data_4MW7 # _model_server_result.job_id D2-GN9jaX8-MGlRV2haJaA _model_server_result.datetime_utc '2024-10-14 15:19:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4mw7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 4MW7 # _exptl.entry_id 4MW7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4MW7 _cell.length_a 87.071 _cell.length_b 105.862 _cell.length_c 207.276 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,V 1 1 B,P,Q,R,S,T,U,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 P N N ? 2 Q N N ? 2 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 238 A HIS 469 1_555 A N CAS 239 A CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CAS 239 A CAS 470 1_555 A N VAL 240 A VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 B C HIS 238 B HIS 469 1_555 B N CAS 239 B CAS 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C CAS 239 B CAS 470 1_555 B N VAL 240 B VAL 471 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 206 n n C1 C2 GOL sing 207 n n C1 H11 GOL sing 208 n n C1 H12 GOL sing 209 n n O1 HO1 GOL sing 210 n n C2 O2 GOL sing 211 n n C2 C3 GOL sing 212 n n C2 H2 GOL sing 213 n n O2 HO2 GOL sing 214 n n C3 O3 GOL sing 215 n n C3 H31 GOL sing 216 n n C3 H32 GOL sing 217 n n O3 HO3 GOL sing 218 n n # _atom_sites.entry_id 4MW7 _atom_sites.fract_transf_matrix[1][1] 0.011485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009446 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 801 900 GOL GOL . D 2 GOL A 1 802 901 GOL GOL . E 2 GOL A 1 803 902 GOL GOL . F 2 GOL A 1 804 903 GOL GOL . G 2 GOL A 1 805 904 GOL GOL . H 2 GOL A 1 806 908 GOL GOL . I 2 GOL A 1 807 909 GOL GOL . J 2 GOL A 1 808 911 GOL GOL . K 3 DMS A 1 809 912 DMS DMS . L 3 DMS A 1 810 913 DMS DMS . M 3 DMS A 1 811 914 DMS DMS . N 3 DMS A 1 812 915 DMS DMS . O 4 MET A 1 813 800 MET MET . P 2 GOL B 1 801 900 GOL GOL . Q 2 GOL B 1 802 901 GOL GOL . R 2 GOL B 1 803 904 GOL GOL . S 3 DMS B 1 804 910 DMS DMS . T 5 SO4 B 1 805 914 SO4 SO4 . U 6 2EF B 1 806 1 2EF 469 . V 7 HOH A 1 901 3 HOH HOH . V 7 HOH A 2 902 4 HOH HOH . V 7 HOH A 3 903 8 HOH HOH . V 7 HOH A 4 904 11 HOH HOH . V 7 HOH A 5 905 14 HOH HOH . V 7 HOH A 6 906 15 HOH HOH . V 7 HOH A 7 907 16 HOH HOH . V 7 HOH A 8 908 19 HOH HOH . V 7 HOH A 9 909 21 HOH HOH . V 7 HOH A 10 910 22 HOH HOH . V 7 HOH A 11 911 25 HOH HOH . V 7 HOH A 12 912 26 HOH HOH . V 7 HOH A 13 913 27 HOH HOH . V 7 HOH A 14 914 28 HOH HOH . V 7 HOH A 15 915 30 HOH HOH . V 7 HOH A 16 916 32 HOH HOH . V 7 HOH A 17 917 35 HOH HOH . V 7 HOH A 18 918 37 HOH HOH . V 7 HOH A 19 919 40 HOH HOH . V 7 HOH A 20 920 41 HOH HOH . V 7 HOH A 21 921 42 HOH HOH . V 7 HOH A 22 922 45 HOH HOH . V 7 HOH A 23 923 46 HOH HOH . V 7 HOH A 24 924 50 HOH HOH . V 7 HOH A 25 925 51 HOH HOH . V 7 HOH A 26 926 55 HOH HOH . V 7 HOH A 27 927 56 HOH HOH . V 7 HOH A 28 928 59 HOH HOH . V 7 HOH A 29 929 60 HOH HOH . V 7 HOH A 30 930 64 HOH HOH . V 7 HOH A 31 931 65 HOH HOH . V 7 HOH A 32 932 67 HOH HOH . V 7 HOH A 33 933 70 HOH HOH . V 7 HOH A 34 934 74 HOH HOH . V 7 HOH A 35 935 76 HOH HOH . V 7 HOH A 36 936 79 HOH HOH . V 7 HOH A 37 937 80 HOH HOH . V 7 HOH A 38 938 82 HOH HOH . V 7 HOH A 39 939 90 HOH HOH . V 7 HOH A 40 940 91 HOH HOH . V 7 HOH A 41 941 93 HOH HOH . V 7 HOH A 42 942 96 HOH HOH . V 7 HOH A 43 943 106 HOH HOH . V 7 HOH A 44 944 108 HOH HOH . V 7 HOH A 45 945 109 HOH HOH . V 7 HOH A 46 946 110 HOH HOH . V 7 HOH A 47 947 111 HOH HOH . V 7 HOH A 48 948 112 HOH HOH . V 7 HOH A 49 949 114 HOH HOH . V 7 HOH A 50 950 116 HOH HOH . V 7 HOH A 51 951 118 HOH HOH . V 7 HOH A 52 952 119 HOH HOH . V 7 HOH A 53 953 125 HOH HOH . V 7 HOH A 54 954 126 HOH HOH . V 7 HOH A 55 955 127 HOH HOH . V 7 HOH A 56 956 130 HOH HOH . V 7 HOH A 57 957 132 HOH HOH . V 7 HOH A 58 958 133 HOH HOH . V 7 HOH A 59 959 136 HOH HOH . V 7 HOH A 60 960 141 HOH HOH . V 7 HOH A 61 961 142 HOH HOH . V 7 HOH A 62 962 146 HOH HOH . V 7 HOH A 63 963 148 HOH HOH . V 7 HOH A 64 964 150 HOH HOH . V 7 HOH A 65 965 152 HOH HOH . V 7 HOH A 66 966 156 HOH HOH . V 7 HOH A 67 967 157 HOH HOH . V 7 HOH A 68 968 159 HOH HOH . V 7 HOH A 69 969 160 HOH HOH . V 7 HOH A 70 970 163 HOH HOH . V 7 HOH A 71 971 164 HOH HOH . V 7 HOH A 72 972 165 HOH HOH . V 7 HOH A 73 973 166 HOH HOH . V 7 HOH A 74 974 167 HOH HOH . V 7 HOH A 75 975 168 HOH HOH . V 7 HOH A 76 976 169 HOH HOH . W 7 HOH B 1 901 1 HOH HOH . W 7 HOH B 2 902 2 HOH HOH . W 7 HOH B 3 903 5 HOH HOH . W 7 HOH B 4 904 6 HOH HOH . W 7 HOH B 5 905 7 HOH HOH . W 7 HOH B 6 906 9 HOH HOH . W 7 HOH B 7 907 10 HOH HOH . W 7 HOH B 8 908 12 HOH HOH . W 7 HOH B 9 909 13 HOH HOH . W 7 HOH B 10 910 17 HOH HOH . W 7 HOH B 11 911 18 HOH HOH . W 7 HOH B 12 912 20 HOH HOH . W 7 HOH B 13 913 23 HOH HOH . W 7 HOH B 14 914 24 HOH HOH . W 7 HOH B 15 915 29 HOH HOH . W 7 HOH B 16 916 31 HOH HOH . W 7 HOH B 17 917 33 HOH HOH . W 7 HOH B 18 918 34 HOH HOH . W 7 HOH B 19 919 36 HOH HOH . W 7 HOH B 20 920 38 HOH HOH . W 7 HOH B 21 921 39 HOH HOH . W 7 HOH B 22 922 43 HOH HOH . W 7 HOH B 23 923 44 HOH HOH . W 7 HOH B 24 924 47 HOH HOH . W 7 HOH B 25 925 48 HOH HOH . W 7 HOH B 26 926 49 HOH HOH . W 7 HOH B 27 927 52 HOH HOH . W 7 HOH B 28 928 53 HOH HOH . W 7 HOH B 29 929 54 HOH HOH . W 7 HOH B 30 930 57 HOH HOH . W 7 HOH B 31 931 58 HOH HOH . W 7 HOH B 32 932 61 HOH HOH . W 7 HOH B 33 933 62 HOH HOH . W 7 HOH B 34 934 63 HOH HOH . W 7 HOH B 35 935 66 HOH HOH . W 7 HOH B 36 936 68 HOH HOH . W 7 HOH B 37 937 69 HOH HOH . W 7 HOH B 38 938 71 HOH HOH . W 7 HOH B 39 939 72 HOH HOH . W 7 HOH B 40 940 73 HOH HOH . W 7 HOH B 41 941 75 HOH HOH . W 7 HOH B 42 942 77 HOH HOH . W 7 HOH B 43 943 78 HOH HOH . W 7 HOH B 44 944 81 HOH HOH . W 7 HOH B 45 945 83 HOH HOH . W 7 HOH B 46 946 84 HOH HOH . W 7 HOH B 47 947 85 HOH HOH . W 7 HOH B 48 948 86 HOH HOH . W 7 HOH B 49 949 87 HOH HOH . W 7 HOH B 50 950 88 HOH HOH . W 7 HOH B 51 951 89 HOH HOH . W 7 HOH B 52 952 92 HOH HOH . W 7 HOH B 53 953 94 HOH HOH . W 7 HOH B 54 954 95 HOH HOH . W 7 HOH B 55 955 97 HOH HOH . W 7 HOH B 56 956 98 HOH HOH . W 7 HOH B 57 957 99 HOH HOH . W 7 HOH B 58 958 100 HOH HOH . W 7 HOH B 59 959 101 HOH HOH . W 7 HOH B 60 960 102 HOH HOH . W 7 HOH B 61 961 103 HOH HOH . W 7 HOH B 62 962 104 HOH HOH . W 7 HOH B 63 963 105 HOH HOH . W 7 HOH B 64 964 107 HOH HOH . W 7 HOH B 65 965 113 HOH HOH . W 7 HOH B 66 966 115 HOH HOH . W 7 HOH B 67 967 117 HOH HOH . W 7 HOH B 68 968 120 HOH HOH . W 7 HOH B 69 969 121 HOH HOH . W 7 HOH B 70 970 122 HOH HOH . W 7 HOH B 71 971 123 HOH HOH . W 7 HOH B 72 972 124 HOH HOH . W 7 HOH B 73 973 128 HOH HOH . W 7 HOH B 74 974 129 HOH HOH . W 7 HOH B 75 975 131 HOH HOH . W 7 HOH B 76 976 134 HOH HOH . W 7 HOH B 77 977 135 HOH HOH . W 7 HOH B 78 978 137 HOH HOH . W 7 HOH B 79 979 138 HOH HOH . W 7 HOH B 80 980 139 HOH HOH . W 7 HOH B 81 981 140 HOH HOH . W 7 HOH B 82 982 143 HOH HOH . W 7 HOH B 83 983 144 HOH HOH . W 7 HOH B 84 984 145 HOH HOH . W 7 HOH B 85 985 147 HOH HOH . W 7 HOH B 86 986 149 HOH HOH . W 7 HOH B 87 987 151 HOH HOH . W 7 HOH B 88 988 153 HOH HOH . W 7 HOH B 89 989 154 HOH HOH . W 7 HOH B 90 990 155 HOH HOH . W 7 HOH B 91 991 158 HOH HOH . W 7 HOH B 92 992 161 HOH HOH . W 7 HOH B 93 993 162 HOH HOH . W 7 HOH B 94 994 170 HOH HOH . W 7 HOH B 95 995 171 HOH HOH . W 7 HOH B 96 996 172 HOH HOH . W 7 HOH B 97 997 173 HOH HOH . W 7 HOH B 98 998 174 HOH HOH . W 7 HOH B 99 999 175 HOH HOH . W 7 HOH B 100 1000 176 HOH HOH . W 7 HOH B 101 1001 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 18.289 8.149 46.899 1 46.05 ? C1 GOL 801 A 1 HETATM 2 O O1 GOL . . . C 2 17.125 8.276 46.093 1 50.55 ? O1 GOL 801 A 1 HETATM 3 C C2 GOL . . . C 2 19.083 9.439 46.816 1 47.57 ? C2 GOL 801 A 1 HETATM 4 O O2 GOL . . . C 2 18.681 10.248 47.928 1 46.53 ? O2 GOL 801 A 1 HETATM 5 C C3 GOL . . . C 2 20.585 9.145 46.861 1 49.21 ? C3 GOL 801 A 1 HETATM 6 O O3 GOL . . . C 2 21.339 10.235 47.423 1 50.52 ? O3 GOL 801 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #