data_4MM4
#
_model_server_result.job_id            hmSL061TTISaheBKVHuZnQ 
_model_server_result.datetime_utc      '2024-11-23 23:49:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mm4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":603}' 
#
_entry.id    4MM4 
#
_exptl.entry_id    4MM4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.365 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Paroxetine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.78 
_cell.angle_gamma         90 
_cell.entry_id            4MM4 
_cell.length_a            88.424 
_cell.length_b            92.085 
_cell.length_c            84.772 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MM4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,J 1 1 
B,F,G,H,I,K 2 1 
A,B,C,D,E,F,G,H,I,J,K 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 20 A GLY 20 1_555 C NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc2 A O ALA 22 A ALA 22 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? 
metalc ? metalc3 A O VAL 23 A VAL 23 1_555 C NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? 
metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc5 A O SER 254 A SER 254 1_555 D NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc6 A O ALA 351 A ALA 351 1_555 C NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc7 A OG1 THR 354 A THR 354 1_555 C NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc8 A OG SER 355 A SER 355 1_555 C NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
metalc ? metalc9 D NA NA . A NA 602 1_555 J O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? 
metalc ? metalc10 B O GLY 20 B GLY 20 1_555 F NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc11 B O ALA 22 B ALA 22 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
metalc ? metalc12 B O VAL 23 B VAL 23 1_555 F NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc13 B OD1 ASN 27 B ASN 27 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? 
metalc ? metalc14 B O SER 254 B SER 254 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
metalc ? metalc15 B OD1 ASN 286 B ASN 286 1_555 G NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? 
metalc ? metalc16 B O ALA 351 B ALA 351 1_555 F NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? 
metalc ? metalc17 B OG1 THR 354 B THR 354 1_555 F NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc18 B OG SER 355 B SER 355 1_555 F NA NA . B NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
#
_chem_comp.formula           'C19 H20 F N O3' 
_chem_comp.formula_weight    329.365 
_chem_comp.id                8PR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Paroxetine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (3S,4R)-3-[(1,3-benzodioxol-5-yloxy)methyl]-4-(4-fluorophenyl)piperidine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FAA CAR 8PR sing 1 n n 
CAR CAB 8PR doub 2 n y 
CAB CAE 8PR sing 3 n y 
CAB HAB 8PR sing 4 n n 
CAR CAC 8PR sing 5 n y 
CAC CAF 8PR doub 6 n y 
CAC HAC 8PR sing 7 n n 
CAS CAD 8PR doub 8 n y 
CAD CAG 8PR sing 9 n y 
CAD HAD 8PR sing 10 n n 
CAE CAT 8PR doub 11 n y 
CAE HAE 8PR sing 12 n n 
CAF CAT 8PR sing 13 n y 
CAF HAF 8PR sing 14 n n 
CAU CAG 8PR doub 15 n y 
CAG HAG 8PR sing 16 n n 
CAH CAS 8PR sing 17 n y 
CAH CAV 8PR doub 18 n y 
CAH HAH 8PR sing 19 n n 
CAJ CAI 8PR sing 20 n n 
CAI NAN 8PR sing 21 n n 
CAI HAI 8PR sing 22 n n 
CAI HAIA 8PR sing 23 n n 
CAJ CAX 8PR sing 24 n n 
CAJ HAJ 8PR sing 25 n n 
CAJ HAJA 8PR sing 26 n n 
CAW CAK 8PR sing 27 n n 
NAN CAK 8PR sing 28 n n 
CAK HAK 8PR sing 29 n n 
CAK HAKA 8PR sing 30 n n 
OAQ CAL 8PR sing 31 n n 
OAP CAL 8PR sing 32 n n 
CAL HAL 8PR sing 33 n n 
CAL HALA 8PR sing 34 n n 
CAW CAM 8PR sing 35 n n 
CAM OAO 8PR sing 36 n n 
CAM HAM 8PR sing 37 n n 
CAM HAMA 8PR sing 38 n n 
NAN HNAN 8PR sing 39 n n 
OAO CAS 8PR sing 40 n n 
CAU OAP 8PR sing 41 n n 
CAV OAQ 8PR sing 42 n n 
CAT CAX 8PR sing 43 n n 
CAV CAU 8PR sing 44 n y 
CAX CAW 8PR sing 45 n n 
CAW HAW 8PR sing 46 n n 
CAX HAX 8PR sing 47 n n 
#
_atom_sites.entry_id                     4MM4 
_atom_sites.fract_transf_matrix[1][1]    0.011309 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000946 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01086 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011838 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 601 751 NA NA . 
D 2 NA A 1 602 752 NA NA . 
E 3 8PR A 1 603 1 8PR 8PR . 
F 2 NA B 1 601 751 NA NA . 
G 2 NA B 1 602 752 NA NA . 
H 3 8PR B 1 603 2 8PR 8PR . 
I 4 CL B 1 604 1 CL CL . 
J 5 HOH A 1 701 1 HOH HOH . 
J 5 HOH A 2 702 2 HOH HOH . 
K 5 HOH B 1 701 3 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 F FAA 8PR . . . H 3 90.593 -20.714 68.482 1 63.79 ? FAA 8PR 603 B 1 
HETATM 2 C CAB 8PR . . . H 3 91.024 -19.393 66.521 1 57.13 ? CAB 8PR 603 B 1 
HETATM 3 C CAC 8PR . . . H 3 89.043 -18.892 67.982 1 58.08 ? CAC 8PR 603 B 1 
HETATM 4 C CAD 8PR . . . H 3 92.795 -13.736 67.677 1 35.58 ? CAD 8PR 603 B 1 
HETATM 5 C CAE 8PR . . . H 3 90.659 -18.33 65.672 1 53.23 ? CAE 8PR 603 B 1 
HETATM 6 C CAF 8PR . . . H 3 88.687 -17.855 67.146 1 59.63 ? CAF 8PR 603 B 1 
HETATM 7 C CAG 8PR . . . H 3 93.732 -13.316 68.649 1 40.56 ? CAG 8PR 603 B 1 
HETATM 8 C CAH 8PR . . . H 3 94.577 -14.618 66.309 1 38.81 ? CAH 8PR 603 B 1 
HETATM 9 C CAI 8PR . . . H 3 88.359 -15.838 62.658 1 49.94 ? CAI 8PR 603 B 1 
HETATM 10 C CAJ 8PR . . . H 3 88.408 -16.837 63.778 1 56.01 ? CAJ 8PR 603 B 1 
HETATM 11 C CAK 8PR . . . H 3 90.292 -14.658 63.548 1 47.23 ? CAK 8PR 603 B 1 
HETATM 12 C CAL 8PR . . . H 3 97.324 -13.713 68.496 1 30 ? CAL 8PR 603 B 1 
HETATM 13 C CAM 8PR . . . H 3 91.029 -15.08 65.896 1 44.46 ? CAM 8PR 603 B 1 
HETATM 14 N NAN 8PR . . . H 3 89.7 -15.269 62.359 1 49.99 ? NAN 8PR 603 B 1 
HETATM 15 O OAO 8PR . . . H 3 92.378 -14.83 65.506 1 42.18 ? OAO 8PR 603 B 1 
HETATM 16 O OAP 8PR . . . H 3 96.206 -13.256 69.197 1 32.61 ? OAP 8PR 603 B 1 
HETATM 17 O OAQ 8PR . . . H 3 96.96 -14.284 67.369 1 27.38 ? OAQ 8PR 603 B 1 
HETATM 18 C CAR 8PR . . . H 3 90.232 -19.69 67.676 1 56.97 ? CAR 8PR 603 B 1 
HETATM 19 C CAS 8PR . . . H 3 93.265 -14.402 66.497 1 38.05 ? CAS 8PR 603 B 1 
HETATM 20 C CAT 8PR . . . H 3 89.488 -17.546 65.965 1 49.87 ? CAT 8PR 603 B 1 
HETATM 21 C CAU 8PR . . . H 3 95.067 -13.544 68.456 1 34.1 ? CAU 8PR 603 B 1 
HETATM 22 C CAV 8PR . . . H 3 95.521 -14.197 67.284 1 32.62 ? CAV 8PR 603 B 1 
HETATM 23 C CAW 8PR . . . H 3 90.386 -15.676 64.657 1 48.45 ? CAW 8PR 603 B 1 
HETATM 24 C CAX 8PR . . . H 3 89.097 -16.324 64.987 1 48.07 ? CAX 8PR 603 B 1 
#
_model_server_stats.io_time_ms              38 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           24 
#