data_4MX3
#
_model_server_result.job_id            tAX6U3gEZ9FOZDFSld7xXA 
_model_server_result.datetime_utc      '2025-07-02 15:07:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4mx3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4MX3 
#
_exptl.entry_id    4MX3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              329.206 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4MX3 
_cell.length_a            104.672 
_cell.length_b            104.672 
_cell.length_c            218.327 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4MX3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,C,D 2 1 
B,E,F 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
_chem_comp.formula           'C10 H12 N5 O6 P' 
_chem_comp.formula_weight    329.206 
_chem_comp.id                CMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'CYCLIC AMP;CAMP' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P CMP doub 70 n n 
P O2P CMP sing 71 n n 
P O5' CMP sing 72 n n 
P O3' CMP sing 73 n n 
O2P HOP2 CMP sing 74 n n 
O5' C5' CMP sing 75 n n 
C5' C4' CMP sing 76 n n 
C5' "H5'1" CMP sing 77 n n 
C5' "H5'2" CMP sing 78 n n 
C4' O4' CMP sing 79 n n 
C4' C3' CMP sing 80 n n 
C4' H4' CMP sing 81 n n 
O4' C1' CMP sing 82 n n 
C3' O3' CMP sing 83 n n 
C3' C2' CMP sing 84 n n 
C3' H3' CMP sing 85 n n 
C2' O2' CMP sing 86 n n 
C2' C1' CMP sing 87 n n 
C2' H2' CMP sing 88 n n 
O2' HO2' CMP sing 89 n n 
C1' N9 CMP sing 90 n n 
C1' H1' CMP sing 91 n n 
N9 C8 CMP sing 92 n y 
N9 C4 CMP sing 93 n y 
C8 N7 CMP doub 94 n y 
C8 H8 CMP sing 95 n n 
N7 C5 CMP sing 96 n y 
C5 C6 CMP sing 97 n y 
C5 C4 CMP doub 98 n y 
C6 N6 CMP sing 99 n n 
C6 N1 CMP doub 100 n y 
N6 HN61 CMP sing 101 n n 
N6 HN62 CMP sing 102 n n 
N1 C2 CMP sing 103 n y 
C2 N3 CMP doub 104 n y 
C2 H2 CMP sing 105 n n 
N3 C4 CMP sing 106 n y 
#
_atom_sites.entry_id                     4MX3 
_atom_sites.fract_transf_matrix[1][1]    0.009554 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009554 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00458 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CMP A 1 401 401 CMP CMP . 
D 2 CMP A 1 402 601 CMP CMP . 
E 2 CMP B 1 401 401 CMP CMP . 
F 2 CMP B 1 402 601 CMP CMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P CMP . . . D 2 -1.825 -4.544 68.435 1 192.11 ? P CMP 402 A 1 
HETATM 2 O O1P CMP . . . D 2 -0.879 -5.656 68.015 1 151.96 ? O1P CMP 402 A 1 
HETATM 3 O O2P CMP . . . D 2 -2.778 -4.225 67.311 1 159.31 ? O2P CMP 402 A 1 
HETATM 4 O O5' CMP . . . D 2 -1 -3.196 68.856 1 170.22 ? O5' CMP 402 A 1 
HETATM 5 C C5' CMP . . . D 2 -1.38 -2.296 69.919 1 131.05 ? C5' CMP 402 A 1 
HETATM 6 C C4' CMP . . . D 2 -1.988 -3.08 71.089 1 176.4 ? C4' CMP 402 A 1 
HETATM 7 O O4' CMP . . . D 2 -2.588 -2.301 72.139 1 189.91 ? O4' CMP 402 A 1 
HETATM 8 C C3' CMP . . . D 2 -3.139 -3.946 70.607 1 176.62 ? C3' CMP 402 A 1 
HETATM 9 O O3' CMP . . . D 2 -2.655 -4.985 69.759 1 187.22 ? O3' CMP 402 A 1 
HETATM 10 C C2' CMP . . . D 2 -3.879 -4.303 71.893 1 200.65 ? C2' CMP 402 A 1 
HETATM 11 O O2' CMP . . . D 2 -3.323 -5.421 72.587 1 205.7 ? O2' CMP 402 A 1 
HETATM 12 C C1' CMP . . . D 2 -3.7 -3.028 72.722 1 219.95 ? C1' CMP 402 A 1 
HETATM 13 N N9 CMP . . . D 2 -4.945 -2.191 72.755 1 253.58 ? N9 CMP 402 A 1 
HETATM 14 C C8 CMP . . . D 2 -5.34 -1.43 73.8 1 245.95 ? C8 CMP 402 A 1 
HETATM 15 N N7 CMP . . . D 2 -6.504 -0.779 73.542 1 258.22 ? N7 CMP 402 A 1 
HETATM 16 C C5 CMP . . . D 2 -6.889 -1.117 72.296 1 236.31 ? C5 CMP 402 A 1 
HETATM 17 C C6 CMP . . . D 2 -8.028 -0.789 71.398 1 217.97 ? C6 CMP 402 A 1 
HETATM 18 N N6 CMP . . . D 2 -9.018 0.059 71.786 1 224.23 ? N6 CMP 402 A 1 
HETATM 19 N N1 CMP . . . D 2 -8.049 -1.368 70.17 1 229.47 ? N1 CMP 402 A 1 
HETATM 20 C C2 CMP . . . D 2 -7.082 -2.211 69.76 1 236.44 ? C2 CMP 402 A 1 
HETATM 21 N N3 CMP . . . D 2 -6.025 -2.546 70.524 1 244.15 ? N3 CMP 402 A 1 
HETATM 22 C C4 CMP . . . D 2 -5.868 -2.045 71.78 1 250.12 ? C4 CMP 402 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#