data_4MQH
#
_model_server_result.job_id            PzxLbvvm1umXZplg4OW81A 
_model_server_result.datetime_utc      '2024-11-22 04:40:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mqh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    4MQH 
#
_exptl.entry_id    4MQH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MQH 
_cell.length_a            52.926 
_cell.length_b            52.926 
_cell.length_c            194.139 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MQH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc2 C FE HEM . A HEM 201 1_555 E O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc3 B NE2 HIS 92 B HIS 92 1_555 D FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 129 n n 
CHA C4D HEM doub 130 n n 
CHA HHA HEM sing 131 n n 
CHB C4A HEM sing 132 n n 
CHB C1B HEM doub 133 n n 
CHB HHB HEM sing 134 n n 
CHC C4B HEM sing 135 n n 
CHC C1C HEM doub 136 n n 
CHC HHC HEM sing 137 n n 
CHD C4C HEM doub 138 n n 
CHD C1D HEM sing 139 n n 
CHD HHD HEM sing 140 n n 
C1A C2A HEM doub 141 n y 
C1A NA HEM sing 142 n y 
C2A C3A HEM sing 143 n y 
C2A CAA HEM sing 144 n n 
C3A C4A HEM doub 145 n y 
C3A CMA HEM sing 146 n n 
C4A NA HEM sing 147 n y 
CMA HMA HEM sing 148 n n 
CMA HMAA HEM sing 149 n n 
CMA HMAB HEM sing 150 n n 
CAA CBA HEM sing 151 n n 
CAA HAA HEM sing 152 n n 
CAA HAAA HEM sing 153 n n 
CBA CGA HEM sing 154 n n 
CBA HBA HEM sing 155 n n 
CBA HBAA HEM sing 156 n n 
CGA O1A HEM doub 157 n n 
CGA O2A HEM sing 158 n n 
C1B C2B HEM sing 159 n n 
C1B NB HEM sing 160 n n 
C2B C3B HEM doub 161 n n 
C2B CMB HEM sing 162 n n 
C3B C4B HEM sing 163 n n 
C3B CAB HEM sing 164 n n 
C4B NB HEM doub 165 n n 
CMB HMB HEM sing 166 n n 
CMB HMBA HEM sing 167 n n 
CMB HMBB HEM sing 168 n n 
CAB CBB HEM doub 169 n n 
CAB HAB HEM sing 170 n n 
CBB HBB HEM sing 171 n n 
CBB HBBA HEM sing 172 n n 
C1C C2C HEM sing 173 n y 
C1C NC HEM sing 174 n y 
C2C C3C HEM doub 175 n y 
C2C CMC HEM sing 176 n n 
C3C C4C HEM sing 177 n y 
C3C CAC HEM sing 178 n n 
C4C NC HEM sing 179 n y 
CMC HMC HEM sing 180 n n 
CMC HMCA HEM sing 181 n n 
CMC HMCB HEM sing 182 n n 
CAC CBC HEM doub 183 n n 
CAC HAC HEM sing 184 n n 
CBC HBC HEM sing 185 n n 
CBC HBCA HEM sing 186 n n 
C1D C2D HEM sing 187 n n 
C1D ND HEM doub 188 n n 
C2D C3D HEM doub 189 n n 
C2D CMD HEM sing 190 n n 
C3D C4D HEM sing 191 n n 
C3D CAD HEM sing 192 n n 
C4D ND HEM sing 193 n n 
CMD HMD HEM sing 194 n n 
CMD HMDA HEM sing 195 n n 
CMD HMDB HEM sing 196 n n 
CAD CBD HEM sing 197 n n 
CAD HAD HEM sing 198 n n 
CAD HADA HEM sing 199 n n 
CBD CGD HEM sing 200 n n 
CBD HBD HEM sing 201 n n 
CBD HBDA HEM sing 202 n n 
CGD O1D HEM doub 203 n n 
CGD O2D HEM sing 204 n n 
O2A H2A HEM sing 205 n n 
O2D H2D HEM sing 206 n n 
FE NA HEM sing 207 n n 
FE NB HEM sing 208 n n 
FE NC HEM sing 209 n n 
FE ND HEM sing 210 n n 
#
_atom_sites.entry_id                     4MQH 
_atom_sites.fract_transf_matrix[1][1]    0.018894 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018894 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005151 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 HEM A 1 201 142 HEM HEM . 
D 3 HEM B 1 201 147 HEM HEM . 
E 4 HOH A 1 301 204 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 16.447 0.58 16.94 1 62.5 ? CHA HEM 201 A 1 
HETATM 2 C CHB HEM . . . C 3 14.439 4.858 16.173 1 48.79 ? CHB HEM 201 A 1 
HETATM 3 C CHC HEM . . . C 3 11.173 2.693 13.282 1 43.76 ? CHC HEM 201 A 1 
HETATM 4 C CHD HEM . . . C 3 12.711 -1.588 14.646 1 49.44 ? CHD HEM 201 A 1 
HETATM 5 C C1A HEM . . . C 3 16.224 1.929 16.972 1 56.62 ? C1A HEM 201 A 1 
HETATM 6 C C2A HEM . . . C 3 17.05 2.924 17.633 1 60.68 ? C2A HEM 201 A 1 
HETATM 7 C C3A HEM . . . C 3 16.492 4.111 17.427 1 58.69 ? C3A HEM 201 A 1 
HETATM 8 C C4A HEM . . . C 3 15.304 3.896 16.625 1 51.84 ? C4A HEM 201 A 1 
HETATM 9 C CMA HEM . . . C 3 17.02 5.465 17.959 1 53.46 ? CMA HEM 201 A 1 
HETATM 10 C CAA HEM . . . C 3 18.337 2.655 18.443 1 60.68 ? CAA HEM 201 A 1 
HETATM 11 C CBA HEM . . . C 3 17.894 2.154 19.802 1 71.3 ? CBA HEM 201 A 1 
HETATM 12 C CGA HEM . . . C 3 19.109 1.896 20.637 1 87.81 ? CGA HEM 201 A 1 
HETATM 13 O O1A HEM . . . C 3 18.919 1.545 21.83 1 89.9 ? O1A HEM 201 A 1 
HETATM 14 O O2A HEM . . . C 3 20.244 2.046 20.102 1 95.71 ? O2A HEM 201 A 1 
HETATM 15 C C1B HEM . . . C 3 13.398 4.612 15.3 1 44.48 ? C1B HEM 201 A 1 
HETATM 16 C C2B HEM . . . C 3 12.526 5.625 14.768 1 39.72 ? C2B HEM 201 A 1 
HETATM 17 C C3B HEM . . . C 3 11.649 5.023 13.955 1 39.71 ? C3B HEM 201 A 1 
HETATM 18 C C4B HEM . . . C 3 11.905 3.613 13.994 1 44.39 ? C4B HEM 201 A 1 
HETATM 19 C CMB HEM . . . C 3 12.689 7.132 15.091 1 40.6 ? CMB HEM 201 A 1 
HETATM 20 C CAB HEM . . . C 3 10.466 5.609 13.155 1 31.8 ? CAB HEM 201 A 1 
HETATM 21 C CBB HEM . . . C 3 9.685 6.506 13.749 1 31.6 ? CBB HEM 201 A 1 
HETATM 22 C C1C HEM . . . C 3 11.249 1.341 13.447 1 42.09 ? C1C HEM 201 A 1 
HETATM 23 C C2C HEM . . . C 3 10.301 0.348 12.946 1 44.01 ? C2C HEM 201 A 1 
HETATM 24 C C3C HEM . . . C 3 10.747 -0.855 13.329 1 46.11 ? C3C HEM 201 A 1 
HETATM 25 C C4C HEM . . . C 3 11.953 -0.612 14.087 1 49.15 ? C4C HEM 201 A 1 
HETATM 26 C CMC HEM . . . C 3 9.037 0.681 12.109 1 41.62 ? CMC HEM 201 A 1 
HETATM 27 C CAC HEM . . . C 3 10.156 -2.274 13.109 1 37.07 ? CAC HEM 201 A 1 
HETATM 28 C CBC HEM . . . C 3 8.865 -2.522 12.786 1 37.6 ? CBC HEM 201 A 1 
HETATM 29 C C1D HEM . . . C 3 13.849 -1.385 15.363 1 57.7 ? C1D HEM 201 A 1 
HETATM 30 C C2D HEM . . . C 3 14.622 -2.475 15.894 1 64.46 ? C2D HEM 201 A 1 
HETATM 31 C C3D HEM . . . C 3 15.793 -1.818 16.616 1 66.25 ? C3D HEM 201 A 1 
HETATM 32 C C4D HEM . . . C 3 15.605 -0.389 16.444 1 63.56 ? C4D HEM 201 A 1 
HETATM 33 C CMD HEM . . . C 3 14.301 -3.968 15.751 1 50.59 ? CMD HEM 201 A 1 
HETATM 34 C CAD HEM . . . C 3 16.924 -2.541 17.358 1 73.59 ? CAD HEM 201 A 1 
HETATM 35 C CBD HEM . . . C 3 16.823 -2.098 18.807 1 82.82 ? CBD HEM 201 A 1 
HETATM 36 C CGD HEM . . . C 3 17.714 -2.964 19.625 1 96.88 ? CGD HEM 201 A 1 
HETATM 37 O O1D HEM . . . C 3 17.654 -2.816 20.867 1 107.6 ? O1D HEM 201 A 1 
HETATM 38 O O2D HEM . . . C 3 18.458 -3.788 19.029 1 103.2 ? O2D HEM 201 A 1 
HETATM 39 N NA HEM . . . C 3 15.171 2.553 16.37 1 46.35 ? NA HEM 201 A 1 
HETATM 40 N NB HEM . . . C 3 12.99 3.386 14.812 1 43.06 ? NB HEM 201 A 1 
HETATM 41 N NC HEM . . . C 3 12.243 0.73 14.143 1 38.09 ? NC HEM 201 A 1 
HETATM 42 N ND HEM . . . C 3 14.447 -0.173 15.698 1 57.65 ? ND HEM 201 A 1 
HETATM 43 FE FE HEM . . . C 3 13.793 1.597 15.22 1 43.69 3 FE HEM 201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           369 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           43 
#