data_4MVS # _model_server_result.job_id Q8BUDVlay57vb847vhALag _model_server_result.datetime_utc '2024-11-22 21:10:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mvs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":1301}' # _entry.id 4MVS # _exptl.entry_id 4MVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 132.89 _cell.angle_gamma 90 _cell.entry_id 4MVS _cell.length_a 178.59 _cell.length_b 178.65 _cell.length_c 131.135 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 L N N ? 2 Q N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 183 A GLU 1165 1_555 F CD CD . A CD 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc2 E CD CD . A CD 1301 1_555 Z O HOH . A HOH 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 E CD CD . A CD 1301 1_555 AA O HOH . B HOH 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc4 E CD CD . A CD 1301 1_555 BA O HOH . C HOH 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc5 E CD CD . A CD 1301 1_555 BA O HOH . C HOH 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc6 E CD CD . A CD 1301 1_555 CA O HOH . D HOH 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc7 E CD CD . A CD 1301 1_555 CA O HOH . D HOH 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc8 B O PRO 175 B PRO 1157 1_555 L CD CD . B CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc9 B OE2 GLU 183 B GLU 1165 1_555 L CD CD . B CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc10 C OE1 GLU 183 C GLU 1165 1_555 Q CD CD . C CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc11 C OE2 GLU 183 C GLU 1165 1_555 Q CD CD . C CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc12 D O PRO 175 D PRO 1157 1_555 V CD CD . D CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.696 ? metalc ? metalc13 D OE2 GLU 183 D GLU 1165 1_555 V CD CD . D CD 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4MVS _atom_sites.fract_transf_matrix[1][1] 0.005599 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005201 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CD A 1 1301 1 CD CD . F 2 CD A 1 1302 1 CD CD . G 3 PX4 A 1 1303 4002 PX4 PX4 . H 3 PX4 A 1 1304 4011 PX4 PX4 . I 3 PX4 A 1 1305 4011 PX4 PX4 . J 3 PX4 A 1 1306 4017 PX4 PX4 . K 3 PX4 A 1 1307 4002 PX4 PX4 . L 2 CD B 1 1301 1 CD CD . M 3 PX4 B 1 1302 4002 PX4 PX4 . N 3 PX4 B 1 1303 4011 PX4 PX4 . O 3 PX4 B 1 1304 4017 PX4 PX4 . P 3 PX4 B 1 1305 4002 PX4 PX4 . Q 2 CD C 1 1301 1 CD CD . R 3 PX4 C 1 1302 4002 PX4 PX4 . S 3 PX4 C 1 1303 4011 PX4 PX4 . T 3 PX4 C 1 1304 4017 PX4 PX4 . U 3 PX4 C 1 1305 4002 PX4 PX4 . V 2 CD D 1 1301 1 CD CD . W 3 PX4 D 1 1302 4002 PX4 PX4 . X 3 PX4 D 1 1303 4017 PX4 PX4 . Y 3 PX4 D 1 1304 4002 PX4 PX4 . Z 4 HOH A 1 1401 3 HOH HOH . AA 4 HOH B 1 1401 1 HOH HOH . BA 4 HOH C 1 1401 4 HOH HOH . BA 4 HOH C 2 1402 6 HOH HOH . CA 4 HOH D 1 1401 2 HOH HOH . CA 4 HOH D 2 1402 5 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id V _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.555 _atom_site.Cartn_y -51.083 _atom_site.Cartn_z 4.481 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 107 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 1301 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #