data_4MQ4 # _model_server_result.job_id 97I-e5PYnZQmoC9SDrXJUQ _model_server_result.datetime_utc '2024-11-15 23:54:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4MQ4 # _exptl.entry_id 4MQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MQ4 _cell.length_a 94.15 _cell.length_b 94.15 _cell.length_c 188.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 48 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 48 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 139 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 139 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.585 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 402 n n C C2 TRS sing 403 n n C C3 TRS sing 404 n n C N TRS sing 405 n n C1 O1 TRS sing 406 n n C1 H11 TRS sing 407 n n C1 H12 TRS sing 408 n n C2 O2 TRS sing 409 n n C2 H21 TRS sing 410 n n C2 H22 TRS sing 411 n n C3 O3 TRS sing 412 n n C3 H31 TRS sing 413 n n C3 H32 TRS sing 414 n n N HN1 TRS sing 415 n n N HN2 TRS sing 416 n n N HN3 TRS sing 417 n n O1 HO1 TRS sing 418 n n O2 HO2 TRS sing 419 n n O3 HO3 TRS sing 420 n n # _atom_sites.entry_id 4MQ4 _atom_sites.fract_transf_matrix[1][1] 0.010621 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010621 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2D5 A 1 301 1 2D5 2D5 . D 3 TRS A 1 302 2 TRS TRS . E 2 2D5 B 1 301 3 2D5 2D5 . F 3 TRS B 1 302 1 TRS TRS . G 4 HOH A 1 401 1 HOH HOH . G 4 HOH A 2 402 2 HOH HOH . G 4 HOH A 3 403 3 HOH HOH . G 4 HOH A 4 404 4 HOH HOH . G 4 HOH A 5 405 5 HOH HOH . G 4 HOH A 6 406 8 HOH HOH . G 4 HOH A 7 407 9 HOH HOH . G 4 HOH A 8 408 11 HOH HOH . G 4 HOH A 9 409 12 HOH HOH . G 4 HOH A 10 410 13 HOH HOH . G 4 HOH A 11 411 15 HOH HOH . G 4 HOH A 12 412 18 HOH HOH . G 4 HOH A 13 413 19 HOH HOH . G 4 HOH A 14 414 21 HOH HOH . G 4 HOH A 15 415 24 HOH HOH . G 4 HOH A 16 416 27 HOH HOH . G 4 HOH A 17 417 30 HOH HOH . G 4 HOH A 18 418 31 HOH HOH . G 4 HOH A 19 419 33 HOH HOH . G 4 HOH A 20 420 34 HOH HOH . G 4 HOH A 21 421 36 HOH HOH . G 4 HOH A 22 422 38 HOH HOH . G 4 HOH A 23 423 39 HOH HOH . G 4 HOH A 24 424 40 HOH HOH . G 4 HOH A 25 425 41 HOH HOH . G 4 HOH A 26 426 42 HOH HOH . G 4 HOH A 27 427 43 HOH HOH . G 4 HOH A 28 428 44 HOH HOH . G 4 HOH A 29 429 45 HOH HOH . G 4 HOH A 30 430 46 HOH HOH . G 4 HOH A 31 431 52 HOH HOH . G 4 HOH A 32 432 54 HOH HOH . G 4 HOH A 33 433 56 HOH HOH . G 4 HOH A 34 434 58 HOH HOH . G 4 HOH A 35 435 60 HOH HOH . G 4 HOH A 36 436 61 HOH HOH . G 4 HOH A 37 437 65 HOH HOH . G 4 HOH A 38 438 69 HOH HOH . G 4 HOH A 39 439 71 HOH HOH . G 4 HOH A 40 440 72 HOH HOH . G 4 HOH A 41 441 74 HOH HOH . G 4 HOH A 42 442 76 HOH HOH . G 4 HOH A 43 443 78 HOH HOH . G 4 HOH A 44 444 80 HOH HOH . G 4 HOH A 45 445 81 HOH HOH . G 4 HOH A 46 446 84 HOH HOH . G 4 HOH A 47 447 85 HOH HOH . G 4 HOH A 48 448 88 HOH HOH . G 4 HOH A 49 449 89 HOH HOH . G 4 HOH A 50 450 93 HOH HOH . G 4 HOH A 51 451 94 HOH HOH . G 4 HOH A 52 452 95 HOH HOH . G 4 HOH A 53 453 96 HOH HOH . G 4 HOH A 54 454 97 HOH HOH . G 4 HOH A 55 455 99 HOH HOH . G 4 HOH A 56 456 101 HOH HOH . G 4 HOH A 57 457 102 HOH HOH . G 4 HOH A 58 458 103 HOH HOH . G 4 HOH A 59 459 104 HOH HOH . G 4 HOH A 60 460 105 HOH HOH . G 4 HOH A 61 461 106 HOH HOH . G 4 HOH A 62 462 108 HOH HOH . G 4 HOH A 63 463 109 HOH HOH . G 4 HOH A 64 464 110 HOH HOH . G 4 HOH A 65 465 112 HOH HOH . G 4 HOH A 66 466 113 HOH HOH . G 4 HOH A 67 467 114 HOH HOH . G 4 HOH A 68 468 116 HOH HOH . G 4 HOH A 69 469 117 HOH HOH . G 4 HOH A 70 470 118 HOH HOH . G 4 HOH A 71 471 119 HOH HOH . G 4 HOH A 72 472 125 HOH HOH . G 4 HOH A 73 473 127 HOH HOH . G 4 HOH A 74 474 128 HOH HOH . G 4 HOH A 75 475 131 HOH HOH . G 4 HOH A 76 476 132 HOH HOH . G 4 HOH A 77 477 133 HOH HOH . G 4 HOH A 78 478 134 HOH HOH . G 4 HOH A 79 479 137 HOH HOH . G 4 HOH A 80 480 140 HOH HOH . G 4 HOH A 81 481 141 HOH HOH . G 4 HOH A 82 482 142 HOH HOH . G 4 HOH A 83 483 143 HOH HOH . G 4 HOH A 84 484 144 HOH HOH . G 4 HOH A 85 485 146 HOH HOH . G 4 HOH A 86 486 147 HOH HOH . G 4 HOH A 87 487 148 HOH HOH . G 4 HOH A 88 488 150 HOH HOH . G 4 HOH A 89 489 151 HOH HOH . G 4 HOH A 90 490 153 HOH HOH . G 4 HOH A 91 491 156 HOH HOH . G 4 HOH A 92 492 161 HOH HOH . G 4 HOH A 93 493 165 HOH HOH . G 4 HOH A 94 494 167 HOH HOH . G 4 HOH A 95 495 171 HOH HOH . G 4 HOH A 96 496 174 HOH HOH . G 4 HOH A 97 497 175 HOH HOH . G 4 HOH A 98 498 176 HOH HOH . G 4 HOH A 99 499 177 HOH HOH . G 4 HOH A 100 500 178 HOH HOH . G 4 HOH A 101 501 180 HOH HOH . H 4 HOH B 1 401 6 HOH HOH . H 4 HOH B 2 402 7 HOH HOH . H 4 HOH B 3 403 10 HOH HOH . H 4 HOH B 4 404 14 HOH HOH . H 4 HOH B 5 405 16 HOH HOH . H 4 HOH B 6 406 17 HOH HOH . H 4 HOH B 7 407 20 HOH HOH . H 4 HOH B 8 408 22 HOH HOH . H 4 HOH B 9 409 23 HOH HOH . H 4 HOH B 10 410 25 HOH HOH . H 4 HOH B 11 411 26 HOH HOH . H 4 HOH B 12 412 28 HOH HOH . H 4 HOH B 13 413 29 HOH HOH . H 4 HOH B 14 414 32 HOH HOH . H 4 HOH B 15 415 35 HOH HOH . H 4 HOH B 16 416 37 HOH HOH . H 4 HOH B 17 417 47 HOH HOH . H 4 HOH B 18 418 48 HOH HOH . H 4 HOH B 19 419 49 HOH HOH . H 4 HOH B 20 420 50 HOH HOH . H 4 HOH B 21 421 51 HOH HOH . H 4 HOH B 22 422 53 HOH HOH . H 4 HOH B 23 423 55 HOH HOH . H 4 HOH B 24 424 57 HOH HOH . H 4 HOH B 25 425 59 HOH HOH . H 4 HOH B 26 426 62 HOH HOH . H 4 HOH B 27 427 63 HOH HOH . H 4 HOH B 28 428 64 HOH HOH . H 4 HOH B 29 429 66 HOH HOH . H 4 HOH B 30 430 67 HOH HOH . H 4 HOH B 31 431 68 HOH HOH . H 4 HOH B 32 432 70 HOH HOH . H 4 HOH B 33 433 73 HOH HOH . H 4 HOH B 34 434 75 HOH HOH . H 4 HOH B 35 435 77 HOH HOH . H 4 HOH B 36 436 79 HOH HOH . H 4 HOH B 37 437 82 HOH HOH . H 4 HOH B 38 438 83 HOH HOH . H 4 HOH B 39 439 86 HOH HOH . H 4 HOH B 40 440 87 HOH HOH . H 4 HOH B 41 441 90 HOH HOH . H 4 HOH B 42 442 91 HOH HOH . H 4 HOH B 43 443 92 HOH HOH . H 4 HOH B 44 444 98 HOH HOH . H 4 HOH B 45 445 100 HOH HOH . H 4 HOH B 46 446 107 HOH HOH . H 4 HOH B 47 447 111 HOH HOH . H 4 HOH B 48 448 115 HOH HOH . H 4 HOH B 49 449 120 HOH HOH . H 4 HOH B 50 450 121 HOH HOH . H 4 HOH B 51 451 122 HOH HOH . H 4 HOH B 52 452 123 HOH HOH . H 4 HOH B 53 453 124 HOH HOH . H 4 HOH B 54 454 126 HOH HOH . H 4 HOH B 55 455 129 HOH HOH . H 4 HOH B 56 456 130 HOH HOH . H 4 HOH B 57 457 135 HOH HOH . H 4 HOH B 58 458 136 HOH HOH . H 4 HOH B 59 459 138 HOH HOH . H 4 HOH B 60 460 139 HOH HOH . H 4 HOH B 61 461 145 HOH HOH . H 4 HOH B 62 462 149 HOH HOH . H 4 HOH B 63 463 152 HOH HOH . H 4 HOH B 64 464 154 HOH HOH . H 4 HOH B 65 465 155 HOH HOH . H 4 HOH B 66 466 157 HOH HOH . H 4 HOH B 67 467 158 HOH HOH . H 4 HOH B 68 468 159 HOH HOH . H 4 HOH B 69 469 160 HOH HOH . H 4 HOH B 70 470 162 HOH HOH . H 4 HOH B 71 471 163 HOH HOH . H 4 HOH B 72 472 164 HOH HOH . H 4 HOH B 73 473 166 HOH HOH . H 4 HOH B 74 474 168 HOH HOH . H 4 HOH B 75 475 169 HOH HOH . H 4 HOH B 76 476 170 HOH HOH . H 4 HOH B 77 477 172 HOH HOH . H 4 HOH B 78 478 173 HOH HOH . H 4 HOH B 79 479 179 HOH HOH . H 4 HOH B 80 480 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 3 5.704 75.652 27.228 1 58.89 ? C TRS 302 A 1 HETATM 2 C C1 TRS . . . D 3 5.819 74.181 26.973 1 69.26 ? C1 TRS 302 A 1 HETATM 3 C C2 TRS . . . D 3 4.259 76.007 27.208 1 56.11 ? C2 TRS 302 A 1 HETATM 4 C C3 TRS . . . D 3 6.445 76.29 26.101 1 47.66 ? C3 TRS 302 A 1 HETATM 5 N N TRS . . . D 3 6.369 76.168 28.46 1 61.08 1 N TRS 302 A 1 HETATM 6 O O1 TRS . . . D 3 5.92 73.885 25.647 1 40.42 ? O1 TRS 302 A 1 HETATM 7 O O2 TRS . . . D 3 3.302 75.012 27.552 1 69.45 ? O2 TRS 302 A 1 HETATM 8 O O3 TRS . . . D 3 7.35 75.355 25.514 1 39.98 ? O3 TRS 302 A 1 HETATM 9 H H11 TRS . . . D 3 4.944 73.678 27.386 1 83.11 ? H11 TRS 302 A 1 HETATM 10 H H12 TRS . . . D 3 6.696 73.796 27.493 1 83.11 ? H12 TRS 302 A 1 HETATM 11 H H21 TRS . . . D 3 4.02 76.366 26.208 1 67.33 ? H21 TRS 302 A 1 HETATM 12 H H22 TRS . . . D 3 4.116 76.852 27.881 1 67.33 ? H22 TRS 302 A 1 HETATM 13 H H31 TRS . . . D 3 5.737 76.637 25.347 1 57.19 ? H31 TRS 302 A 1 HETATM 14 H H32 TRS . . . D 3 6.998 77.154 26.468 1 57.19 ? H32 TRS 302 A 1 HETATM 15 H HN1 TRS . . . D 3 6.335 77.178 28.554 1 73.29 1 HN1 TRS 302 A 1 HETATM 16 H HN2 TRS . . . D 3 7.288 75.77 28.628 1 73.29 1 HN2 TRS 302 A 1 HETATM 17 H HN3 TRS . . . D 3 5.8 75.823 29.219 1 73.29 1 HN3 TRS 302 A 1 HETATM 18 H HO1 TRS . . . D 3 5.896 74.714 25.124 1 48.5 ? HO1 TRS 302 A 1 HETATM 19 H HO2 TRS . . . D 3 3.765 74.176 27.769 1 83.34 ? HO2 TRS 302 A 1 HETATM 20 H HO3 TRS . . . D 3 7.284 74.497 25.984 1 47.98 ? HO3 TRS 302 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #