data_4MTV
#
_model_server_result.job_id            6mnCa5qroAZWi1vxHCTqow 
_model_server_result.datetime_utc      '2024-11-08 09:57:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mtv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    4MTV 
#
_exptl.entry_id    4MTV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MTV 
_cell.length_a            62.87 
_cell.length_b            66.499 
_cell.length_c            107.126 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MTV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 NAG NAG C1 O1 . O4 HO4 . sing 
3 ? 2 4 3 NAG NAG C1 O1 . O4 HO4 . sing 
4 ? 2 5 4 NAG NAG C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B NAG 1 B 1 NAG A 364 NAG 
2 n B NAG 2 B 2 NAG A 365 NAG 
2 n B NAG 3 B 3 NAG A 367 NAG 
2 n B NAG 4 B 4 NAG A 368 NAG 
2 n B NAG 5 B 5 NAG A 369 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 30 A CYS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf2 A SG CYS 278 A CYS 279 1_555 A SG CYS 342 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
covale ? covale1 A ND2 ASN 39 A ASN 39 1_555 C C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? 
covale ? covale3 B O4 NAG . B NAG 2 1_555 B C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? 
covale ? covale4 B O4 NAG . B NAG 3 1_555 B C1 NAG . B NAG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.415 ? 
covale ? covale5 B O4 NAG . B NAG 4 1_555 B C1 NAG . B NAG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     4MTV 
_atom_sites.fract_transf_matrix[1][1]    0.015906 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015038 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NAG A 1 401 363 NAG NAG . 
D 4 HOH A 1 501 368 HOH HOH . 
D 4 HOH A 2 502 370 HOH HOH . 
D 4 HOH A 3 503 371 HOH HOH . 
D 4 HOH A 4 504 372 HOH HOH . 
D 4 HOH A 5 505 373 HOH HOH . 
D 4 HOH A 6 506 374 HOH HOH . 
D 4 HOH A 7 507 375 HOH HOH . 
D 4 HOH A 8 508 378 HOH HOH . 
D 4 HOH A 9 509 379 HOH HOH . 
D 4 HOH A 10 510 381 HOH HOH . 
D 4 HOH A 11 511 382 HOH HOH . 
D 4 HOH A 12 512 383 HOH HOH . 
D 4 HOH A 13 513 385 HOH HOH . 
D 4 HOH A 14 514 386 HOH HOH . 
D 4 HOH A 15 515 387 HOH HOH . 
D 4 HOH A 16 516 388 HOH HOH . 
D 4 HOH A 17 517 390 HOH HOH . 
D 4 HOH A 18 518 391 HOH HOH . 
D 4 HOH A 19 519 392 HOH HOH . 
D 4 HOH A 20 520 394 HOH HOH . 
D 4 HOH A 21 521 396 HOH HOH . 
D 4 HOH A 22 522 397 HOH HOH . 
D 4 HOH A 23 523 400 HOH HOH . 
D 4 HOH A 24 524 402 HOH HOH . 
D 4 HOH A 25 525 403 HOH HOH . 
D 4 HOH A 26 526 404 HOH HOH . 
D 4 HOH A 27 527 405 HOH HOH . 
D 4 HOH A 28 528 406 HOH HOH . 
D 4 HOH A 29 529 407 HOH HOH . 
D 4 HOH A 30 530 408 HOH HOH . 
D 4 HOH A 31 531 413 HOH HOH . 
D 4 HOH A 32 532 416 HOH HOH . 
D 4 HOH A 33 533 417 HOH HOH . 
D 4 HOH A 34 534 419 HOH HOH . 
D 4 HOH A 35 535 422 HOH HOH . 
D 4 HOH A 36 536 423 HOH HOH . 
D 4 HOH A 37 537 424 HOH HOH . 
D 4 HOH A 38 538 425 HOH HOH . 
D 4 HOH A 39 539 426 HOH HOH . 
D 4 HOH A 40 540 429 HOH HOH . 
D 4 HOH A 41 541 430 HOH HOH . 
D 4 HOH A 42 542 432 HOH HOH . 
D 4 HOH A 43 543 434 HOH HOH . 
D 4 HOH A 44 544 435 HOH HOH . 
D 4 HOH A 45 545 436 HOH HOH . 
D 4 HOH A 46 546 437 HOH HOH . 
D 4 HOH A 47 547 439 HOH HOH . 
D 4 HOH A 48 548 440 HOH HOH . 
D 4 HOH A 49 549 441 HOH HOH . 
D 4 HOH A 50 550 442 HOH HOH . 
D 4 HOH A 51 551 444 HOH HOH . 
D 4 HOH A 52 552 447 HOH HOH . 
D 4 HOH A 53 553 448 HOH HOH . 
D 4 HOH A 54 554 449 HOH HOH . 
D 4 HOH A 55 555 450 HOH HOH . 
D 4 HOH A 56 556 451 HOH HOH . 
D 4 HOH A 57 557 453 HOH HOH . 
D 4 HOH A 58 558 455 HOH HOH . 
D 4 HOH A 59 559 457 HOH HOH . 
D 4 HOH A 60 560 458 HOH HOH . 
D 4 HOH A 61 561 460 HOH HOH . 
D 4 HOH A 62 562 461 HOH HOH . 
D 4 HOH A 63 563 462 HOH HOH . 
D 4 HOH A 64 564 465 HOH HOH . 
D 4 HOH A 65 565 466 HOH HOH . 
D 4 HOH A 66 566 468 HOH HOH . 
D 4 HOH A 67 567 470 HOH HOH . 
D 4 HOH A 68 568 471 HOH HOH . 
D 4 HOH A 69 569 473 HOH HOH . 
D 4 HOH A 70 570 474 HOH HOH . 
D 4 HOH A 71 571 475 HOH HOH . 
D 4 HOH A 72 572 477 HOH HOH . 
D 4 HOH A 73 573 478 HOH HOH . 
D 4 HOH A 74 574 480 HOH HOH . 
D 4 HOH A 75 575 481 HOH HOH . 
D 4 HOH A 76 576 487 HOH HOH . 
D 4 HOH A 77 577 489 HOH HOH . 
D 4 HOH A 78 578 490 HOH HOH . 
D 4 HOH A 79 579 492 HOH HOH . 
D 4 HOH A 80 580 493 HOH HOH . 
D 4 HOH A 81 581 494 HOH HOH . 
D 4 HOH A 82 582 495 HOH HOH . 
D 4 HOH A 83 583 496 HOH HOH . 
D 4 HOH A 84 584 497 HOH HOH . 
D 4 HOH A 85 585 498 HOH HOH . 
D 4 HOH A 86 586 500 HOH HOH . 
D 4 HOH A 87 587 505 HOH HOH . 
D 4 HOH A 88 588 506 HOH HOH . 
D 4 HOH A 89 589 508 HOH HOH . 
D 4 HOH A 90 590 510 HOH HOH . 
D 4 HOH A 91 591 511 HOH HOH . 
D 4 HOH A 92 592 512 HOH HOH . 
D 4 HOH A 93 593 513 HOH HOH . 
D 4 HOH A 94 594 514 HOH HOH . 
D 4 HOH A 95 595 515 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 3 -17.47 17.774 8.274 1 29.05 ? C1 NAG 401 A 1 
HETATM 2 C C2 NAG . . . C 3 -16.952 18.293 9.629 1 30.33 ? C2 NAG 401 A 1 
HETATM 3 C C3 NAG . . . C 3 -17.53 19.662 10.091 1 33.8 ? C3 NAG 401 A 1 
HETATM 4 C C4 NAG . . . C 3 -18.077 20.569 8.963 1 33.51 ? C4 NAG 401 A 1 
HETATM 5 C C5 NAG . . . C 3 -18.896 19.663 8.044 1 32.35 ? C5 NAG 401 A 1 
HETATM 6 C C6 NAG . . . C 3 -19.764 20.384 7.009 1 32.04 ? C6 NAG 401 A 1 
HETATM 7 C C7 NAG . . . C 3 -16.401 16.651 11.461 1 31.71 ? C7 NAG 401 A 1 
HETATM 8 C C8 NAG . . . C 3 -17.023 15.791 12.537 1 31.32 ? C8 NAG 401 A 1 
HETATM 9 N N2 NAG . . . C 3 -17.278 17.369 10.706 1 30.3 ? N2 NAG 401 A 1 
HETATM 10 O O3 NAG . . . C 3 -16.58 20.37 10.903 1 32 ? O3 NAG 401 A 1 
HETATM 11 O O4 NAG . . . C 3 -18.832 21.655 9.506 1 37.67 ? O4 NAG 401 A 1 
HETATM 12 O O5 NAG . . . C 3 -17.964 18.801 7.408 1 29.97 ? O5 NAG 401 A 1 
HETATM 13 O O6 NAG . . . C 3 -18.91 20.808 5.965 1 32.13 ? O6 NAG 401 A 1 
HETATM 14 O O7 NAG . . . C 3 -15.162 16.618 11.339 1 28.29 ? O7 NAG 401 A 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#