data_4MM1 # _model_server_result.job_id 85_D8QEkNK9hBMr2Su6rag _model_server_result.datetime_utc '2024-11-14 04:46:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mm1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":302}' # _entry.id 4MM1 # _exptl.entry_id 4MM1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.5 _cell.angle_gamma 90 _cell.entry_id 4MM1 _cell.length_a 143.675 _cell.length_b 148.756 _cell.length_c 91.503 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA hexameric 6 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 1 1 A,B,G,H,I,J,S,T 2 1 C,E,K,L,O,P,U,W 3 1 D,F,M,N,Q,R,V,X 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 255 n n C1 C2 PGE sing 256 n n C1 H1 PGE sing 257 n n C1 H12 PGE sing 258 n n O1 HO1 PGE sing 259 n n C2 O2 PGE sing 260 n n C2 H2 PGE sing 261 n n C2 H22 PGE sing 262 n n O2 C3 PGE sing 263 n n C3 C4 PGE sing 264 n n C3 H3 PGE sing 265 n n C3 H32 PGE sing 266 n n C4 O3 PGE sing 267 n n C4 H4 PGE sing 268 n n C4 H42 PGE sing 269 n n O4 C6 PGE sing 270 n n O4 HO4 PGE sing 271 n n C6 C5 PGE sing 272 n n C6 H6 PGE sing 273 n n C6 H62 PGE sing 274 n n C5 O3 PGE sing 275 n n C5 H5 PGE sing 276 n n C5 H52 PGE sing 277 n n # _atom_sites.entry_id 4MM1 _atom_sites.fract_transf_matrix[1][1] 0.00696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002465 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011594 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 1GP A 1 301 1 1GP 1GP . H 3 PGE A 1 302 1 PGE PGE . I 2 1GP B 1 301 2 1GP 1GP . J 3 PGE B 1 302 2 PGE PGE . K 2 1GP C 1 301 3 1GP 1GP . L 3 PGE C 1 302 3 PGE PGE . M 2 1GP D 1 301 4 1GP 1GP . N 3 PGE D 1 302 4 PGE PGE . O 2 1GP E 1 301 5 1GP 1GP . P 3 PGE E 1 302 5 PGE PGE . Q 2 1GP F 1 301 6 1GP 1GP . R 3 PGE F 1 302 6 PGE PGE . S 4 HOH A 1 401 2 HOH HOH . S 4 HOH A 2 402 4 HOH HOH . S 4 HOH A 3 403 11 HOH HOH . S 4 HOH A 4 404 12 HOH HOH . S 4 HOH A 5 405 13 HOH HOH . S 4 HOH A 6 406 19 HOH HOH . S 4 HOH A 7 407 28 HOH HOH . S 4 HOH A 8 408 32 HOH HOH . S 4 HOH A 9 409 41 HOH HOH . S 4 HOH A 10 410 45 HOH HOH . S 4 HOH A 11 411 46 HOH HOH . S 4 HOH A 12 412 50 HOH HOH . S 4 HOH A 13 413 51 HOH HOH . S 4 HOH A 14 414 56 HOH HOH . S 4 HOH A 15 415 59 HOH HOH . S 4 HOH A 16 416 60 HOH HOH . S 4 HOH A 17 417 63 HOH HOH . S 4 HOH A 18 418 65 HOH HOH . S 4 HOH A 19 419 67 HOH HOH . T 4 HOH B 1 401 26 HOH HOH . T 4 HOH B 2 402 30 HOH HOH . T 4 HOH B 3 403 34 HOH HOH . T 4 HOH B 4 404 36 HOH HOH . T 4 HOH B 5 405 37 HOH HOH . T 4 HOH B 6 406 39 HOH HOH . T 4 HOH B 7 407 44 HOH HOH . T 4 HOH B 8 408 47 HOH HOH . T 4 HOH B 9 409 64 HOH HOH . T 4 HOH B 10 410 66 HOH HOH . U 4 HOH C 1 401 1 HOH HOH . U 4 HOH C 2 402 6 HOH HOH . U 4 HOH C 3 403 7 HOH HOH . U 4 HOH C 4 404 9 HOH HOH . U 4 HOH C 5 405 24 HOH HOH . U 4 HOH C 6 406 27 HOH HOH . U 4 HOH C 7 407 33 HOH HOH . U 4 HOH C 8 408 43 HOH HOH . U 4 HOH C 9 409 48 HOH HOH . U 4 HOH C 10 410 52 HOH HOH . U 4 HOH C 11 411 54 HOH HOH . U 4 HOH C 12 412 58 HOH HOH . U 4 HOH C 13 413 61 HOH HOH . U 4 HOH C 14 414 62 HOH HOH . U 4 HOH C 15 415 71 HOH HOH . V 4 HOH D 1 401 3 HOH HOH . V 4 HOH D 2 402 10 HOH HOH . V 4 HOH D 3 403 18 HOH HOH . V 4 HOH D 4 404 38 HOH HOH . V 4 HOH D 5 405 53 HOH HOH . V 4 HOH D 6 406 55 HOH HOH . V 4 HOH D 7 407 70 HOH HOH . V 4 HOH D 8 408 72 HOH HOH . V 4 HOH D 9 409 73 HOH HOH . W 4 HOH E 1 401 8 HOH HOH . W 4 HOH E 2 402 14 HOH HOH . W 4 HOH E 3 403 15 HOH HOH . W 4 HOH E 4 404 22 HOH HOH . W 4 HOH E 5 405 23 HOH HOH . W 4 HOH E 6 406 29 HOH HOH . W 4 HOH E 7 407 35 HOH HOH . W 4 HOH E 8 408 40 HOH HOH . W 4 HOH E 9 409 49 HOH HOH . W 4 HOH E 10 410 68 HOH HOH . W 4 HOH E 11 411 69 HOH HOH . X 4 HOH F 1 401 5 HOH HOH . X 4 HOH F 2 402 20 HOH HOH . X 4 HOH F 3 403 31 HOH HOH . X 4 HOH F 4 404 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . J 3 14.523 50.102 29.796 1 37.7 ? C1 PGE 302 B 1 HETATM 2 O O1 PGE . . . J 3 13.346 50.136 29.071 1 42.32 ? O1 PGE 302 B 1 HETATM 3 C C2 PGE . . . J 3 14.246 49.587 31.168 1 37.47 ? C2 PGE 302 B 1 HETATM 4 O O2 PGE . . . J 3 15.069 50.208 32.083 1 36.5 ? O2 PGE 302 B 1 HETATM 5 C C3 PGE . . . J 3 14.608 50.312 33.377 1 41.28 ? C3 PGE 302 B 1 HETATM 6 C C4 PGE . . . J 3 15.581 51.036 34.242 1 43.72 ? C4 PGE 302 B 1 HETATM 7 O O4 PGE . . . J 3 15.368 52.3 38.784 1 47.2 ? O4 PGE 302 B 1 HETATM 8 C C6 PGE . . . J 3 14.713 51.742 37.707 1 42.95 ? C6 PGE 302 B 1 HETATM 9 C C5 PGE . . . J 3 15.538 51.914 36.478 1 43.14 ? C5 PGE 302 B 1 HETATM 10 O O3 PGE . . . J 3 15.069 51.042 35.521 1 44.44 ? O3 PGE 302 B 1 HETATM 11 H H1 PGE . . . J 3 15.17 49.526 29.354 1 45.24 ? H1 PGE 302 B 1 HETATM 12 H H12 PGE . . . J 3 14.881 51.005 29.859 1 45.24 ? H12 PGE 302 B 1 HETATM 13 H HO1 PGE . . . J 3 12.799 49.504 29.368 1 50.78 ? HO1 PGE 302 B 1 HETATM 14 H H2 PGE . . . J 3 13.32 49.784 31.395 1 44.97 ? H2 PGE 302 B 1 HETATM 15 H H22 PGE . . . J 3 14.387 48.625 31.196 1 44.97 ? H22 PGE 302 B 1 HETATM 16 H H3 PGE . . . J 3 13.763 50.794 33.377 1 49.54 ? H3 PGE 302 B 1 HETATM 17 H H32 PGE . . . J 3 14.465 49.419 33.736 1 49.54 ? H32 PGE 302 B 1 HETATM 18 H H4 PGE . . . J 3 16.443 50.583 34.231 1 52.47 ? H4 PGE 302 B 1 HETATM 19 H H42 PGE . . . J 3 15.684 51.95 33.924 1 52.47 ? H42 PGE 302 B 1 HETATM 20 H HO4 PGE . . . J 3 15.97 51.726 39.093 1 56.64 ? HO4 PGE 302 B 1 HETATM 21 H H6 PGE . . . J 3 13.853 52.181 37.585 1 51.54 ? H6 PGE 302 B 1 HETATM 22 H H62 PGE . . . J 3 14.572 50.793 37.871 1 51.54 ? H62 PGE 302 B 1 HETATM 23 H H5 PGE . . . J 3 16.468 51.71 36.677 1 51.76 ? H5 PGE 302 B 1 HETATM 24 H H52 PGE . . . J 3 15.464 52.829 36.156 1 51.76 ? H52 PGE 302 B 1 # _model_server_stats.io_time_ms 34 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #