data_4MRI
#
_model_server_result.job_id            zSAFj5K-8ScZC6UF8KExEA 
_model_server_result.datetime_utc      '2024-11-24 19:01:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mri 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4MRI 
#
_exptl.entry_id    4MRI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              211.11 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MRI 
_cell.length_a            146.17 
_cell.length_b            146.17 
_cell.length_c            103.134 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MRI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 21 A HIS 21 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc2 A OE1 GLU 24 A GLU 24 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc3 A OE2 GLU 24 A GLU 24 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc4 A ND1 HIS 116 A HIS 116 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc5 C ZN ZN . A ZN 401 1_555 D OAD AS9 . A AS9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc6 C ZN ZN . A ZN 401 1_555 D OAG AS9 . A AS9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc7 B ND1 HIS 21 B HIS 21 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc8 B OE1 GLU 24 B GLU 24 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.804 ? 
metalc ? metalc9 B ND1 HIS 116 B HIS 116 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc10 E ZN ZN . B ZN 401 1_555 F OAD AS9 . B AS9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc11 E ZN ZN . B ZN 401 1_555 F OAG AS9 . B AS9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? 
#
_chem_comp.formula           'C5 H10 N O6 P' 
_chem_comp.formula_weight    211.11 
_chem_comp.id                AS9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     'N-PHOSPHONOMETHYL-L-ASPARTIC ACID;(2S)-2-(HYDROPEROXY(METHOXY)PHOSPHORYLAMINO)SUCCINIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA PAM AS9 sing 39 n n 
CAA HAA1 AS9 sing 40 n n 
CAA HAA2 AS9 sing 41 n n 
CAA HAA3 AS9 sing 42 n n 
PAM OAG AS9 doub 43 n n 
PAM N AS9 sing 44 n n 
PAM OAD AS9 sing 45 n n 
OAD HOAD AS9 sing 46 n n 
N CA AS9 sing 47 n n 
N H AS9 sing 48 n n 
CA C AS9 sing 49 n n 
CA CB AS9 sing 50 n n 
CA HA AS9 sing 51 n n 
C O AS9 doub 52 n n 
C OXT AS9 sing 53 n n 
OXT HXT AS9 sing 54 n n 
CB CG AS9 sing 55 n n 
CB HB2 AS9 sing 56 n n 
CB HB3 AS9 sing 57 n n 
CG OD2 AS9 doub 58 n n 
CG OD1 AS9 sing 59 n n 
OD1 HD1 AS9 sing 60 n n 
#
_atom_sites.entry_id                     4MRI 
_atom_sites.fract_transf_matrix[1][1]    0.006841 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006841 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009696 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 401 ZN ZN . 
D 3 AS9 A 1 402 501 AS9 AS9 . 
E 2 ZN B 1 401 401 ZN ZN . 
F 3 AS9 B 1 402 501 AS9 AS9 . 
G 4 HOH A 1 501 502 HOH HOH . 
G 4 HOH A 2 502 503 HOH HOH . 
G 4 HOH A 3 503 504 HOH HOH . 
G 4 HOH A 4 504 505 HOH HOH . 
G 4 HOH A 5 505 506 HOH HOH . 
G 4 HOH A 6 506 507 HOH HOH . 
G 4 HOH A 7 507 508 HOH HOH . 
G 4 HOH A 8 508 509 HOH HOH . 
G 4 HOH A 9 509 510 HOH HOH . 
G 4 HOH A 10 510 513 HOH HOH . 
G 4 HOH A 11 511 514 HOH HOH . 
G 4 HOH A 12 512 515 HOH HOH . 
G 4 HOH A 13 513 516 HOH HOH . 
G 4 HOH A 14 514 517 HOH HOH . 
G 4 HOH A 15 515 519 HOH HOH . 
G 4 HOH A 16 516 520 HOH HOH . 
G 4 HOH A 17 517 521 HOH HOH . 
G 4 HOH A 18 518 522 HOH HOH . 
G 4 HOH A 19 519 523 HOH HOH . 
G 4 HOH A 20 520 525 HOH HOH . 
G 4 HOH A 21 521 526 HOH HOH . 
G 4 HOH A 22 522 528 HOH HOH . 
G 4 HOH A 23 523 529 HOH HOH . 
G 4 HOH A 24 524 531 HOH HOH . 
G 4 HOH A 25 525 532 HOH HOH . 
G 4 HOH A 26 526 534 HOH HOH . 
G 4 HOH A 27 527 536 HOH HOH . 
G 4 HOH A 28 528 537 HOH HOH . 
G 4 HOH A 29 529 504 HOH HOH . 
G 4 HOH A 30 530 1 HOH HOH . 
G 4 HOH A 31 531 2 HOH HOH . 
G 4 HOH A 32 532 11 HOH HOH . 
G 4 HOH A 33 533 12 HOH HOH . 
H 4 HOH B 1 501 502 HOH HOH . 
H 4 HOH B 2 502 503 HOH HOH . 
H 4 HOH B 3 503 506 HOH HOH . 
H 4 HOH B 4 504 507 HOH HOH . 
H 4 HOH B 5 505 508 HOH HOH . 
H 4 HOH B 6 506 511 HOH HOH . 
H 4 HOH B 7 507 512 HOH HOH . 
H 4 HOH B 8 508 513 HOH HOH . 
H 4 HOH B 9 509 515 HOH HOH . 
H 4 HOH B 10 510 516 HOH HOH . 
H 4 HOH B 11 511 517 HOH HOH . 
H 4 HOH B 12 512 518 HOH HOH . 
H 4 HOH B 13 513 519 HOH HOH . 
H 4 HOH B 14 514 520 HOH HOH . 
H 4 HOH B 15 515 521 HOH HOH . 
H 4 HOH B 16 516 522 HOH HOH . 
H 4 HOH B 17 517 523 HOH HOH . 
H 4 HOH B 18 518 524 HOH HOH . 
H 4 HOH B 19 519 525 HOH HOH . 
H 4 HOH B 20 520 526 HOH HOH . 
H 4 HOH B 21 521 527 HOH HOH . 
H 4 HOH B 22 522 529 HOH HOH . 
H 4 HOH B 23 523 530 HOH HOH . 
H 4 HOH B 24 524 531 HOH HOH . 
H 4 HOH B 25 525 532 HOH HOH . 
H 4 HOH B 26 526 533 HOH HOH . 
H 4 HOH B 27 527 534 HOH HOH . 
H 4 HOH B 28 528 3 HOH HOH . 
H 4 HOH B 29 529 4 HOH HOH . 
H 4 HOH B 30 530 5 HOH HOH . 
H 4 HOH B 31 531 6 HOH HOH . 
H 4 HOH B 32 532 7 HOH HOH . 
H 4 HOH B 33 533 8 HOH HOH . 
H 4 HOH B 34 534 9 HOH HOH . 
H 4 HOH B 35 535 10 HOH HOH . 
H 4 HOH B 36 536 13 HOH HOH . 
H 4 HOH B 37 537 14 HOH HOH . 
H 4 HOH B 38 538 15 HOH HOH . 
H 4 HOH B 39 539 16 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA AS9 . . . D 3 -42.58 10.699 -38.438 1 31.76 ? CAA AS9 402 A 1 
HETATM 2 P PAM AS9 . . . D 3 -43.515 10.499 -39.97 1 32.56 ? PAM AS9 402 A 1 
HETATM 3 O OAG AS9 . . . D 3 -44.911 10.029 -39.745 1 29.94 ? OAG AS9 402 A 1 
HETATM 4 O OAD AS9 . . . D 3 -43.494 11.918 -40.726 1 32.75 ? OAD AS9 402 A 1 
HETATM 5 N N AS9 . . . D 3 -42.655 9.31 -40.92 1 33.92 ? N AS9 402 A 1 
HETATM 6 C CA AS9 . . . D 3 -43.173 8.793 -42.173 1 35.11 ? CA AS9 402 A 1 
HETATM 7 C C AS9 . . . D 3 -44.132 7.648 -41.935 1 35.1 ? C AS9 402 A 1 
HETATM 8 O OXT AS9 . . . D 3 -44.956 7.239 -42.79 1 33.62 ? OXT AS9 402 A 1 
HETATM 9 O O AS9 . . . D 3 -44.064 7.096 -40.825 1 37.94 ? O AS9 402 A 1 
HETATM 10 C CB AS9 . . . D 3 -41.943 8.374 -42.987 1 35.64 ? CB AS9 402 A 1 
HETATM 11 C CG AS9 . . . D 3 -42.106 8.569 -44.489 1 35.62 ? CG AS9 402 A 1 
HETATM 12 O OD2 AS9 . . . D 3 -42.341 9.73 -44.918 1 36.58 ? OD2 AS9 402 A 1 
HETATM 13 O OD1 AS9 . . . D 3 -41.976 7.567 -45.235 1 31.34 ? OD1 AS9 402 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           653 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           13 
#