data_4MQU # _model_server_result.job_id OE53XFMnQkaP-N1ejaYeLA _model_server_result.datetime_utc '2024-11-04 23:03:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mqu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 4MQU # _exptl.entry_id 4MQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 262.152 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description D-SORBITOL-6-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4MQU _cell.length_a 149.066 _cell.length_b 149.066 _cell.length_c 132.463 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,JA 1 1 B,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,KA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 R N N # _chem_comp.formula 'C6 H15 O9 P' _chem_comp.formula_weight 262.152 _chem_comp.id S6P _chem_comp.mon_nstd_flag . _chem_comp.name D-SORBITOL-6-PHOSPHATE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 1-O-PHOSPHONO-D-GLUCITOL;D-GLUCITOL-6-PHOSPHATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 S6P sing 347 n n C1 O1 S6P sing 348 n n C1 H11 S6P sing 349 n n C1 H12 S6P sing 350 n n C2 C3 S6P sing 351 n n C2 O2 S6P sing 352 n n C2 H2 S6P sing 353 n n C3 C4 S6P sing 354 n n C3 O3 S6P sing 355 n n C3 H3 S6P sing 356 n n C4 C5 S6P sing 357 n n C4 O4 S6P sing 358 n n C4 H4 S6P sing 359 n n C5 C6 S6P sing 360 n n C5 O5 S6P sing 361 n n C5 H5 S6P sing 362 n n C6 O6 S6P sing 363 n n C6 H61 S6P sing 364 n n C6 H62 S6P sing 365 n n O1 HO1 S6P sing 366 n n O2 HO2 S6P sing 367 n n O3 HO3 S6P sing 368 n n O4 HO4 S6P sing 369 n n O5 HO5 S6P sing 370 n n O6 P S6P sing 371 n n P O1P S6P sing 372 n n P O2P S6P sing 373 n n P O3P S6P doub 374 n n O1P H1P S6P sing 375 n n O2P H2P S6P sing 376 n n # _atom_sites.entry_id 4MQU _atom_sites.fract_transf_matrix[1][1] 0.006708 _atom_sites.fract_transf_matrix[1][2] 0.003873 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007549 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG9 A 1 701 1 MG9 UNL . D 3 S6P A 1 702 1 S6P S6P . E 4 IOD A 1 703 5 IOD IOD . F 4 IOD A 1 704 6 IOD IOD . G 4 IOD A 1 705 7 IOD IOD . H 4 IOD A 1 706 9 IOD IOD . I 4 IOD A 1 707 10 IOD IOD . J 4 IOD A 1 708 12 IOD IOD . K 4 IOD A 1 709 14 IOD IOD . L 4 IOD A 1 710 17 IOD IOD . M 4 IOD A 1 711 19 IOD IOD . N 4 IOD A 1 712 20 IOD IOD . O 4 IOD A 1 713 21 IOD IOD . P 4 IOD A 1 714 25 IOD IOD . Q 2 MG9 B 1 701 1 MG9 UNL . R 3 S6P B 1 702 1 S6P S6P . S 4 IOD B 1 703 1 IOD IOD . T 4 IOD B 1 704 2 IOD IOD . U 4 IOD B 1 705 3 IOD IOD . V 4 IOD B 1 706 4 IOD IOD . W 4 IOD B 1 707 8 IOD IOD . X 4 IOD B 1 708 11 IOD IOD . Y 4 IOD B 1 709 13 IOD IOD . Z 4 IOD B 1 710 15 IOD IOD . AA 4 IOD B 1 711 16 IOD IOD . BA 4 IOD B 1 712 18 IOD IOD . CA 4 IOD B 1 713 22 IOD IOD . DA 4 IOD B 1 714 23 IOD IOD . EA 4 IOD B 1 715 24 IOD IOD . FA 5 GOL B 1 716 1 GOL GOL . GA 6 SO4 B 1 717 1 SO4 SO4 . HA 6 SO4 B 1 718 2 SO4 SO4 . IA 6 SO4 B 1 719 3 SO4 SO4 . JA 7 HOH A 1 801 1 HOH HOH . JA 7 HOH A 2 802 6 HOH HOH . JA 7 HOH A 3 803 11 HOH HOH . JA 7 HOH A 4 804 16 HOH HOH . JA 7 HOH A 5 805 19 HOH HOH . JA 7 HOH A 6 806 22 HOH HOH . JA 7 HOH A 7 807 26 HOH HOH . JA 7 HOH A 8 808 28 HOH HOH . JA 7 HOH A 9 809 29 HOH HOH . JA 7 HOH A 10 810 32 HOH HOH . JA 7 HOH A 11 811 33 HOH HOH . JA 7 HOH A 12 812 34 HOH HOH . JA 7 HOH A 13 813 37 HOH HOH . JA 7 HOH A 14 814 38 HOH HOH . JA 7 HOH A 15 815 39 HOH HOH . JA 7 HOH A 16 816 40 HOH HOH . JA 7 HOH A 17 817 41 HOH HOH . JA 7 HOH A 18 818 44 HOH HOH . JA 7 HOH A 19 819 46 HOH HOH . JA 7 HOH A 20 820 48 HOH HOH . JA 7 HOH A 21 821 49 HOH HOH . JA 7 HOH A 22 822 50 HOH HOH . JA 7 HOH A 23 823 51 HOH HOH . JA 7 HOH A 24 824 55 HOH HOH . JA 7 HOH A 25 825 65 HOH HOH . JA 7 HOH A 26 826 69 HOH HOH . JA 7 HOH A 27 827 71 HOH HOH . JA 7 HOH A 28 828 77 HOH HOH . JA 7 HOH A 29 829 81 HOH HOH . JA 7 HOH A 30 830 83 HOH HOH . JA 7 HOH A 31 831 97 HOH HOH . JA 7 HOH A 32 832 99 HOH HOH . JA 7 HOH A 33 833 102 HOH HOH . JA 7 HOH A 34 834 105 HOH HOH . JA 7 HOH A 35 835 106 HOH HOH . JA 7 HOH A 36 836 107 HOH HOH . JA 7 HOH A 37 837 108 HOH HOH . JA 7 HOH A 38 838 109 HOH HOH . JA 7 HOH A 39 839 110 HOH HOH . JA 7 HOH A 40 840 111 HOH HOH . JA 7 HOH A 41 841 112 HOH HOH . JA 7 HOH A 42 842 118 HOH HOH . JA 7 HOH A 43 843 119 HOH HOH . JA 7 HOH A 44 844 120 HOH HOH . JA 7 HOH A 45 845 122 HOH HOH . JA 7 HOH A 46 846 123 HOH HOH . JA 7 HOH A 47 847 124 HOH HOH . JA 7 HOH A 48 848 125 HOH HOH . JA 7 HOH A 49 849 127 HOH HOH . JA 7 HOH A 50 850 128 HOH HOH . JA 7 HOH A 51 851 131 HOH HOH . JA 7 HOH A 52 852 133 HOH HOH . JA 7 HOH A 53 853 135 HOH HOH . JA 7 HOH A 54 854 136 HOH HOH . JA 7 HOH A 55 855 137 HOH HOH . JA 7 HOH A 56 856 138 HOH HOH . JA 7 HOH A 57 857 147 HOH HOH . JA 7 HOH A 58 858 148 HOH HOH . JA 7 HOH A 59 859 149 HOH HOH . JA 7 HOH A 60 860 150 HOH HOH . JA 7 HOH A 61 861 151 HOH HOH . JA 7 HOH A 62 862 163 HOH HOH . JA 7 HOH A 63 863 166 HOH HOH . JA 7 HOH A 64 864 167 HOH HOH . JA 7 HOH A 65 865 169 HOH HOH . JA 7 HOH A 66 866 171 HOH HOH . JA 7 HOH A 67 867 173 HOH HOH . JA 7 HOH A 68 868 181 HOH HOH . JA 7 HOH A 69 869 183 HOH HOH . JA 7 HOH A 70 870 186 HOH HOH . JA 7 HOH A 71 871 188 HOH HOH . JA 7 HOH A 72 872 194 HOH HOH . JA 7 HOH A 73 873 196 HOH HOH . JA 7 HOH A 74 874 197 HOH HOH . JA 7 HOH A 75 875 201 HOH HOH . JA 7 HOH A 76 876 203 HOH HOH . JA 7 HOH A 77 877 204 HOH HOH . JA 7 HOH A 78 878 205 HOH HOH . JA 7 HOH A 79 879 206 HOH HOH . JA 7 HOH A 80 880 207 HOH HOH . JA 7 HOH A 81 881 215 HOH HOH . JA 7 HOH A 82 882 218 HOH HOH . JA 7 HOH A 83 883 219 HOH HOH . JA 7 HOH A 84 884 222 HOH HOH . JA 7 HOH A 85 885 223 HOH HOH . JA 7 HOH A 86 886 225 HOH HOH . JA 7 HOH A 87 887 226 HOH HOH . JA 7 HOH A 88 888 228 HOH HOH . JA 7 HOH A 89 889 232 HOH HOH . JA 7 HOH A 90 890 235 HOH HOH . JA 7 HOH A 91 891 236 HOH HOH . JA 7 HOH A 92 892 237 HOH HOH . JA 7 HOH A 93 893 242 HOH HOH . JA 7 HOH A 94 894 245 HOH HOH . JA 7 HOH A 95 895 246 HOH HOH . JA 7 HOH A 96 896 248 HOH HOH . JA 7 HOH A 97 897 251 HOH HOH . KA 7 HOH B 1 801 2 HOH HOH . KA 7 HOH B 2 802 3 HOH HOH . KA 7 HOH B 3 803 4 HOH HOH . KA 7 HOH B 4 804 5 HOH HOH . KA 7 HOH B 5 805 7 HOH HOH . KA 7 HOH B 6 806 8 HOH HOH . KA 7 HOH B 7 807 9 HOH HOH . KA 7 HOH B 8 808 10 HOH HOH . KA 7 HOH B 9 809 12 HOH HOH . KA 7 HOH B 10 810 13 HOH HOH . KA 7 HOH B 11 811 14 HOH HOH . KA 7 HOH B 12 812 15 HOH HOH . KA 7 HOH B 13 813 17 HOH HOH . KA 7 HOH B 14 814 18 HOH HOH . KA 7 HOH B 15 815 20 HOH HOH . KA 7 HOH B 16 816 21 HOH HOH . KA 7 HOH B 17 817 23 HOH HOH . KA 7 HOH B 18 818 24 HOH HOH . KA 7 HOH B 19 819 25 HOH HOH . KA 7 HOH B 20 820 27 HOH HOH . KA 7 HOH B 21 821 30 HOH HOH . KA 7 HOH B 22 822 31 HOH HOH . KA 7 HOH B 23 823 35 HOH HOH . KA 7 HOH B 24 824 36 HOH HOH . KA 7 HOH B 25 825 42 HOH HOH . KA 7 HOH B 26 826 43 HOH HOH . KA 7 HOH B 27 827 45 HOH HOH . KA 7 HOH B 28 828 47 HOH HOH . KA 7 HOH B 29 829 52 HOH HOH . KA 7 HOH B 30 830 53 HOH HOH . KA 7 HOH B 31 831 54 HOH HOH . KA 7 HOH B 32 832 56 HOH HOH . KA 7 HOH B 33 833 57 HOH HOH . KA 7 HOH B 34 834 58 HOH HOH . KA 7 HOH B 35 835 59 HOH HOH . KA 7 HOH B 36 836 60 HOH HOH . KA 7 HOH B 37 837 61 HOH HOH . KA 7 HOH B 38 838 62 HOH HOH . KA 7 HOH B 39 839 63 HOH HOH . KA 7 HOH B 40 840 64 HOH HOH . KA 7 HOH B 41 841 66 HOH HOH . KA 7 HOH B 42 842 67 HOH HOH . KA 7 HOH B 43 843 68 HOH HOH . KA 7 HOH B 44 844 70 HOH HOH . KA 7 HOH B 45 845 72 HOH HOH . KA 7 HOH B 46 846 73 HOH HOH . KA 7 HOH B 47 847 74 HOH HOH . KA 7 HOH B 48 848 76 HOH HOH . KA 7 HOH B 49 849 78 HOH HOH . KA 7 HOH B 50 850 79 HOH HOH . KA 7 HOH B 51 851 80 HOH HOH . KA 7 HOH B 52 852 82 HOH HOH . KA 7 HOH B 53 853 84 HOH HOH . KA 7 HOH B 54 854 86 HOH HOH . KA 7 HOH B 55 855 87 HOH HOH . KA 7 HOH B 56 856 88 HOH HOH . KA 7 HOH B 57 857 89 HOH HOH . KA 7 HOH B 58 858 90 HOH HOH . KA 7 HOH B 59 859 91 HOH HOH . KA 7 HOH B 60 860 92 HOH HOH . KA 7 HOH B 61 861 93 HOH HOH . KA 7 HOH B 62 862 94 HOH HOH . KA 7 HOH B 63 863 95 HOH HOH . KA 7 HOH B 64 864 96 HOH HOH . KA 7 HOH B 65 865 98 HOH HOH . KA 7 HOH B 66 866 100 HOH HOH . KA 7 HOH B 67 867 101 HOH HOH . KA 7 HOH B 68 868 103 HOH HOH . KA 7 HOH B 69 869 104 HOH HOH . KA 7 HOH B 70 870 113 HOH HOH . KA 7 HOH B 71 871 114 HOH HOH . KA 7 HOH B 72 872 117 HOH HOH . KA 7 HOH B 73 873 121 HOH HOH . KA 7 HOH B 74 874 126 HOH HOH . KA 7 HOH B 75 875 129 HOH HOH . KA 7 HOH B 76 876 130 HOH HOH . KA 7 HOH B 77 877 132 HOH HOH . KA 7 HOH B 78 878 134 HOH HOH . KA 7 HOH B 79 879 139 HOH HOH . KA 7 HOH B 80 880 140 HOH HOH . KA 7 HOH B 81 881 141 HOH HOH . KA 7 HOH B 82 882 142 HOH HOH . KA 7 HOH B 83 883 144 HOH HOH . KA 7 HOH B 84 884 145 HOH HOH . KA 7 HOH B 85 885 146 HOH HOH . KA 7 HOH B 86 886 152 HOH HOH . KA 7 HOH B 87 887 153 HOH HOH . KA 7 HOH B 88 888 154 HOH HOH . KA 7 HOH B 89 889 156 HOH HOH . KA 7 HOH B 90 890 157 HOH HOH . KA 7 HOH B 91 891 158 HOH HOH . KA 7 HOH B 92 892 159 HOH HOH . KA 7 HOH B 93 893 160 HOH HOH . KA 7 HOH B 94 894 161 HOH HOH . KA 7 HOH B 95 895 162 HOH HOH . KA 7 HOH B 96 896 164 HOH HOH . KA 7 HOH B 97 897 165 HOH HOH . KA 7 HOH B 98 898 170 HOH HOH . KA 7 HOH B 99 899 172 HOH HOH . KA 7 HOH B 100 900 174 HOH HOH . KA 7 HOH B 101 901 175 HOH HOH . KA 7 HOH B 102 902 176 HOH HOH . KA 7 HOH B 103 903 177 HOH HOH . KA 7 HOH B 104 904 178 HOH HOH . KA 7 HOH B 105 905 179 HOH HOH . KA 7 HOH B 106 906 180 HOH HOH . KA 7 HOH B 107 907 182 HOH HOH . KA 7 HOH B 108 908 184 HOH HOH . KA 7 HOH B 109 909 185 HOH HOH . KA 7 HOH B 110 910 187 HOH HOH . KA 7 HOH B 111 911 189 HOH HOH . KA 7 HOH B 112 912 190 HOH HOH . KA 7 HOH B 113 913 191 HOH HOH . KA 7 HOH B 114 914 192 HOH HOH . KA 7 HOH B 115 915 193 HOH HOH . KA 7 HOH B 116 916 195 HOH HOH . KA 7 HOH B 117 917 198 HOH HOH . KA 7 HOH B 118 918 199 HOH HOH . KA 7 HOH B 119 919 200 HOH HOH . KA 7 HOH B 120 920 202 HOH HOH . KA 7 HOH B 121 921 208 HOH HOH . KA 7 HOH B 122 922 209 HOH HOH . KA 7 HOH B 123 923 210 HOH HOH . KA 7 HOH B 124 924 211 HOH HOH . KA 7 HOH B 125 925 212 HOH HOH . KA 7 HOH B 126 926 214 HOH HOH . KA 7 HOH B 127 927 221 HOH HOH . KA 7 HOH B 128 928 227 HOH HOH . KA 7 HOH B 129 929 229 HOH HOH . KA 7 HOH B 130 930 230 HOH HOH . KA 7 HOH B 131 931 231 HOH HOH . KA 7 HOH B 132 932 233 HOH HOH . KA 7 HOH B 133 933 234 HOH HOH . KA 7 HOH B 134 934 238 HOH HOH . KA 7 HOH B 135 935 239 HOH HOH . KA 7 HOH B 136 936 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 S6P . . . D 3 48.761 -24.704 -25.127 1 31.93 ? C1 S6P 702 A 1 HETATM 2 C C2 S6P . . . D 3 49.962 -25.599 -25.106 1 29.7 ? C2 S6P 702 A 1 HETATM 3 C C3 S6P . . . D 3 50.359 -25.918 -23.698 1 29.82 ? C3 S6P 702 A 1 HETATM 4 C C4 S6P . . . D 3 51.013 -24.763 -22.998 1 29.66 ? C4 S6P 702 A 1 HETATM 5 C C5 S6P . . . D 3 51.487 -25.265 -21.651 1 25.51 ? C5 S6P 702 A 1 HETATM 6 C C6 S6P . . . D 3 52.022 -24.096 -20.895 1 24.2 ? C6 S6P 702 A 1 HETATM 7 O O1 S6P . . . D 3 48.274 -24.674 -26.489 1 33.3 ? O1 S6P 702 A 1 HETATM 8 O O2 S6P . . . D 3 49.522 -26.832 -25.685 1 29.42 ? O2 S6P 702 A 1 HETATM 9 O O3 S6P . . . D 3 51.308 -26.977 -23.672 1 32.06 ? O3 S6P 702 A 1 HETATM 10 O O4 S6P . . . D 3 52.116 -24.234 -23.75 1 27.61 ? O4 S6P 702 A 1 HETATM 11 O O5 S6P . . . D 3 50.337 -25.831 -20.911 1 30.11 ? O5 S6P 702 A 1 HETATM 12 O O6 S6P . . . D 3 51.097 -23.043 -20.86 1 23.32 ? O6 S6P 702 A 1 HETATM 13 P P S6P . . . D 3 51.587 -21.787 -20.101 1 26.86 ? P S6P 702 A 1 HETATM 14 O O1P S6P . . . D 3 50.397 -20.88 -19.987 1 29.57 ? O1P S6P 702 A 1 HETATM 15 O O2P S6P . . . D 3 52.254 -22.117 -18.72 1 25.06 ? O2P S6P 702 A 1 HETATM 16 O O3P S6P . . . D 3 52.814 -21.2 -20.848 1 27.22 ? O3P S6P 702 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #