data_4MNW
#
_model_server_result.job_id            pCIbUEO9os5Z_JEgfRFfHQ 
_model_server_result.datetime_utc      '2024-12-01 18:11:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mnw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":307}' 
#
_entry.id    4MNW 
#
_exptl.entry_id    4MNW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MNW 
_cell.length_a            52.57 
_cell.length_b            53.96 
_cell.length_c            80.17 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MNW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 31 A CYS 42 1_555 A SG CYS 47 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf2 A SG CYS 39 A CYS 50 1_555 A SG CYS 110 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 135 A CYS 136 1_555 A SG CYS 204 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 A SG CYS 167 A CYS 168 1_555 A SG CYS 183 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf5 A SG CYS 194 A CYS 191 1_555 A SG CYS 222 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
covale ? covale1 B SG CYS 2 B CYS 2 1_555 K C8 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? 
covale ? covale2 B SG CYS 7 B CYS 7 1_555 K C9 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? 
covale ? covale3 B SG CYS 12 B CYS 12 1_555 K C7 ZBR . B ZBR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? 
covale ? covale4 B C ASN 13 B ASN 13 1_555 B N NH2 14 B NH2 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 sing 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     4MNW 
_atom_sites.fract_transf_matrix[1][1]    0.019022 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018532 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012474 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 301 1 SO4 SO4 . 
D 3 SO4 A 1 302 2 SO4 SO4 . 
E 4 GOL A 1 303 1 GOL GOL . 
F 4 GOL A 1 304 6 GOL GOL . 
G 4 GOL A 1 305 8 GOL GOL . 
H 4 GOL A 1 306 10 GOL GOL . 
I 4 GOL A 1 307 11 GOL GOL . 
J 5 ACT A 1 308 1 ACT ACT . 
K 6 ZBR B 1 101 15 ZBR ZBR . 
L 7 HOH A 1 401 1 HOH HOH . 
L 7 HOH A 2 402 2 HOH HOH . 
L 7 HOH A 3 403 3 HOH HOH . 
L 7 HOH A 4 404 4 HOH HOH . 
L 7 HOH A 5 405 5 HOH HOH . 
L 7 HOH A 6 406 6 HOH HOH . 
L 7 HOH A 7 407 7 HOH HOH . 
L 7 HOH A 8 408 9 HOH HOH . 
L 7 HOH A 9 409 11 HOH HOH . 
L 7 HOH A 10 410 12 HOH HOH . 
L 7 HOH A 11 411 14 HOH HOH . 
L 7 HOH A 12 412 15 HOH HOH . 
L 7 HOH A 13 413 16 HOH HOH . 
L 7 HOH A 14 414 17 HOH HOH . 
L 7 HOH A 15 415 18 HOH HOH . 
L 7 HOH A 16 416 19 HOH HOH . 
L 7 HOH A 17 417 20 HOH HOH . 
L 7 HOH A 18 418 21 HOH HOH . 
L 7 HOH A 19 419 22 HOH HOH . 
L 7 HOH A 20 420 23 HOH HOH . 
L 7 HOH A 21 421 24 HOH HOH . 
L 7 HOH A 22 422 25 HOH HOH . 
L 7 HOH A 23 423 26 HOH HOH . 
L 7 HOH A 24 424 27 HOH HOH . 
L 7 HOH A 25 425 28 HOH HOH . 
L 7 HOH A 26 426 29 HOH HOH . 
L 7 HOH A 27 427 30 HOH HOH . 
L 7 HOH A 28 428 31 HOH HOH . 
L 7 HOH A 29 429 33 HOH HOH . 
L 7 HOH A 30 430 34 HOH HOH . 
L 7 HOH A 31 431 35 HOH HOH . 
L 7 HOH A 32 432 36 HOH HOH . 
L 7 HOH A 33 433 37 HOH HOH . 
L 7 HOH A 34 434 38 HOH HOH . 
L 7 HOH A 35 435 39 HOH HOH . 
L 7 HOH A 36 436 40 HOH HOH . 
L 7 HOH A 37 437 41 HOH HOH . 
L 7 HOH A 38 438 42 HOH HOH . 
L 7 HOH A 39 439 43 HOH HOH . 
L 7 HOH A 40 440 44 HOH HOH . 
L 7 HOH A 41 441 45 HOH HOH . 
L 7 HOH A 42 442 46 HOH HOH . 
L 7 HOH A 43 443 47 HOH HOH . 
L 7 HOH A 44 444 48 HOH HOH . 
L 7 HOH A 45 445 49 HOH HOH . 
L 7 HOH A 46 446 50 HOH HOH . 
L 7 HOH A 47 447 51 HOH HOH . 
L 7 HOH A 48 448 52 HOH HOH . 
L 7 HOH A 49 449 53 HOH HOH . 
L 7 HOH A 50 450 54 HOH HOH . 
L 7 HOH A 51 451 55 HOH HOH . 
L 7 HOH A 52 452 56 HOH HOH . 
L 7 HOH A 53 453 57 HOH HOH . 
L 7 HOH A 54 454 58 HOH HOH . 
L 7 HOH A 55 455 60 HOH HOH . 
L 7 HOH A 56 456 61 HOH HOH . 
L 7 HOH A 57 457 62 HOH HOH . 
L 7 HOH A 58 458 63 HOH HOH . 
L 7 HOH A 59 459 64 HOH HOH . 
L 7 HOH A 60 460 65 HOH HOH . 
L 7 HOH A 61 461 66 HOH HOH . 
L 7 HOH A 62 462 67 HOH HOH . 
L 7 HOH A 63 463 68 HOH HOH . 
L 7 HOH A 64 464 69 HOH HOH . 
L 7 HOH A 65 465 70 HOH HOH . 
L 7 HOH A 66 466 71 HOH HOH . 
L 7 HOH A 67 467 72 HOH HOH . 
L 7 HOH A 68 468 73 HOH HOH . 
L 7 HOH A 69 469 74 HOH HOH . 
L 7 HOH A 70 470 75 HOH HOH . 
L 7 HOH A 71 471 76 HOH HOH . 
L 7 HOH A 72 472 77 HOH HOH . 
L 7 HOH A 73 473 78 HOH HOH . 
L 7 HOH A 74 474 79 HOH HOH . 
L 7 HOH A 75 475 80 HOH HOH . 
L 7 HOH A 76 476 83 HOH HOH . 
L 7 HOH A 77 477 84 HOH HOH . 
L 7 HOH A 78 478 85 HOH HOH . 
L 7 HOH A 79 479 86 HOH HOH . 
L 7 HOH A 80 480 87 HOH HOH . 
L 7 HOH A 81 481 88 HOH HOH . 
L 7 HOH A 82 482 89 HOH HOH . 
L 7 HOH A 83 483 90 HOH HOH . 
L 7 HOH A 84 484 91 HOH HOH . 
L 7 HOH A 85 485 93 HOH HOH . 
L 7 HOH A 86 486 94 HOH HOH . 
L 7 HOH A 87 487 95 HOH HOH . 
L 7 HOH A 88 488 96 HOH HOH . 
L 7 HOH A 89 489 98 HOH HOH . 
L 7 HOH A 90 490 99 HOH HOH . 
L 7 HOH A 91 491 100 HOH HOH . 
L 7 HOH A 92 492 101 HOH HOH . 
L 7 HOH A 93 493 102 HOH HOH . 
L 7 HOH A 94 494 104 HOH HOH . 
L 7 HOH A 95 495 105 HOH HOH . 
L 7 HOH A 96 496 106 HOH HOH . 
L 7 HOH A 97 497 107 HOH HOH . 
L 7 HOH A 98 498 108 HOH HOH . 
L 7 HOH A 99 499 110 HOH HOH . 
L 7 HOH A 100 500 111 HOH HOH . 
L 7 HOH A 101 501 112 HOH HOH . 
L 7 HOH A 102 502 113 HOH HOH . 
L 7 HOH A 103 503 114 HOH HOH . 
L 7 HOH A 104 504 115 HOH HOH . 
L 7 HOH A 105 505 116 HOH HOH . 
L 7 HOH A 106 506 117 HOH HOH . 
L 7 HOH A 107 507 118 HOH HOH . 
L 7 HOH A 108 508 119 HOH HOH . 
L 7 HOH A 109 509 120 HOH HOH . 
L 7 HOH A 110 510 121 HOH HOH . 
L 7 HOH A 111 511 122 HOH HOH . 
L 7 HOH A 112 512 123 HOH HOH . 
L 7 HOH A 113 513 124 HOH HOH . 
L 7 HOH A 114 514 125 HOH HOH . 
L 7 HOH A 115 515 126 HOH HOH . 
L 7 HOH A 116 516 127 HOH HOH . 
L 7 HOH A 117 517 128 HOH HOH . 
L 7 HOH A 118 518 129 HOH HOH . 
L 7 HOH A 119 519 130 HOH HOH . 
L 7 HOH A 120 520 131 HOH HOH . 
L 7 HOH A 121 521 132 HOH HOH . 
L 7 HOH A 122 522 133 HOH HOH . 
L 7 HOH A 123 523 134 HOH HOH . 
L 7 HOH A 124 524 135 HOH HOH . 
L 7 HOH A 125 525 137 HOH HOH . 
L 7 HOH A 126 526 138 HOH HOH . 
L 7 HOH A 127 527 139 HOH HOH . 
L 7 HOH A 128 528 140 HOH HOH . 
L 7 HOH A 129 529 141 HOH HOH . 
L 7 HOH A 130 530 142 HOH HOH . 
L 7 HOH A 131 531 143 HOH HOH . 
L 7 HOH A 132 532 144 HOH HOH . 
L 7 HOH A 133 533 145 HOH HOH . 
L 7 HOH A 134 534 146 HOH HOH . 
L 7 HOH A 135 535 147 HOH HOH . 
L 7 HOH A 136 536 148 HOH HOH . 
L 7 HOH A 137 537 149 HOH HOH . 
L 7 HOH A 138 538 150 HOH HOH . 
L 7 HOH A 139 539 151 HOH HOH . 
L 7 HOH A 140 540 152 HOH HOH . 
L 7 HOH A 141 541 153 HOH HOH . 
L 7 HOH A 142 542 154 HOH HOH . 
L 7 HOH A 143 543 155 HOH HOH . 
L 7 HOH A 144 544 156 HOH HOH . 
L 7 HOH A 145 545 158 HOH HOH . 
L 7 HOH A 146 546 163 HOH HOH . 
L 7 HOH A 147 547 164 HOH HOH . 
L 7 HOH A 148 548 165 HOH HOH . 
L 7 HOH A 149 549 167 HOH HOH . 
L 7 HOH A 150 550 168 HOH HOH . 
L 7 HOH A 151 551 170 HOH HOH . 
L 7 HOH A 152 552 171 HOH HOH . 
L 7 HOH A 153 553 172 HOH HOH . 
L 7 HOH A 154 554 173 HOH HOH . 
L 7 HOH A 155 555 174 HOH HOH . 
L 7 HOH A 156 556 175 HOH HOH . 
L 7 HOH A 157 557 176 HOH HOH . 
L 7 HOH A 158 558 182 HOH HOH . 
L 7 HOH A 159 559 183 HOH HOH . 
L 7 HOH A 160 560 184 HOH HOH . 
M 7 HOH B 1 201 10 HOH HOH . 
M 7 HOH B 2 202 13 HOH HOH . 
M 7 HOH B 3 203 32 HOH HOH . 
M 7 HOH B 4 204 59 HOH HOH . 
M 7 HOH B 5 205 92 HOH HOH . 
M 7 HOH B 6 206 97 HOH HOH . 
M 7 HOH B 7 207 109 HOH HOH . 
M 7 HOH B 8 208 136 HOH HOH . 
M 7 HOH B 9 209 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 4 37.528 2.253 -23.332 0.7 20.68 ? C1 GOL 307 A 1 
HETATM 2 O O1 GOL . . . I 4 37.32 0.844 -23.291 0.7 23.17 ? O1 GOL 307 A 1 
HETATM 3 C C2 GOL . . . I 4 38.318 2.707 -22.115 0.7 20.76 ? C2 GOL 307 A 1 
HETATM 4 O O2 GOL . . . I 4 38.372 4.12 -21.995 0.7 23.99 ? O2 GOL 307 A 1 
HETATM 5 C C3 GOL . . . I 4 39.744 2.223 -22.087 0.7 20.92 ? C3 GOL 307 A 1 
HETATM 6 O O3 GOL . . . I 4 40.294 2.619 -20.833 0.7 21.79 ? O3 GOL 307 A 1 
#
_model_server_stats.io_time_ms              122 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#