data_4MNG
#
_model_server_result.job_id            QzqPdrx6dAlETpoFnWIb_g 
_model_server_result.datetime_utc      '2024-11-14 13:26:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mng 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":303}' 
#
_entry.id    4MNG 
#
_exptl.entry_id    4MNG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4MNG 
_cell.length_a            229.333 
_cell.length_b            229.333 
_cell.length_c            52.646 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MNG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,I,J,O,Q 1 1 
C,D,F,K,L,M,N,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 25 B CYS 25 1_555 A SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 103 A CYS 102 1_555 B SG CYS 167 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf3 B SG CYS 207 A CYS 206 1_555 B SG CYS 262 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 C SG CYS 25 D CYS 25 1_555 C SG CYS 80 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 D SG CYS 103 C CYS 102 1_555 D SG CYS 167 C CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf6 D SG CYS 207 C CYS 206 1_555 D SG CYS 262 C CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 E SG CYS 23 E CYS 23 1_555 E SG CYS 91 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf8 E SG CYS 162 E CYS 162 1_555 E SG CYS 234 E CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 F SG CYS 23 F CYS 23 1_555 F SG CYS 91 F CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf10 F SG CYS 162 F CYS 162 1_555 F SG CYS 234 F CYS 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 B ND2 ASN 21 A ASN 20 1_555 G C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale2 B ND2 ASN 43 A ASN 42 1_555 H C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale3 B ND2 ASN 164 A ASN 163 1_555 I C1 NAG . A NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale4 D ND2 ASN 21 C ASN 20 1_555 K C1 NAG . C NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale5 D ND2 ASN 43 C ASN 42 1_555 L C1 NAG . C NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale6 D ND2 ASN 164 C ASN 163 1_555 M C1 NAG . C NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 389 n n 
C1 O1 NAG sing 390 n n 
C1 O5 NAG sing 391 n n 
C1 H1 NAG sing 392 n n 
C2 C3 NAG sing 393 n n 
C2 N2 NAG sing 394 n n 
C2 H2 NAG sing 395 n n 
C3 C4 NAG sing 396 n n 
C3 O3 NAG sing 397 n n 
C3 H3 NAG sing 398 n n 
C4 C5 NAG sing 399 n n 
C4 O4 NAG sing 400 n n 
C4 H4 NAG sing 401 n n 
C5 C6 NAG sing 402 n n 
C5 O5 NAG sing 403 n n 
C5 H5 NAG sing 404 n n 
C6 O6 NAG sing 405 n n 
C6 H61 NAG sing 406 n n 
C6 H62 NAG sing 407 n n 
C7 C8 NAG sing 408 n n 
C7 N2 NAG sing 409 n n 
C7 O7 NAG doub 410 n n 
C8 H81 NAG sing 411 n n 
C8 H82 NAG sing 412 n n 
C8 H83 NAG sing 413 n n 
N2 HN2 NAG sing 414 n n 
O1 HO1 NAG sing 415 n n 
O3 HO3 NAG sing 416 n n 
O4 HO4 NAG sing 417 n n 
O6 HO6 NAG sing 418 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4MNG 
_atom_sites.fract_transf_matrix[1][1]    0.00436 
_atom_sites.fract_transf_matrix[1][2]    0.002518 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005035 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018995 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAG A 1 301 301 NAG NAG . 
H 4 NAG A 1 302 302 NAG NAG . 
I 4 NAG A 1 303 303 NAG NAG . 
J 5 CIS A 1 304 304 CIS CIS . 
K 4 NAG C 1 301 301 NAG NAG . 
L 4 NAG C 1 302 302 NAG NAG . 
M 4 NAG C 1 303 303 NAG NAG . 
N 5 CIS C 1 304 304 CIS CIS . 
O 6 HOH A 1 401 401 HOH HOH . 
O 6 HOH A 2 402 402 HOH HOH . 
O 6 HOH A 3 403 403 HOH HOH . 
O 6 HOH A 4 404 404 HOH HOH . 
O 6 HOH A 5 405 405 HOH HOH . 
O 6 HOH A 6 406 406 HOH HOH . 
O 6 HOH A 7 407 407 HOH HOH . 
P 6 HOH C 1 401 401 HOH HOH . 
P 6 HOH C 2 402 402 HOH HOH . 
P 6 HOH C 3 403 403 HOH HOH . 
P 6 HOH C 4 404 404 HOH HOH . 
Q 6 HOH E 1 301 301 HOH HOH . 
Q 6 HOH E 2 302 302 HOH HOH . 
R 6 HOH F 1 301 301 HOH HOH . 
R 6 HOH F 2 302 302 HOH HOH . 
R 6 HOH F 3 303 303 HOH HOH . 
R 6 HOH F 4 304 304 HOH HOH . 
R 6 HOH F 5 305 305 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . M 4 -10.607 28.442 29.829 1 119.6 ? C1 NAG 303 C 1 
HETATM 2 C C2 NAG . . . M 4 -11.448 28.563 28.565 1 110.2 ? C2 NAG 303 C 1 
HETATM 3 C C3 NAG . . . M 4 -11.972 27.189 28.144 1 106.97 ? C3 NAG 303 C 1 
HETATM 4 C C4 NAG . . . M 4 -10.855 26.151 28.114 1 104.07 ? C4 NAG 303 C 1 
HETATM 5 C C5 NAG . . . M 4 -10.01 26.202 29.385 1 117.88 ? C5 NAG 303 C 1 
HETATM 6 C C6 NAG . . . M 4 -8.78 25.328 29.312 1 95.67 ? C6 NAG 303 C 1 
HETATM 7 C C7 NAG . . . M 4 -12.5 30.782 28.42 1 82.7 ? C7 NAG 303 C 1 
HETATM 8 C C8 NAG . . . M 4 -13.733 31.588 28.705 1 48.86 ? C8 NAG 303 C 1 
HETATM 9 N N2 NAG . . . M 4 -12.551 29.49 28.764 1 104.56 ? N2 NAG 303 C 1 
HETATM 10 O O3 NAG . . . M 4 -12.542 27.297 26.845 1 110.51 ? O3 NAG 303 C 1 
HETATM 11 O O4 NAG . . . M 4 -11.425 24.852 28.007 1 83.44 ? O4 NAG 303 C 1 
HETATM 12 O O5 NAG . . . M 4 -9.551 27.541 29.609 1 116.22 ? O5 NAG 303 C 1 
HETATM 13 O O6 NAG . . . M 4 -7.93 25.526 30.434 1 48.06 ? O6 NAG 303 C 1 
HETATM 14 O O7 NAG . . . M 4 -11.505 31.279 27.901 1 76.18 ? O7 NAG 303 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    120 
_model_server_stats.query_time_ms           471 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#