data_4MQY
#
_model_server_result.job_id            I7Kyqm_xm9Ui5DmGTzX9NQ 
_model_server_result.datetime_utc      '2024-10-19 16:27:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mqy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":409}' 
#
_entry.id    4MQY 
#
_exptl.entry_id    4MQY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              260.245 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-ethynyl-N-[(1S,2R)-2-hydroxy-1-(oxocarbamoyl)propyl]benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4MQY 
_cell.length_a            107.515 
_cell.length_b            107.515 
_cell.length_c            53.603 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MQY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 79 A HIS 79 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? 
metalc ? metalc2 A NE2 HIS 238 A HIS 238 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc3 A OD1 ASP 242 A ASP 242 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc4 A OD2 ASP 242 A ASP 242 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc5 B ZN ZN . A ZN 401 1_555 C O04 2CW . A 2CW 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? 
metalc ? metalc6 B ZN ZN . A ZN 401 1_555 C O01 2CW . A 2CW 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? 
#
_chem_comp.formula           'C13 H12 N2 O4' 
_chem_comp.formula_weight    260.245 
_chem_comp.id                UKW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-ethynyl-N-[(1S,2R)-2-hydroxy-1-(oxocarbamoyl)propyl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C02 O01 UKW doub 420 n n 
N03 C02 UKW sing 421 n n 
C05 C02 UKW sing 422 n n 
O04 N03 UKW doub 423 n n 
N06 C05 UKW sing 424 n n 
C25 C05 UKW sing 425 n n 
C05 H05 UKW sing 426 n n 
N06 C07 UKW sing 427 n n 
N06 HN06 UKW sing 428 n n 
C09 C07 UKW sing 429 n n 
C07 O08 UKW doub 430 n n 
C14 C09 UKW doub 431 n y 
C09 C10 UKW sing 432 n y 
C11 C10 UKW doub 433 n y 
C10 H10 UKW sing 434 n n 
C12 C11 UKW sing 435 n y 
C11 H11 UKW sing 436 n n 
C15 C12 UKW sing 437 n n 
C13 C12 UKW doub 438 n y 
C13 C14 UKW sing 439 n y 
C13 H13 UKW sing 440 n n 
C14 H14 UKW sing 441 n n 
C16 C15 UKW trip 442 n n 
C16 H16 UKW sing 443 n n 
O27 C25 UKW sing 444 n n 
C25 C26 UKW sing 445 n n 
C25 H25 UKW sing 446 n n 
C26 H26 UKW sing 447 n n 
C26 H26A UKW sing 448 n n 
C26 H26B UKW sing 449 n n 
O27 HO27 UKW sing 450 n n 
#
_atom_sites.entry_id                     4MQY 
_atom_sites.fract_transf_matrix[1][1]    0.009301 
_atom_sites.fract_transf_matrix[1][2]    0.00537 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01074 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018656 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 401 1 ZN ZN . 
C 3 2CW A 1 402 1 2CW LIG . 
D 4 DMS A 1 403 1 DMS DMS . 
E 5 SO4 A 1 404 1 SO4 SO4 . 
F 5 SO4 A 1 405 2 SO4 SO4 . 
G 5 SO4 A 1 406 3 SO4 SO4 . 
H 5 SO4 A 1 407 4 SO4 SO4 . 
I 5 SO4 A 1 408 5 SO4 SO4 . 
J 6 UKW A 1 409 501 UKW UKW . 
K 7 HOH A 1 501 1 HOH HOH . 
K 7 HOH A 2 502 2 HOH HOH . 
K 7 HOH A 3 503 3 HOH HOH . 
K 7 HOH A 4 504 4 HOH HOH . 
K 7 HOH A 5 505 5 HOH HOH . 
K 7 HOH A 6 506 6 HOH HOH . 
K 7 HOH A 7 507 7 HOH HOH . 
K 7 HOH A 8 508 8 HOH HOH . 
K 7 HOH A 9 509 9 HOH HOH . 
K 7 HOH A 10 510 10 HOH HOH . 
K 7 HOH A 11 511 11 HOH HOH . 
K 7 HOH A 12 512 12 HOH HOH . 
K 7 HOH A 13 513 13 HOH HOH . 
K 7 HOH A 14 514 14 HOH HOH . 
K 7 HOH A 15 515 15 HOH HOH . 
K 7 HOH A 16 516 16 HOH HOH . 
K 7 HOH A 17 517 17 HOH HOH . 
K 7 HOH A 18 518 18 HOH HOH . 
K 7 HOH A 19 519 19 HOH HOH . 
K 7 HOH A 20 520 20 HOH HOH . 
K 7 HOH A 21 521 21 HOH HOH . 
K 7 HOH A 22 522 22 HOH HOH . 
K 7 HOH A 23 523 23 HOH HOH . 
K 7 HOH A 24 524 24 HOH HOH . 
K 7 HOH A 25 525 25 HOH HOH . 
K 7 HOH A 26 526 26 HOH HOH . 
K 7 HOH A 27 527 27 HOH HOH . 
K 7 HOH A 28 528 28 HOH HOH . 
K 7 HOH A 29 529 29 HOH HOH . 
K 7 HOH A 30 530 30 HOH HOH . 
K 7 HOH A 31 531 31 HOH HOH . 
K 7 HOH A 32 532 32 HOH HOH . 
K 7 HOH A 33 533 33 HOH HOH . 
K 7 HOH A 34 534 34 HOH HOH . 
K 7 HOH A 35 535 35 HOH HOH . 
K 7 HOH A 36 536 36 HOH HOH . 
K 7 HOH A 37 537 37 HOH HOH . 
K 7 HOH A 38 538 38 HOH HOH . 
K 7 HOH A 39 539 39 HOH HOH . 
K 7 HOH A 40 540 40 HOH HOH . 
K 7 HOH A 41 541 41 HOH HOH . 
K 7 HOH A 42 542 42 HOH HOH . 
K 7 HOH A 43 543 43 HOH HOH . 
K 7 HOH A 44 544 44 HOH HOH . 
K 7 HOH A 45 545 45 HOH HOH . 
K 7 HOH A 46 546 46 HOH HOH . 
K 7 HOH A 47 547 47 HOH HOH . 
K 7 HOH A 48 548 48 HOH HOH . 
K 7 HOH A 49 549 49 HOH HOH . 
K 7 HOH A 50 550 50 HOH HOH . 
K 7 HOH A 51 551 51 HOH HOH . 
K 7 HOH A 52 552 52 HOH HOH . 
K 7 HOH A 53 553 53 HOH HOH . 
K 7 HOH A 54 554 54 HOH HOH . 
K 7 HOH A 55 555 55 HOH HOH . 
K 7 HOH A 56 556 56 HOH HOH . 
K 7 HOH A 57 557 57 HOH HOH . 
K 7 HOH A 58 558 58 HOH HOH . 
K 7 HOH A 59 559 59 HOH HOH . 
K 7 HOH A 60 560 60 HOH HOH . 
K 7 HOH A 61 561 61 HOH HOH . 
K 7 HOH A 62 562 62 HOH HOH . 
K 7 HOH A 63 563 63 HOH HOH . 
K 7 HOH A 64 564 64 HOH HOH . 
K 7 HOH A 65 565 65 HOH HOH . 
K 7 HOH A 66 566 66 HOH HOH . 
K 7 HOH A 67 567 67 HOH HOH . 
K 7 HOH A 68 568 68 HOH HOH . 
K 7 HOH A 69 569 69 HOH HOH . 
K 7 HOH A 70 570 70 HOH HOH . 
K 7 HOH A 71 571 71 HOH HOH . 
K 7 HOH A 72 572 72 HOH HOH . 
K 7 HOH A 73 573 73 HOH HOH . 
K 7 HOH A 74 574 74 HOH HOH . 
K 7 HOH A 75 575 75 HOH HOH . 
K 7 HOH A 76 576 76 HOH HOH . 
K 7 HOH A 77 577 77 HOH HOH . 
K 7 HOH A 78 578 78 HOH HOH . 
K 7 HOH A 79 579 79 HOH HOH . 
K 7 HOH A 80 580 80 HOH HOH . 
K 7 HOH A 81 581 81 HOH HOH . 
K 7 HOH A 82 582 82 HOH HOH . 
K 7 HOH A 83 583 83 HOH HOH . 
K 7 HOH A 84 584 84 HOH HOH . 
K 7 HOH A 85 585 85 HOH HOH . 
K 7 HOH A 86 586 86 HOH HOH . 
K 7 HOH A 87 587 87 HOH HOH . 
K 7 HOH A 88 588 88 HOH HOH . 
K 7 HOH A 89 589 89 HOH HOH . 
K 7 HOH A 90 590 90 HOH HOH . 
K 7 HOH A 91 591 91 HOH HOH . 
K 7 HOH A 92 592 92 HOH HOH . 
K 7 HOH A 93 593 93 HOH HOH . 
K 7 HOH A 94 594 94 HOH HOH . 
K 7 HOH A 95 595 95 HOH HOH . 
K 7 HOH A 96 596 96 HOH HOH . 
K 7 HOH A 97 597 97 HOH HOH . 
K 7 HOH A 98 598 98 HOH HOH . 
K 7 HOH A 99 599 99 HOH HOH . 
K 7 HOH A 100 600 100 HOH HOH . 
K 7 HOH A 101 601 101 HOH HOH . 
K 7 HOH A 102 602 102 HOH HOH . 
K 7 HOH A 103 603 103 HOH HOH . 
K 7 HOH A 104 604 104 HOH HOH . 
K 7 HOH A 105 605 105 HOH HOH . 
K 7 HOH A 106 606 106 HOH HOH . 
K 7 HOH A 107 607 107 HOH HOH . 
K 7 HOH A 108 608 108 HOH HOH . 
K 7 HOH A 109 609 109 HOH HOH . 
K 7 HOH A 110 610 110 HOH HOH . 
K 7 HOH A 111 611 111 HOH HOH . 
K 7 HOH A 112 612 112 HOH HOH . 
K 7 HOH A 113 613 113 HOH HOH . 
K 7 HOH A 114 614 114 HOH HOH . 
K 7 HOH A 115 615 115 HOH HOH . 
K 7 HOH A 116 616 116 HOH HOH . 
K 7 HOH A 117 617 117 HOH HOH . 
K 7 HOH A 118 618 118 HOH HOH . 
K 7 HOH A 119 619 119 HOH HOH . 
K 7 HOH A 120 620 120 HOH HOH . 
K 7 HOH A 121 621 121 HOH HOH . 
K 7 HOH A 122 622 122 HOH HOH . 
K 7 HOH A 123 623 123 HOH HOH . 
K 7 HOH A 124 624 124 HOH HOH . 
K 7 HOH A 125 625 125 HOH HOH . 
K 7 HOH A 126 626 126 HOH HOH . 
K 7 HOH A 127 627 127 HOH HOH . 
K 7 HOH A 128 628 128 HOH HOH . 
K 7 HOH A 129 629 129 HOH HOH . 
K 7 HOH A 130 630 130 HOH HOH . 
K 7 HOH A 131 631 131 HOH HOH . 
K 7 HOH A 132 632 132 HOH HOH . 
K 7 HOH A 133 633 133 HOH HOH . 
K 7 HOH A 134 634 134 HOH HOH . 
K 7 HOH A 135 635 135 HOH HOH . 
K 7 HOH A 136 636 136 HOH HOH . 
K 7 HOH A 137 637 137 HOH HOH . 
K 7 HOH A 138 638 138 HOH HOH . 
K 7 HOH A 139 639 139 HOH HOH . 
K 7 HOH A 140 640 140 HOH HOH . 
K 7 HOH A 141 641 141 HOH HOH . 
K 7 HOH A 142 642 142 HOH HOH . 
K 7 HOH A 143 643 143 HOH HOH . 
K 7 HOH A 144 644 144 HOH HOH . 
K 7 HOH A 145 645 145 HOH HOH . 
K 7 HOH A 146 646 146 HOH HOH . 
K 7 HOH A 147 647 147 HOH HOH . 
K 7 HOH A 148 648 148 HOH HOH . 
K 7 HOH A 149 649 149 HOH HOH . 
K 7 HOH A 150 650 150 HOH HOH . 
K 7 HOH A 151 651 151 HOH HOH . 
K 7 HOH A 152 652 152 HOH HOH . 
K 7 HOH A 153 653 153 HOH HOH . 
K 7 HOH A 154 654 154 HOH HOH . 
K 7 HOH A 155 655 155 HOH HOH . 
K 7 HOH A 156 656 156 HOH HOH . 
K 7 HOH A 157 657 157 HOH HOH . 
K 7 HOH A 158 658 158 HOH HOH . 
K 7 HOH A 159 659 159 HOH HOH . 
K 7 HOH A 160 660 160 HOH HOH . 
K 7 HOH A 161 661 161 HOH HOH . 
K 7 HOH A 162 662 162 HOH HOH . 
K 7 HOH A 163 663 163 HOH HOH . 
K 7 HOH A 164 664 164 HOH HOH . 
K 7 HOH A 165 665 165 HOH HOH . 
K 7 HOH A 166 666 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 UKW . . . J 6 190.839 90.027 -2.888 1 45.67 ? O01 UKW 409 A 1 
HETATM 2 C C02 UKW . . . J 6 191.823 90.467 -2.283 1 51.73 ? C02 UKW 409 A 1 
HETATM 3 N N03 UKW . . . J 6 191.676 91.689 -1.559 1 54.58 ? N03 UKW 409 A 1 
HETATM 4 O O04 UKW . . . J 6 190.497 92.247 -1.576 1 56.2 ? O04 UKW 409 A 1 
HETATM 5 C C05 UKW . . . J 6 193.177 89.782 -2.343 1 47.82 ? C05 UKW 409 A 1 
HETATM 6 N N06 UKW . . . J 6 194.304 90.511 -1.734 1 46.86 ? N06 UKW 409 A 1 
HETATM 7 C C07 UKW . . . J 6 195.119 91.518 -2.349 1 49.96 ? C07 UKW 409 A 1 
HETATM 8 O O08 UKW . . . J 6 194.892 91.919 -3.481 1 53.26 ? O08 UKW 409 A 1 
HETATM 9 C C09 UKW . . . J 6 196.298 92.014 -1.485 1 52.98 ? C09 UKW 409 A 1 
HETATM 10 C C10 UKW . . . J 6 196.683 91.182 -0.407 1 53.89 ? C10 UKW 409 A 1 
HETATM 11 C C11 UKW . . . J 6 197.764 91.518 0.426 1 56.77 ? C11 UKW 409 A 1 
HETATM 12 C C12 UKW . . . J 6 198.48 92.68 0.178 1 57.28 ? C12 UKW 409 A 1 
HETATM 13 C C13 UKW . . . J 6 198.106 93.504 -0.91 1 55.47 ? C13 UKW 409 A 1 
HETATM 14 C C14 UKW . . . J 6 197.02 93.166 -1.749 1 54.53 ? C14 UKW 409 A 1 
HETATM 15 C C15 UKW . . . J 6 199.663 93.053 1.079 1 58.13 ? C15 UKW 409 A 1 
HETATM 16 C C25 UKW . . . J 6 193.367 88.584 -1.501 1 46.28 ? C25 UKW 409 A 1 
HETATM 17 C C26 UKW . . . J 6 192.183 88.228 -0.658 1 35.51 ? C26 UKW 409 A 1 
HETATM 18 O O27 UKW . . . J 6 193.938 87.527 -2.163 1 49.24 ? O27 UKW 409 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           18 
#