data_4MMC # _model_server_result.job_id 23lx5DXHnVtD-RTbImytKg _model_server_result.datetime_utc '2024-10-13 19:19:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mmc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4MMC # _exptl.entry_id 4MMC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.71 _cell.angle_gamma 90 _cell.entry_id 4MMC _cell.length_a 87.669 _cell.length_b 87.042 _cell.length_c 81.368 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MMC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 20 A GLY 20 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc2 A O ALA 22 A ALA 22 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc3 A O VAL 23 A VAL 23 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc4 A OD1 ASN 27 A ASN 27 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc5 A O SER 254 A SER 254 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc6 A OG SER 254 A SER 254 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc7 A OD1 ASN 286 A ASN 286 1_555 C NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc8 A O ALA 351 A ALA 351 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc9 A OG1 THR 354 A THR 354 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc10 A OG SER 355 A SER 355 1_555 B NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc11 C NA NA . A NA 602 1_555 H O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4MMC _atom_sites.fract_transf_matrix[1][1] 0.011407 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00094 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011489 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012332 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 601 751 NA NA . C 2 NA A 1 602 752 NA NA . D 3 29J A 1 603 3 29J DUM . E 3 29J A 1 604 4 29J DUM . F 4 BOG A 1 605 1 BOG BOG . G 4 BOG A 1 606 2 BOG BOG . H 5 HOH A 1 701 2 HOH HOH . H 5 HOH A 2 702 4 HOH HOH . H 5 HOH A 3 703 5 HOH HOH . H 5 HOH A 4 704 6 HOH HOH . H 5 HOH A 5 705 9 HOH HOH . H 5 HOH A 6 706 10 HOH HOH . H 5 HOH A 7 707 11 HOH HOH . H 5 HOH A 8 708 12 HOH HOH . H 5 HOH A 9 709 13 HOH HOH . H 5 HOH A 10 710 14 HOH HOH . H 5 HOH A 11 711 15 HOH HOH . H 5 HOH A 12 712 16 HOH HOH . H 5 HOH A 13 713 17 HOH HOH . H 5 HOH A 14 714 19 HOH HOH . H 5 HOH A 15 715 20 HOH HOH . H 5 HOH A 16 716 21 HOH HOH . H 5 HOH A 17 717 22 HOH HOH . H 5 HOH A 18 718 23 HOH HOH . H 5 HOH A 19 719 24 HOH HOH . H 5 HOH A 20 720 25 HOH HOH . H 5 HOH A 21 721 26 HOH HOH . H 5 HOH A 22 722 27 HOH HOH . H 5 HOH A 23 723 28 HOH HOH . H 5 HOH A 24 724 29 HOH HOH . H 5 HOH A 25 725 30 HOH HOH . H 5 HOH A 26 726 31 HOH HOH . H 5 HOH A 27 727 32 HOH HOH . H 5 HOH A 28 728 33 HOH HOH . H 5 HOH A 29 729 34 HOH HOH . H 5 HOH A 30 730 35 HOH HOH . H 5 HOH A 31 731 36 HOH HOH . H 5 HOH A 32 732 37 HOH HOH . H 5 HOH A 33 733 38 HOH HOH . H 5 HOH A 34 734 39 HOH HOH . H 5 HOH A 35 735 40 HOH HOH . H 5 HOH A 36 736 41 HOH HOH . H 5 HOH A 37 737 42 HOH HOH . H 5 HOH A 38 738 43 HOH HOH . H 5 HOH A 39 739 44 HOH HOH . H 5 HOH A 40 740 45 HOH HOH . H 5 HOH A 41 741 46 HOH HOH . H 5 HOH A 42 742 47 HOH HOH . H 5 HOH A 43 743 48 HOH HOH . H 5 HOH A 44 744 49 HOH HOH . H 5 HOH A 45 745 50 HOH HOH . H 5 HOH A 46 746 51 HOH HOH . H 5 HOH A 47 747 52 HOH HOH . H 5 HOH A 48 748 53 HOH HOH . H 5 HOH A 49 749 54 HOH HOH . H 5 HOH A 50 750 55 HOH HOH . H 5 HOH A 51 751 56 HOH HOH . H 5 HOH A 52 752 57 HOH HOH . H 5 HOH A 53 753 58 HOH HOH . H 5 HOH A 54 754 59 HOH HOH . H 5 HOH A 55 755 60 HOH HOH . H 5 HOH A 56 756 61 HOH HOH . H 5 HOH A 57 757 62 HOH HOH . H 5 HOH A 58 758 63 HOH HOH . H 5 HOH A 59 759 64 HOH HOH . H 5 HOH A 60 760 65 HOH HOH . H 5 HOH A 61 761 67 HOH HOH . H 5 HOH A 62 762 68 HOH HOH . H 5 HOH A 63 763 69 HOH HOH . H 5 HOH A 64 764 70 HOH HOH . H 5 HOH A 65 765 71 HOH HOH . H 5 HOH A 66 766 72 HOH HOH . H 5 HOH A 67 767 73 HOH HOH . H 5 HOH A 68 768 74 HOH HOH . H 5 HOH A 69 769 75 HOH HOH . H 5 HOH A 70 770 76 HOH HOH . H 5 HOH A 71 771 77 HOH HOH . H 5 HOH A 72 772 78 HOH HOH . H 5 HOH A 73 773 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 85.884 _atom_site.Cartn_y -18.715 _atom_site.Cartn_z 188.004 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #