data_4MMB # _model_server_result.job_id QewLzN1SgJivT_Tfi3m5MA _model_server_result.datetime_utc '2024-11-27 00:23:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mmb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 4MMB # _exptl.entry_id 4MMB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.51 _cell.angle_gamma 90 _cell.entry_id 4MMB _cell.length_a 86.189 _cell.length_b 87.303 _cell.length_c 81.014 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MMB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc5 A O SER 254 A SER 254 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc6 A OG SER 254 A SER 254 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc11 C NA NA . A NA 602 1_555 G O HOH . A HOH 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4MMB _atom_sites.fract_transf_matrix[1][1] 0.011602 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000915 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 601 751 NA NA . C 2 NA A 1 602 752 NA NA . D 3 SRE A 1 603 1 SRE SRE . E 4 BOG A 1 604 1 BOG BOG . F 4 BOG A 1 605 2 BOG BOG . G 5 HOH A 1 701 1 HOH HOH . G 5 HOH A 2 702 2 HOH HOH . G 5 HOH A 3 703 3 HOH HOH . G 5 HOH A 4 704 4 HOH HOH . G 5 HOH A 5 705 5 HOH HOH . G 5 HOH A 6 706 6 HOH HOH . G 5 HOH A 7 707 8 HOH HOH . G 5 HOH A 8 708 9 HOH HOH . G 5 HOH A 9 709 10 HOH HOH . G 5 HOH A 10 710 11 HOH HOH . G 5 HOH A 11 711 12 HOH HOH . G 5 HOH A 12 712 13 HOH HOH . G 5 HOH A 13 713 14 HOH HOH . G 5 HOH A 14 714 15 HOH HOH . G 5 HOH A 15 715 16 HOH HOH . G 5 HOH A 16 716 17 HOH HOH . G 5 HOH A 17 717 18 HOH HOH . G 5 HOH A 18 718 19 HOH HOH . G 5 HOH A 19 719 20 HOH HOH . G 5 HOH A 20 720 21 HOH HOH . G 5 HOH A 21 721 22 HOH HOH . G 5 HOH A 22 722 23 HOH HOH . G 5 HOH A 23 723 24 HOH HOH . G 5 HOH A 24 724 25 HOH HOH . G 5 HOH A 25 725 26 HOH HOH . G 5 HOH A 26 726 27 HOH HOH . G 5 HOH A 27 727 28 HOH HOH . G 5 HOH A 28 728 29 HOH HOH . G 5 HOH A 29 729 30 HOH HOH . G 5 HOH A 30 730 31 HOH HOH . G 5 HOH A 31 731 32 HOH HOH . G 5 HOH A 32 732 33 HOH HOH . G 5 HOH A 33 733 34 HOH HOH . G 5 HOH A 34 734 35 HOH HOH . G 5 HOH A 35 735 36 HOH HOH . G 5 HOH A 36 736 37 HOH HOH . G 5 HOH A 37 737 38 HOH HOH . G 5 HOH A 38 738 39 HOH HOH . G 5 HOH A 39 739 40 HOH HOH . G 5 HOH A 40 740 41 HOH HOH . G 5 HOH A 41 741 43 HOH HOH . G 5 HOH A 42 742 44 HOH HOH . G 5 HOH A 43 743 45 HOH HOH . G 5 HOH A 44 744 46 HOH HOH . G 5 HOH A 45 745 47 HOH HOH . G 5 HOH A 46 746 48 HOH HOH . G 5 HOH A 47 747 49 HOH HOH . G 5 HOH A 48 748 50 HOH HOH . G 5 HOH A 49 749 51 HOH HOH . G 5 HOH A 50 750 52 HOH HOH . G 5 HOH A 51 751 53 HOH HOH . G 5 HOH A 52 752 54 HOH HOH . G 5 HOH A 53 753 55 HOH HOH . G 5 HOH A 54 754 56 HOH HOH . G 5 HOH A 55 755 57 HOH HOH . G 5 HOH A 56 756 58 HOH HOH . G 5 HOH A 57 757 59 HOH HOH . G 5 HOH A 58 758 60 HOH HOH . G 5 HOH A 59 759 61 HOH HOH . G 5 HOH A 60 760 62 HOH HOH . G 5 HOH A 61 761 63 HOH HOH . G 5 HOH A 62 762 64 HOH HOH . G 5 HOH A 63 763 65 HOH HOH . G 5 HOH A 64 764 66 HOH HOH . G 5 HOH A 65 765 67 HOH HOH . G 5 HOH A 66 766 68 HOH HOH . G 5 HOH A 67 767 70 HOH HOH . G 5 HOH A 68 768 71 HOH HOH . G 5 HOH A 69 769 72 HOH HOH . G 5 HOH A 70 770 73 HOH HOH . G 5 HOH A 71 771 74 HOH HOH . G 5 HOH A 72 772 75 HOH HOH . G 5 HOH A 73 773 76 HOH HOH . G 5 HOH A 74 774 77 HOH HOH . G 5 HOH A 75 775 78 HOH HOH . G 5 HOH A 76 776 79 HOH HOH . G 5 HOH A 77 777 80 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 92.366 _atom_site.Cartn_y -20.481 _atom_site.Cartn_z 186.041 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 602 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #