data_4MQ2
#
_model_server_result.job_id            EaDwy5G7I7UyHuah3p7gaw 
_model_server_result.datetime_utc      '2024-12-02 17:36:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mq2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"R","auth_seq_id":501}' 
#
_entry.id    4MQ2 
#
_exptl.entry_id    4MQ2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              388.762 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'methyl 4-chloro-3-{[(2-methoxy-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl)carbonyl]amino}benzoate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.01 
_cell.angle_gamma         90 
_cell.entry_id            4MQ2 
_cell.length_a            264.097 
_cell.length_b            65.161 
_cell.length_c            138.426 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MQ2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,T 1 1 
B,J,K,L,M,N,O,U 2 1 
C,P,Q,V 3 1 
D,R,S,W 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 J N N 
? 2 P N N 
? 2 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLN 196 A GLN 320 1_555 A N PTR 197 A PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale2 A C PTR 197 A PTR 321 1_555 A N ILE 198 A ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale3 B C GLN 196 B GLN 320 1_555 B N PTR 197 B PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale4 B C PTR 197 B PTR 321 1_555 B N ILE 198 B ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 C C GLN 196 C GLN 320 1_555 C N PTR 197 C PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale6 C C PTR 197 C PTR 321 1_555 C N ILE 198 C ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 D C GLN 196 D GLN 320 1_555 D N PTR 197 D PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale8 D C PTR 197 D PTR 321 1_555 D N ILE 198 D ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C17 H13 Cl N4 O5' 
_chem_comp.formula_weight    388.762 
_chem_comp.id                2C4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'methyl 4-chloro-3-{[(2-methoxy-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-6-yl)carbonyl]amino}benzoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 C2 2C4 doub 38 n y 
N3 C4 2C4 sing 39 n y 
C2 C1 2C4 sing 40 n y 
C27 O26 2C4 sing 41 n n 
O5 C4 2C4 sing 42 n n 
O5 C6 2C4 sing 43 n n 
C4 N7 2C4 doub 44 n y 
C1 C13 2C4 sing 45 n n 
C1 C8 2C4 doub 46 n y 
O26 C24 2C4 sing 47 n n 
C13 C12 2C4 doub 48 n n 
N7 C8 2C4 sing 49 n y 
O15 C14 2C4 doub 50 n n 
C8 N9 2C4 sing 51 n n 
C24 O25 2C4 doub 52 n n 
C24 C19 2C4 sing 53 n n 
C12 C14 2C4 sing 54 n n 
C12 C10 2C4 sing 55 n n 
C14 N16 2C4 sing 56 n n 
C18 C19 2C4 doub 57 n y 
C18 C17 2C4 sing 58 n y 
N9 C10 2C4 sing 59 n n 
C19 C20 2C4 sing 60 n y 
C10 O11 2C4 doub 61 n n 
N16 C17 2C4 sing 62 n n 
C17 C22 2C4 doub 63 n y 
C20 C21 2C4 doub 64 n y 
C22 C21 2C4 sing 65 n y 
C22 CL2 2C4 sing 66 n n 
C6 H1 2C4 sing 67 n n 
C6 H2 2C4 sing 68 n n 
C6 H3 2C4 sing 69 n n 
C13 H4 2C4 sing 70 n n 
C20 H5 2C4 sing 71 n n 
C21 H6 2C4 sing 72 n n 
N9 H7 2C4 sing 73 n n 
C2 H8 2C4 sing 74 n n 
N16 H9 2C4 sing 75 n n 
C18 H10 2C4 sing 76 n n 
C27 H11 2C4 sing 77 n n 
C27 H12 2C4 sing 78 n n 
C27 H13 2C4 sing 79 n n 
#
_atom_sites.entry_id                     4MQ2 
_atom_sites.fract_transf_matrix[1][1]    0.003786 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001767 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015347 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007972 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 2C4 A 1 501 1 2C4 LIG . 
F 3 1PE A 1 502 2 1PE 1PE . 
G 3 1PE A 1 503 3 1PE 1PE . 
H 4 SO4 A 1 504 11 SO4 SO4 . 
I 4 SO4 A 1 505 12 SO4 SO4 . 
J 2 2C4 B 1 501 1 2C4 LIG . 
K 3 1PE B 1 502 2 1PE 1PE . 
L 3 1PE B 1 503 3 1PE 1PE . 
M 4 SO4 B 1 504 11 SO4 SO4 . 
N 4 SO4 B 1 505 12 SO4 SO4 . 
O 4 SO4 B 1 506 13 SO4 SO4 . 
P 2 2C4 C 1 501 1 2C4 LIG . 
Q 3 1PE C 1 502 2 1PE 1PE . 
R 2 2C4 D 1 501 1 2C4 LIG . 
S 3 1PE D 1 502 2 1PE 1PE . 
T 5 HOH A 1 601 1 HOH HOH . 
T 5 HOH A 2 602 2 HOH HOH . 
T 5 HOH A 3 603 3 HOH HOH . 
T 5 HOH A 4 604 4 HOH HOH . 
T 5 HOH A 5 605 5 HOH HOH . 
T 5 HOH A 6 606 6 HOH HOH . 
T 5 HOH A 7 607 7 HOH HOH . 
T 5 HOH A 8 608 8 HOH HOH . 
T 5 HOH A 9 609 9 HOH HOH . 
T 5 HOH A 10 610 10 HOH HOH . 
T 5 HOH A 11 611 11 HOH HOH . 
T 5 HOH A 12 612 12 HOH HOH . 
T 5 HOH A 13 613 13 HOH HOH . 
T 5 HOH A 14 614 14 HOH HOH . 
T 5 HOH A 15 615 15 HOH HOH . 
T 5 HOH A 16 616 16 HOH HOH . 
T 5 HOH A 17 617 17 HOH HOH . 
T 5 HOH A 18 618 18 HOH HOH . 
T 5 HOH A 19 619 19 HOH HOH . 
T 5 HOH A 20 620 20 HOH HOH . 
T 5 HOH A 21 621 21 HOH HOH . 
T 5 HOH A 22 622 22 HOH HOH . 
T 5 HOH A 23 623 23 HOH HOH . 
T 5 HOH A 24 624 24 HOH HOH . 
T 5 HOH A 25 625 25 HOH HOH . 
T 5 HOH A 26 626 26 HOH HOH . 
T 5 HOH A 27 627 27 HOH HOH . 
T 5 HOH A 28 628 28 HOH HOH . 
T 5 HOH A 29 629 29 HOH HOH . 
T 5 HOH A 30 630 30 HOH HOH . 
T 5 HOH A 31 631 31 HOH HOH . 
T 5 HOH A 32 632 32 HOH HOH . 
T 5 HOH A 33 633 33 HOH HOH . 
T 5 HOH A 34 634 34 HOH HOH . 
T 5 HOH A 35 635 35 HOH HOH . 
T 5 HOH A 36 636 36 HOH HOH . 
T 5 HOH A 37 637 37 HOH HOH . 
T 5 HOH A 38 638 38 HOH HOH . 
T 5 HOH A 39 639 39 HOH HOH . 
T 5 HOH A 40 640 40 HOH HOH . 
T 5 HOH A 41 641 41 HOH HOH . 
T 5 HOH A 42 642 42 HOH HOH . 
T 5 HOH A 43 643 43 HOH HOH . 
T 5 HOH A 44 644 44 HOH HOH . 
T 5 HOH A 45 645 45 HOH HOH . 
T 5 HOH A 46 646 46 HOH HOH . 
T 5 HOH A 47 647 47 HOH HOH . 
T 5 HOH A 48 648 48 HOH HOH . 
T 5 HOH A 49 649 49 HOH HOH . 
T 5 HOH A 50 650 50 HOH HOH . 
T 5 HOH A 51 651 51 HOH HOH . 
T 5 HOH A 52 652 55 HOH HOH . 
T 5 HOH A 53 653 56 HOH HOH . 
U 5 HOH B 1 601 52 HOH HOH . 
U 5 HOH B 2 602 57 HOH HOH . 
U 5 HOH B 3 603 1 HOH HOH . 
U 5 HOH B 4 604 2 HOH HOH . 
U 5 HOH B 5 605 3 HOH HOH . 
U 5 HOH B 6 606 4 HOH HOH . 
U 5 HOH B 7 607 5 HOH HOH . 
U 5 HOH B 8 608 6 HOH HOH . 
U 5 HOH B 9 609 7 HOH HOH . 
U 5 HOH B 10 610 8 HOH HOH . 
U 5 HOH B 11 611 9 HOH HOH . 
U 5 HOH B 12 612 10 HOH HOH . 
U 5 HOH B 13 613 11 HOH HOH . 
U 5 HOH B 14 614 12 HOH HOH . 
U 5 HOH B 15 615 13 HOH HOH . 
U 5 HOH B 16 616 14 HOH HOH . 
U 5 HOH B 17 617 15 HOH HOH . 
U 5 HOH B 18 618 16 HOH HOH . 
U 5 HOH B 19 619 17 HOH HOH . 
U 5 HOH B 20 620 18 HOH HOH . 
U 5 HOH B 21 621 19 HOH HOH . 
U 5 HOH B 22 622 20 HOH HOH . 
U 5 HOH B 23 623 21 HOH HOH . 
U 5 HOH B 24 624 22 HOH HOH . 
U 5 HOH B 25 625 23 HOH HOH . 
U 5 HOH B 26 626 24 HOH HOH . 
U 5 HOH B 27 627 25 HOH HOH . 
U 5 HOH B 28 628 26 HOH HOH . 
U 5 HOH B 29 629 27 HOH HOH . 
U 5 HOH B 30 630 28 HOH HOH . 
U 5 HOH B 31 631 29 HOH HOH . 
U 5 HOH B 32 632 30 HOH HOH . 
U 5 HOH B 33 633 14 HOH HOH . 
V 5 HOH C 1 601 53 HOH HOH . 
V 5 HOH C 2 602 58 HOH HOH . 
V 5 HOH C 3 603 1 HOH HOH . 
V 5 HOH C 4 604 2 HOH HOH . 
V 5 HOH C 5 605 3 HOH HOH . 
V 5 HOH C 6 606 4 HOH HOH . 
V 5 HOH C 7 607 5 HOH HOH . 
V 5 HOH C 8 608 6 HOH HOH . 
V 5 HOH C 9 609 7 HOH HOH . 
V 5 HOH C 10 610 8 HOH HOH . 
V 5 HOH C 11 611 9 HOH HOH . 
V 5 HOH C 12 612 10 HOH HOH . 
V 5 HOH C 13 613 11 HOH HOH . 
V 5 HOH C 14 614 12 HOH HOH . 
V 5 HOH C 15 615 13 HOH HOH . 
V 5 HOH C 16 616 14 HOH HOH . 
W 5 HOH D 1 601 54 HOH HOH . 
W 5 HOH D 2 602 59 HOH HOH . 
W 5 HOH D 3 603 1 HOH HOH . 
W 5 HOH D 4 604 2 HOH HOH . 
W 5 HOH D 5 605 3 HOH HOH . 
W 5 HOH D 6 606 4 HOH HOH . 
W 5 HOH D 7 607 5 HOH HOH . 
W 5 HOH D 8 608 6 HOH HOH . 
W 5 HOH D 9 609 7 HOH HOH . 
W 5 HOH D 10 610 8 HOH HOH . 
W 5 HOH D 11 611 9 HOH HOH . 
W 5 HOH D 12 612 10 HOH HOH . 
W 5 HOH D 13 613 11 HOH HOH . 
W 5 HOH D 14 614 12 HOH HOH . 
W 5 HOH D 15 615 13 HOH HOH . 
W 5 HOH D 16 616 15 HOH HOH . 
W 5 HOH D 17 617 16 HOH HOH . 
W 5 HOH D 18 618 17 HOH HOH . 
W 5 HOH D 19 619 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N3 2C4 . . . R 2 -21.807 -8.897 -38.164 1 48.34 ? N3 2C4 501 D 1 
HETATM 2 C C4 2C4 . . . R 2 -21.639 -7.871 -39.008 1 47.96 ? C4 2C4 501 D 1 
HETATM 3 C C6 2C4 . . . R 2 -20.616 -5.821 -39.411 1 44.92 ? C6 2C4 501 D 1 
HETATM 4 C C8 2C4 . . . R 2 -23.78 -8.116 -39.887 1 47.79 ? C8 2C4 501 D 1 
HETATM 5 C C10 2C4 . . . R 2 -25.997 -8.374 -40.802 1 53.05 ? C10 2C4 501 D 1 
HETATM 6 C C13 2C4 . . . R 2 -25.243 -9.86 -39.064 1 54.2 ? C13 2C4 501 D 1 
HETATM 7 C C17 2C4 . . . R 2 -29.792 -10.25 -40.694 1 44.68 ? C17 2C4 501 D 1 
HETATM 8 C C20 2C4 . . . R 2 -32.53 -10.727 -40.65 1 43.93 ? C20 2C4 501 D 1 
HETATM 9 C C21 2C4 . . . R 2 -31.984 -9.918 -41.633 1 44.17 ? C21 2C4 501 D 1 
HETATM 10 C C22 2C4 . . . R 2 -30.621 -9.662 -41.652 1 46.56 ? C22 2C4 501 D 1 
HETATM 11 C C24 2C4 . . . R 2 -32.405 -12.161 -38.687 1 44.8 ? C24 2C4 501 D 1 
HETATM 12 O O11 2C4 . . . R 2 -26.839 -7.975 -41.598 1 53.86 ? O11 2C4 501 D 1 
HETATM 13 N N9 2C4 . . . R 2 -24.746 -7.69 -40.773 1 47.96 ? N9 2C4 501 D 1 
HETATM 14 N N7 2C4 . . . R 2 -22.619 -7.496 -39.845 1 46.95 ? N7 2C4 501 D 1 
HETATM 15 O O5 2C4 . . . R 2 -20.461 -7.195 -39.01 1 46.2 ? O5 2C4 501 D 1 
HETATM 16 C C2 2C4 . . . R 2 -23.022 -9.579 -38.16 1 49.3 ? C2 2C4 501 D 1 
HETATM 17 C C1 2C4 . . . R 2 -24.023 -9.181 -39.029 1 51.67 ? C1 2C4 501 D 1 
HETATM 18 C C12 2C4 . . . R 2 -26.256 -9.495 -39.971 1 53.4 ? C12 2C4 501 D 1 
HETATM 19 C C14 2C4 . . . R 2 -27.505 -10.173 -39.888 1 48.93 ? C14 2C4 501 D 1 
HETATM 20 O O15 2C4 . . . R 2 -27.679 -10.891 -38.903 1 46.14 ? O15 2C4 501 D 1 
HETATM 21 N N16 2C4 . . . R 2 -28.489 -9.856 -40.797 1 43.77 ? N16 2C4 501 D 1 
HETATM 22 C C18 2C4 . . . R 2 -30.403 -11.05 -39.687 1 43.79 ? C18 2C4 501 D 1 
HETATM 23 CL CL2 2C4 . . . R 2 -29.958 -8.613 -42.934 1 45.81 ? CL2 2C4 501 D 1 
HETATM 24 C C19 2C4 . . . R 2 -31.775 -11.3 -39.636 1 41.34 ? C19 2C4 501 D 1 
HETATM 25 O O25 2C4 . . . R 2 -33.626 -12.382 -38.695 1 41.29 ? O25 2C4 501 D 1 
HETATM 26 O O26 2C4 . . . R 2 -31.593 -12.893 -37.869 1 46.56 ? O26 2C4 501 D 1 
HETATM 27 C C27 2C4 . . . R 2 -32.037 -12.714 -36.505 1 48.61 ? C27 2C4 501 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#