data_4MQY # _model_server_result.job_id juWxcSJqaXy_wS13PyzVYg _model_server_result.datetime_utc '2024-12-02 11:44:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mqy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4MQY # _exptl.entry_id 4MQY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 389.404 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]-N-[(2S,3R)-3-hydroxy-2-methyl-1-nitroso-1-oxobutan-2-yl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4MQY _cell.length_a 107.515 _cell.length_b 107.515 _cell.length_c 53.603 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MQY _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 79 A HIS 79 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc2 A NE2 HIS 238 A HIS 238 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc3 A OD1 ASP 242 A ASP 242 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc4 A OD2 ASP 242 A ASP 242 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc5 B ZN ZN . A ZN 401 1_555 C O04 2CW . A 2CW 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc6 B ZN ZN . A ZN 401 1_555 C O01 2CW . A 2CW 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? # _chem_comp.formula 'C22 H19 N3 O4' _chem_comp.formula_weight 389.404 _chem_comp.id 2CW _chem_comp.mon_nstd_flag . _chem_comp.name 4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]-N-[(2S,3R)-3-hydroxy-2-methyl-1-nitroso-1-oxobutan-2-yl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O27 C26 2CW sing 1 n n C26 C28 2CW sing 2 n n C26 C05 2CW sing 3 n n N03 O04 2CW doub 4 n n N03 C02 2CW sing 5 n n C29 C05 2CW sing 6 n n C05 C02 2CW sing 7 n n C05 N06 2CW sing 8 n n C02 O01 2CW doub 9 n n N06 C07 2CW sing 10 n n O25 C07 2CW doub 11 n n C07 C08 2CW sing 12 n n C24 C08 2CW doub 13 n y C24 C23 2CW sing 14 n y C08 C09 2CW sing 15 n y C23 C11 2CW doub 16 n y C09 C10 2CW doub 17 n y C11 C10 2CW sing 18 n y C11 C12 2CW sing 19 n n C12 C13 2CW trip 20 n n C13 C14 2CW sing 21 n n C14 C15 2CW trip 22 n n C15 C16 2CW sing 23 n n C16 C17 2CW doub 24 n y C16 C21 2CW sing 25 n y C17 C18 2CW sing 26 n y C21 C20 2CW doub 27 n y C18 C19 2CW doub 28 n y C20 C19 2CW sing 29 n y C19 N22 2CW sing 30 n n N06 H3 2CW sing 31 n n C09 H4 2CW sing 32 n n C10 H5 2CW sing 33 n n C17 H6 2CW sing 34 n n C18 H7 2CW sing 35 n n C20 H8 2CW sing 36 n n C21 H9 2CW sing 37 n n N22 H10 2CW sing 38 n n N22 H11 2CW sing 39 n n C23 H12 2CW sing 40 n n C24 H13 2CW sing 41 n n C26 H14 2CW sing 42 n n O27 H15 2CW sing 43 n n C28 H16 2CW sing 44 n n C28 H17 2CW sing 45 n n C28 H18 2CW sing 46 n n C29 H19 2CW sing 47 n n C29 H20 2CW sing 48 n n C29 H21 2CW sing 49 n n # _atom_sites.entry_id 4MQY _atom_sites.fract_transf_matrix[1][1] 0.009301 _atom_sites.fract_transf_matrix[1][2] 0.00537 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 1 ZN ZN . C 3 2CW A 1 402 1 2CW LIG . D 4 DMS A 1 403 1 DMS DMS . E 5 SO4 A 1 404 1 SO4 SO4 . F 5 SO4 A 1 405 2 SO4 SO4 . G 5 SO4 A 1 406 3 SO4 SO4 . H 5 SO4 A 1 407 4 SO4 SO4 . I 5 SO4 A 1 408 5 SO4 SO4 . J 6 UKW A 1 409 501 UKW UKW . K 7 HOH A 1 501 1 HOH HOH . K 7 HOH A 2 502 2 HOH HOH . K 7 HOH A 3 503 3 HOH HOH . K 7 HOH A 4 504 4 HOH HOH . K 7 HOH A 5 505 5 HOH HOH . K 7 HOH A 6 506 6 HOH HOH . K 7 HOH A 7 507 7 HOH HOH . K 7 HOH A 8 508 8 HOH HOH . K 7 HOH A 9 509 9 HOH HOH . K 7 HOH A 10 510 10 HOH HOH . K 7 HOH A 11 511 11 HOH HOH . K 7 HOH A 12 512 12 HOH HOH . K 7 HOH A 13 513 13 HOH HOH . K 7 HOH A 14 514 14 HOH HOH . K 7 HOH A 15 515 15 HOH HOH . K 7 HOH A 16 516 16 HOH HOH . K 7 HOH A 17 517 17 HOH HOH . K 7 HOH A 18 518 18 HOH HOH . K 7 HOH A 19 519 19 HOH HOH . K 7 HOH A 20 520 20 HOH HOH . K 7 HOH A 21 521 21 HOH HOH . K 7 HOH A 22 522 22 HOH HOH . K 7 HOH A 23 523 23 HOH HOH . K 7 HOH A 24 524 24 HOH HOH . K 7 HOH A 25 525 25 HOH HOH . K 7 HOH A 26 526 26 HOH HOH . K 7 HOH A 27 527 27 HOH HOH . K 7 HOH A 28 528 28 HOH HOH . K 7 HOH A 29 529 29 HOH HOH . K 7 HOH A 30 530 30 HOH HOH . K 7 HOH A 31 531 31 HOH HOH . K 7 HOH A 32 532 32 HOH HOH . K 7 HOH A 33 533 33 HOH HOH . K 7 HOH A 34 534 34 HOH HOH . K 7 HOH A 35 535 35 HOH HOH . K 7 HOH A 36 536 36 HOH HOH . K 7 HOH A 37 537 37 HOH HOH . K 7 HOH A 38 538 38 HOH HOH . K 7 HOH A 39 539 39 HOH HOH . K 7 HOH A 40 540 40 HOH HOH . K 7 HOH A 41 541 41 HOH HOH . K 7 HOH A 42 542 42 HOH HOH . K 7 HOH A 43 543 43 HOH HOH . K 7 HOH A 44 544 44 HOH HOH . K 7 HOH A 45 545 45 HOH HOH . K 7 HOH A 46 546 46 HOH HOH . K 7 HOH A 47 547 47 HOH HOH . K 7 HOH A 48 548 48 HOH HOH . K 7 HOH A 49 549 49 HOH HOH . K 7 HOH A 50 550 50 HOH HOH . K 7 HOH A 51 551 51 HOH HOH . K 7 HOH A 52 552 52 HOH HOH . K 7 HOH A 53 553 53 HOH HOH . K 7 HOH A 54 554 54 HOH HOH . K 7 HOH A 55 555 55 HOH HOH . K 7 HOH A 56 556 56 HOH HOH . K 7 HOH A 57 557 57 HOH HOH . K 7 HOH A 58 558 58 HOH HOH . K 7 HOH A 59 559 59 HOH HOH . K 7 HOH A 60 560 60 HOH HOH . K 7 HOH A 61 561 61 HOH HOH . K 7 HOH A 62 562 62 HOH HOH . K 7 HOH A 63 563 63 HOH HOH . K 7 HOH A 64 564 64 HOH HOH . K 7 HOH A 65 565 65 HOH HOH . K 7 HOH A 66 566 66 HOH HOH . K 7 HOH A 67 567 67 HOH HOH . K 7 HOH A 68 568 68 HOH HOH . K 7 HOH A 69 569 69 HOH HOH . K 7 HOH A 70 570 70 HOH HOH . K 7 HOH A 71 571 71 HOH HOH . K 7 HOH A 72 572 72 HOH HOH . K 7 HOH A 73 573 73 HOH HOH . K 7 HOH A 74 574 74 HOH HOH . K 7 HOH A 75 575 75 HOH HOH . K 7 HOH A 76 576 76 HOH HOH . K 7 HOH A 77 577 77 HOH HOH . K 7 HOH A 78 578 78 HOH HOH . K 7 HOH A 79 579 79 HOH HOH . K 7 HOH A 80 580 80 HOH HOH . K 7 HOH A 81 581 81 HOH HOH . K 7 HOH A 82 582 82 HOH HOH . K 7 HOH A 83 583 83 HOH HOH . K 7 HOH A 84 584 84 HOH HOH . K 7 HOH A 85 585 85 HOH HOH . K 7 HOH A 86 586 86 HOH HOH . K 7 HOH A 87 587 87 HOH HOH . K 7 HOH A 88 588 88 HOH HOH . K 7 HOH A 89 589 89 HOH HOH . K 7 HOH A 90 590 90 HOH HOH . K 7 HOH A 91 591 91 HOH HOH . K 7 HOH A 92 592 92 HOH HOH . K 7 HOH A 93 593 93 HOH HOH . K 7 HOH A 94 594 94 HOH HOH . K 7 HOH A 95 595 95 HOH HOH . K 7 HOH A 96 596 96 HOH HOH . K 7 HOH A 97 597 97 HOH HOH . K 7 HOH A 98 598 98 HOH HOH . K 7 HOH A 99 599 99 HOH HOH . K 7 HOH A 100 600 100 HOH HOH . K 7 HOH A 101 601 101 HOH HOH . K 7 HOH A 102 602 102 HOH HOH . K 7 HOH A 103 603 103 HOH HOH . K 7 HOH A 104 604 104 HOH HOH . K 7 HOH A 105 605 105 HOH HOH . K 7 HOH A 106 606 106 HOH HOH . K 7 HOH A 107 607 107 HOH HOH . K 7 HOH A 108 608 108 HOH HOH . K 7 HOH A 109 609 109 HOH HOH . K 7 HOH A 110 610 110 HOH HOH . K 7 HOH A 111 611 111 HOH HOH . K 7 HOH A 112 612 112 HOH HOH . K 7 HOH A 113 613 113 HOH HOH . K 7 HOH A 114 614 114 HOH HOH . K 7 HOH A 115 615 115 HOH HOH . K 7 HOH A 116 616 116 HOH HOH . K 7 HOH A 117 617 117 HOH HOH . K 7 HOH A 118 618 118 HOH HOH . K 7 HOH A 119 619 119 HOH HOH . K 7 HOH A 120 620 120 HOH HOH . K 7 HOH A 121 621 121 HOH HOH . K 7 HOH A 122 622 122 HOH HOH . K 7 HOH A 123 623 123 HOH HOH . K 7 HOH A 124 624 124 HOH HOH . K 7 HOH A 125 625 125 HOH HOH . K 7 HOH A 126 626 126 HOH HOH . K 7 HOH A 127 627 127 HOH HOH . K 7 HOH A 128 628 128 HOH HOH . K 7 HOH A 129 629 129 HOH HOH . K 7 HOH A 130 630 130 HOH HOH . K 7 HOH A 131 631 131 HOH HOH . K 7 HOH A 132 632 132 HOH HOH . K 7 HOH A 133 633 133 HOH HOH . K 7 HOH A 134 634 134 HOH HOH . K 7 HOH A 135 635 135 HOH HOH . K 7 HOH A 136 636 136 HOH HOH . K 7 HOH A 137 637 137 HOH HOH . K 7 HOH A 138 638 138 HOH HOH . K 7 HOH A 139 639 139 HOH HOH . K 7 HOH A 140 640 140 HOH HOH . K 7 HOH A 141 641 141 HOH HOH . K 7 HOH A 142 642 142 HOH HOH . K 7 HOH A 143 643 143 HOH HOH . K 7 HOH A 144 644 144 HOH HOH . K 7 HOH A 145 645 145 HOH HOH . K 7 HOH A 146 646 146 HOH HOH . K 7 HOH A 147 647 147 HOH HOH . K 7 HOH A 148 648 148 HOH HOH . K 7 HOH A 149 649 149 HOH HOH . K 7 HOH A 150 650 150 HOH HOH . K 7 HOH A 151 651 151 HOH HOH . K 7 HOH A 152 652 152 HOH HOH . K 7 HOH A 153 653 153 HOH HOH . K 7 HOH A 154 654 154 HOH HOH . K 7 HOH A 155 655 155 HOH HOH . K 7 HOH A 156 656 156 HOH HOH . K 7 HOH A 157 657 157 HOH HOH . K 7 HOH A 158 658 158 HOH HOH . K 7 HOH A 159 659 159 HOH HOH . K 7 HOH A 160 660 160 HOH HOH . K 7 HOH A 161 661 161 HOH HOH . K 7 HOH A 162 662 162 HOH HOH . K 7 HOH A 163 663 163 HOH HOH . K 7 HOH A 164 664 164 HOH HOH . K 7 HOH A 165 665 165 HOH HOH . K 7 HOH A 166 666 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 2CW . . . C 3 191.728 105.566 0.824 1 44.79 ? O01 2CW 402 A 1 HETATM 2 C C02 2CW . . . C 3 192.476 105.164 -0.065 1 43.34 ? C02 2CW 402 A 1 HETATM 3 N N03 2CW . . . C 3 193.147 105.967 -0.902 1 39.24 ? N03 2CW 402 A 1 HETATM 4 O O04 2CW . . . C 3 192.963 107.405 -0.728 1 48.2 ? O04 2CW 402 A 1 HETATM 5 C C05 2CW . . . C 3 192.703 103.667 -0.287 1 50.1 ? C05 2CW 402 A 1 HETATM 6 N N06 2CW . . . C 3 192.464 102.943 0.971 1 50.49 ? N06 2CW 402 A 1 HETATM 7 C C07 2CW . . . C 3 193.295 103.203 1.989 1 55.29 ? C07 2CW 402 A 1 HETATM 8 C C08 2CW . . . C 3 193.032 102.498 3.157 1 53.12 ? C08 2CW 402 A 1 HETATM 9 C C09 2CW . . . C 3 193.236 103.099 4.393 1 53.32 ? C09 2CW 402 A 1 HETATM 10 C C10 2CW . . . C 3 192.972 102.393 5.562 1 51.34 ? C10 2CW 402 A 1 HETATM 11 C C11 2CW . . . C 3 192.504 101.086 5.494 1 48.89 ? C11 2CW 402 A 1 HETATM 12 C C12 2CW . . . C 3 192.247 100.488 6.724 1 38.3 ? C12 2CW 402 A 1 HETATM 13 C C13 2CW . . . C 3 192.01 99.879 7.904 1 40.64 ? C13 2CW 402 A 1 HETATM 14 C C14 2CW . . . C 3 191.761 99.19 9.023 1 46.12 ? C14 2CW 402 A 1 HETATM 15 C C15 2CW . . . C 3 191.51 98.483 9.996 1 53.54 ? C15 2CW 402 A 1 HETATM 16 C C16 2CW . . . C 3 191.235 97.685 11.125 1 59.92 ? C16 2CW 402 A 1 HETATM 17 C C17 2CW . . . C 3 189.927 97.557 11.58 1 61.82 ? C17 2CW 402 A 1 HETATM 18 C C18 2CW . . . C 3 189.664 96.852 12.748 1 66.09 ? C18 2CW 402 A 1 HETATM 19 C C19 2CW . . . C 3 190.708 96.273 13.461 1 66.75 ? C19 2CW 402 A 1 HETATM 20 C C20 2CW . . . C 3 192.016 96.402 13.007 1 66.16 ? C20 2CW 402 A 1 HETATM 21 C C21 2CW . . . C 3 192.279 97.108 11.838 1 65.44 ? C21 2CW 402 A 1 HETATM 22 N N22 2CW . . . C 3 190.456 95.599 14.579 1 65.07 ? N22 2CW 402 A 1 HETATM 23 C C23 2CW . . . C 3 192.3 100.485 4.257 1 54.5 ? C23 2CW 402 A 1 HETATM 24 C C24 2CW . . . C 3 192.564 101.19 3.089 1 55.74 ? C24 2CW 402 A 1 HETATM 25 O O25 2CW . . . C 3 194.23 104 1.927 1 65.6 ? O25 2CW 402 A 1 HETATM 26 C C26 2CW . . . C 3 191.737 103.158 -1.359 1 50.84 ? C26 2CW 402 A 1 HETATM 27 O O27 2CW . . . C 3 191.838 103.983 -2.523 1 55.24 ? O27 2CW 402 A 1 HETATM 28 C C28 2CW . . . C 3 190.304 103.207 -0.821 1 49.09 ? C28 2CW 402 A 1 HETATM 29 C C29 2CW . . . C 3 194.143 103.431 -0.744 1 55.83 ? C29 2CW 402 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #