOH HOH . J 7 HOH B 7 507 9 HOH HOH . J 7 HOH B 8 508 11 HOH HOH . J 7 HOH B 9 509 13 HOH HOH . J 7 HOH B 10 510 14 HOH HOH . J 7 HOH B 11 511 15 HOH HOH . J 7 HOH B 12 512 16 HOH HOH . J 7 HOH B 13 513 17 HOH HOH . J 7 HOH B 14 514 18 HOH HOH . J 7 HOH B 15 515 20 HOH HOH . J 7 HOH B 16 516 21 HOH HOH . J 7 HOH B 17 517 22 HOH HOH . J 7 HOH B 18 518 23 HOH HOH . J 7 HOH B 19 519 25 HOH HOH . J 7 HOH B 20 520 26 HOH HOH . J 7 HOH B 21 521 28 HOH HOH . J 7 HOH B 22 522 29 HOH HOH . J 7 HOH B 23 523 30 HOH HOH . J 7 HOH B 24 524 33 HOH HOH . J 7 HOH B 25 525 35 HOH HOH . J 7 HOH B 26 526 36 HOH HOH . J 7 HOH B 27 527 38 HOH HOH . J 7 HOH B 28 528 39 HOH HOH . J 7 HOH B 29 529 40 HOH HOH . J 7 HOH B 30 530 41 HOH HOH . J 7 HOH B 31 531 42 HOH HOH . J 7 HOH B 32 532 43 HOH HOH . J 7 HOH B 33 533 44 HOH HOH . J 7 HOH B 34 534 45 HOH HOH . J 7 HOH B 35 535 47 HOH HOH . J 7 HOH B 36 536 48 HOH HOH . J 7 HOH B 37 537 49 HOH HOH . J 7 HOH B 38 538 50 HOH HOH . J 7 HOH B 39 539 51 HOH HOH . J 7 HOH B 40 540 52 HOH HOH . J 7 HOH B 41 541 54 HOH HOH . J 7 HOH B 42 542 55 HOH HOH . J 7 HOH B 43 543 56 HOH HOH . J 7 HOH B 44 544 57 HOH HOH . J 7 HOH B 45 545 58 HOH HOH . J 7 HOH B 46 546 59 HOH HOH . J 7 HOH B 47 547 60 HOH HOH . J 7 HOH B 48 548 61 HOH HOH . J 7 HOH B 49 549 63 HOH HOH . J 7 HOH B 50 550 65 HOH HOH . J 7 HOH B 51 551 66 HOH HOH . J 7 HOH B 52 552 68 HOH HOH . J 7 HOH B 53 553 69 HOH HOH . J 7 HOH B 54 554 70 HOH HOH . J 7 HOH B 55 555 73 HOH HOH . J 7 HOH B 56 556 74 HOH HOH . J 7 HOH B 57 557 76 HOH HOH . J 7 HOH B 58 558 77 HOH HOH . J 7 HOH B 59 559 78 HOH HOH . J 7 HOH B 60 560 79 HOH HOH . J 7 HOH B 61 561 81 HOH HOH . J 7 HOH B 62 562 84 HOH HOH . J 7 HOH B 63 563 85 HOH HOH . J 7 HOH B 64 564 87 HOH HOH . J 7 HOH B 65 565 88 HOH HOH . J 7 HOH B 66 566 89 HOH HOH . J 7 HOH B 67 567 90 HOH HOH . J 7 HOH B 68 568 91 HOH HOH . J 7 HOH B 69 569 92 HOH HOH . J 7 HOH B 70 570 94 HOH HOH . J 7 HOH B 71 571 95 HOH HOH . J 7 HOH B 72 572 96 HOH HOH . J 7 HOH B 73 573 97 HOH HOH . J 7 HOH B 74 574 98 HOH HOH . J 7 HOH B 75 575 86 HOH HOH . K 7 HOH D 1 401 82 HOH HOH . K 7 HOH D 2 402 2 HOH HOH . K 7 HOH D 3 403 5 HOH HOH . K 7 HOH D 4 404 10 HOH HOH . K 7 HOH D 5 405 12 HOH HOH . K 7 HOH D 6 406 24 HOH HOH . K 7 HOH D 7 407 27 HOH HOH . K 7 HOH D 8 408 32 HOH HOH . K 7 HOH D 9 409 34 HOH HOH . K 7 HOH D 10 410 64 HOH HOH . K 7 HOH D 11 411 67 HOH HOH . K 7 HOH D 12 412 71 HOH HOH . K 7 HOH D 13 413 80 HOH HOH . K 7 HOH D 14 414 83 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . G 6 9.676 -17.631 -12.884 1 65.68 ? C ACT 404 B 1 HETATM 2 O O ACT . . . G 6 9.155 -16.876 -13.742 1 65.47 ? O ACT 404 B 1 HETATM 3 O OXT ACT . . . G 6 10.908 -17.456 -12.713 1 65.23 ? OXT ACT 404 B 1 HETATM 4 C CH3 ACT . . . G 6 8.869 -18.669 -12.135 1 65.29 ? CH3 ACT 404 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #