data_4MMU # _model_server_result.job_id W1zyuO-O9rEuZLsf2sES2Q _model_server_result.datetime_utc '2024-11-25 21:49:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mmu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 4MMU # _exptl.entry_id 4MMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MMU _cell.length_a 168.588 _cell.length_b 168.588 _cell.length_c 168.588 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 37 1_555 B SG CYS 303 B CYS 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? disulf ? disulf2 A SG CYS 44 A CYS 69 1_555 B SG CYS 76 B CYS 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? disulf ? disulf3 B SG CYS 19 B CYS 155 1_555 B SG CYS 154 B CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? disulf ? disulf4 B SG CYS 177 B CYS 313 1_555 B SG CYS 207 B CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? disulf ? disulf5 B SG CYS 186 B CYS 322 1_555 B SG CYS 197 B CYS 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? disulf ? disulf6 B SG CYS 222 B CYS 358 1_555 B SG CYS 231 B CYS 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? disulf ? disulf7 B SG CYS 246 B CYS 382 1_555 B SG CYS 257 B CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? disulf ? disulf8 B SG CYS 280 B CYS 416 1_555 B SG CYS 286 B CYS 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? covale ? covale1 B ND2 ASN 364 B ASN 500 1_555 D C1 NAG . B NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.534 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4MMU _atom_sites.fract_transf_matrix[1][1] 0.005932 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005932 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 B 1 601 201 SO4 SO4 . D 4 NAG B 1 602 601 NAG NAG . E 3 SO4 B 1 603 2 SO4 SO4 . F 3 SO4 B 1 604 3 SO4 SO4 . G 3 SO4 B 1 605 4 SO4 SO4 . H 5 PO4 B 1 606 6 PO4 PO4 . I 6 HOH A 1 201 27 HOH HOH . I 6 HOH A 2 202 33 HOH HOH . I 6 HOH A 3 203 52 HOH HOH . I 6 HOH A 4 204 68 HOH HOH . I 6 HOH A 5 205 69 HOH HOH . I 6 HOH A 6 206 79 HOH HOH . I 6 HOH A 7 207 88 HOH HOH . I 6 HOH A 8 208 89 HOH HOH . I 6 HOH A 9 209 90 HOH HOH . I 6 HOH A 10 210 94 HOH HOH . I 6 HOH A 11 211 98 HOH HOH . I 6 HOH A 12 212 100 HOH HOH . J 6 HOH B 1 701 32 HOH HOH . J 6 HOH B 2 702 72 HOH HOH . J 6 HOH B 3 703 1 HOH HOH . J 6 HOH B 4 704 2 HOH HOH . J 6 HOH B 5 705 3 HOH HOH . J 6 HOH B 6 706 4 HOH HOH . J 6 HOH B 7 707 5 HOH HOH . J 6 HOH B 8 708 6 HOH HOH . J 6 HOH B 9 709 7 HOH HOH . J 6 HOH B 10 710 8 HOH HOH . J 6 HOH B 11 711 9 HOH HOH . J 6 HOH B 12 712 10 HOH HOH . J 6 HOH B 13 713 11 HOH HOH . J 6 HOH B 14 714 12 HOH HOH . J 6 HOH B 15 715 13 HOH HOH . J 6 HOH B 16 716 15 HOH HOH . J 6 HOH B 17 717 16 HOH HOH . J 6 HOH B 18 718 18 HOH HOH . J 6 HOH B 19 719 19 HOH HOH . J 6 HOH B 20 720 20 HOH HOH . J 6 HOH B 21 721 23 HOH HOH . J 6 HOH B 22 722 24 HOH HOH . J 6 HOH B 23 723 26 HOH HOH . J 6 HOH B 24 724 29 HOH HOH . J 6 HOH B 25 725 30 HOH HOH . J 6 HOH B 26 726 31 HOH HOH . J 6 HOH B 27 727 34 HOH HOH . J 6 HOH B 28 728 36 HOH HOH . J 6 HOH B 29 729 38 HOH HOH . J 6 HOH B 30 730 39 HOH HOH . J 6 HOH B 31 731 42 HOH HOH . J 6 HOH B 32 732 44 HOH HOH . J 6 HOH B 33 733 46 HOH HOH . J 6 HOH B 34 734 50 HOH HOH . J 6 HOH B 35 735 51 HOH HOH . J 6 HOH B 36 736 745 HOH HOH . J 6 HOH B 37 737 55 HOH HOH . J 6 HOH B 38 738 56 HOH HOH . J 6 HOH B 39 739 57 HOH HOH . J 6 HOH B 40 740 58 HOH HOH . J 6 HOH B 41 741 59 HOH HOH . J 6 HOH B 42 742 60 HOH HOH . J 6 HOH B 43 743 63 HOH HOH . J 6 HOH B 44 744 64 HOH HOH . J 6 HOH B 45 745 66 HOH HOH . J 6 HOH B 46 746 67 HOH HOH . J 6 HOH B 47 747 70 HOH HOH . J 6 HOH B 48 748 73 HOH HOH . J 6 HOH B 49 749 74 HOH HOH . J 6 HOH B 50 750 75 HOH HOH . J 6 HOH B 51 751 76 HOH HOH . J 6 HOH B 52 752 77 HOH HOH . J 6 HOH B 53 753 78 HOH HOH . J 6 HOH B 54 754 80 HOH HOH . J 6 HOH B 55 755 81 HOH HOH . J 6 HOH B 56 756 82 HOH HOH . J 6 HOH B 57 757 83 HOH HOH . J 6 HOH B 58 758 84 HOH HOH . J 6 HOH B 59 759 85 HOH HOH . J 6 HOH B 60 760 86 HOH HOH . J 6 HOH B 61 761 91 HOH HOH . J 6 HOH B 62 762 93 HOH HOH . J 6 HOH B 63 763 95 HOH HOH . J 6 HOH B 64 764 96 HOH HOH . J 6 HOH B 65 765 97 HOH HOH . J 6 HOH B 66 766 99 HOH HOH . J 6 HOH B 67 767 101 HOH HOH . J 6 HOH B 68 768 102 HOH HOH . J 6 HOH B 69 769 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . D 4 196.127 192.734 213.153 1 147.25 ? C1 NAG 602 B 1 HETATM 2 C C2 NAG . . . D 4 196.571 193.365 214.467 1 147.66 ? C2 NAG 602 B 1 HETATM 3 C C3 NAG . . . D 4 197.115 192.311 215.424 1 147.96 ? C3 NAG 602 B 1 HETATM 4 C C4 NAG . . . D 4 196.159 191.13 215.537 1 147.11 ? C4 NAG 602 B 1 HETATM 5 C C5 NAG . . . D 4 195.74 190.632 214.159 1 145.85 ? C5 NAG 602 B 1 HETATM 6 C C6 NAG . . . D 4 194.726 189.501 214.271 1 143.41 ? C6 NAG 602 B 1 HETATM 7 C C7 NAG . . . D 4 198.378 194.818 215.184 1 143.62 ? C7 NAG 602 B 1 HETATM 8 C C8 NAG . . . D 4 199.24 193.781 215.841 1 142.96 ? C8 NAG 602 B 1 HETATM 9 N N2 NAG . . . D 4 197.581 194.375 214.215 1 146.02 ? N2 NAG 602 B 1 HETATM 10 O O3 NAG . . . D 4 197.307 192.895 216.718 1 148.09 ? O3 NAG 602 B 1 HETATM 11 O O4 NAG . . . D 4 196.796 190.067 216.255 1 146.71 ? O4 NAG 602 B 1 HETATM 12 O O5 NAG . . . D 4 195.171 191.709 213.418 1 146.7 ? O5 NAG 602 B 1 HETATM 13 O O6 NAG . . . D 4 194.86 188.625 213.146 1 141.39 ? O6 NAG 602 B 1 HETATM 14 O O7 NAG . . . D 4 198.406 195.991 215.516 1 142.63 ? O7 NAG 602 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #