data_4MM9 # _model_server_result.job_id XHuqN6vhgQ-EFmXNGJ13lg _model_server_result.datetime_utc '2024-11-13 22:22:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mm9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 4MM9 # _exptl.entry_id 4MM9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.335 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Fluvoxamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.76 _cell.angle_gamma 90 _cell.entry_id 4MM9 _cell.length_a 90.81 _cell.length_b 88.07 _cell.length_c 81.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MM9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc5 A O SER 254 A SER 254 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc6 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc7 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc8 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc9 A OG SER 355 A SER 355 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc10 C NA NA . A NA 602 1_555 E O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? # _chem_comp.formula 'C15 H21 F3 N2 O2' _chem_comp.formula_weight 318.335 _chem_comp.id FVX _chem_comp.mon_nstd_flag . _chem_comp.name Fluvoxamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-[({(1E)-5-methoxy-1-[4-(trifluoromethyl)phenyl]pentylidene}amino)oxy]ethanamine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N12 C11 FVX sing 70 n n C11 C10 FVX sing 71 n n C10 O9 FVX sing 72 n n O9 N8 FVX sing 73 n n N8 C7 FVX doub 74 e n C7 C13 FVX sing 75 n n C7 C6 FVX sing 76 n n C14 C13 FVX doub 77 n y C14 C15 FVX sing 78 n y C13 C18 FVX sing 79 n y C15 C16 FVX doub 80 n y C4 C5 FVX sing 81 n n C4 C3 FVX sing 82 n n C6 C5 FVX sing 83 n n C18 C17 FVX doub 84 n y C16 C17 FVX sing 85 n y C16 C19 FVX sing 86 n n F21 C19 FVX sing 87 n n C3 O2 FVX sing 88 n n F20 C19 FVX sing 89 n n C19 F22 FVX sing 90 n n O2 C1 FVX sing 91 n n C1 H1 FVX sing 92 n n C1 H2 FVX sing 93 n n C1 H3 FVX sing 94 n n C3 H4 FVX sing 95 n n C3 H5 FVX sing 96 n n C4 H6 FVX sing 97 n n C4 H7 FVX sing 98 n n C5 H8 FVX sing 99 n n C5 H9 FVX sing 100 n n C6 H10 FVX sing 101 n n C6 H11 FVX sing 102 n n C10 H12 FVX sing 103 n n C10 H13 FVX sing 104 n n C11 H14 FVX sing 105 n n C11 H15 FVX sing 106 n n N12 H16 FVX sing 107 n n N12 H17 FVX sing 108 n n C14 H19 FVX sing 109 n n C15 H20 FVX sing 110 n n C17 H21 FVX sing 111 n n C18 H22 FVX sing 112 n n # _atom_sites.entry_id 4MM9 _atom_sites.fract_transf_matrix[1][1] 0.011012 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000917 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011355 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 601 751 NA NA . C 2 NA A 1 602 752 NA NA . D 3 FVX A 1 603 1 FVX FVX . E 4 HOH A 1 701 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FVX . . . D 3 189.595 -22.078 97.938 1 67.34 ? C1 FVX 603 A 1 HETATM 2 O O2 FVX . . . D 3 188.559 -21.402 98.52 1 58.59 ? O2 FVX 603 A 1 HETATM 3 C C3 FVX . . . D 3 188.286 -20.049 97.939 1 55.28 ? C3 FVX 603 A 1 HETATM 4 C C4 FVX . . . D 3 189.382 -19.033 98.431 1 43.32 ? C4 FVX 603 A 1 HETATM 5 C C5 FVX . . . D 3 189.619 -17.781 97.502 1 52.72 ? C5 FVX 603 A 1 HETATM 6 C C6 FVX . . . D 3 190.29 -16.6 98.247 1 48.28 ? C6 FVX 603 A 1 HETATM 7 C C7 FVX . . . D 3 189.462 -16.214 99.53 1 39.56 ? C7 FVX 603 A 1 HETATM 8 N N8 FVX . . . D 3 190.225 -15.561 100.512 1 35.72 ? N8 FVX 603 A 1 HETATM 9 O O9 FVX . . . D 3 189.348 -15.227 101.62 1 50.07 ? O9 FVX 603 A 1 HETATM 10 C C10 FVX . . . D 3 190.032 -15.287 102.831 1 49.66 ? C10 FVX 603 A 1 HETATM 11 C C11 FVX . . . D 3 191.484 -15.742 102.633 1 49.05 ? C11 FVX 603 A 1 HETATM 12 N N12 FVX . . . D 3 191.709 -17.067 103.123 1 55.26 ? N12 FVX 603 A 1 HETATM 13 C C13 FVX . . . D 3 188.119 -15.629 99.15 1 33.56 ? C13 FVX 603 A 1 HETATM 14 C C14 FVX . . . D 3 187.916 -14.875 97.917 1 33.66 ? C14 FVX 603 A 1 HETATM 15 C C15 FVX . . . D 3 186.672 -14.413 97.614 1 25.74 ? C15 FVX 603 A 1 HETATM 16 C C16 FVX . . . D 3 185.572 -14.667 98.473 1 23.7 ? C16 FVX 603 A 1 HETATM 17 C C17 FVX . . . D 3 185.774 -15.415 99.664 1 22.51 ? C17 FVX 603 A 1 HETATM 18 C C18 FVX . . . D 3 187.037 -15.889 99.976 1 28.96 ? C18 FVX 603 A 1 HETATM 19 C C19 FVX . . . D 3 184.2 -14.166 98.133 1 29.79 ? C19 FVX 603 A 1 HETATM 20 F F20 FVX . . . D 3 183.74 -13.317 99.058 1 42.19 ? F20 FVX 603 A 1 HETATM 21 F F21 FVX . . . D 3 184.203 -13.563 96.943 1 28.23 ? F21 FVX 603 A 1 HETATM 22 F F22 FVX . . . D 3 183.318 -15.211 98.069 1 27.31 ? F22 FVX 603 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #