data_4MY1 # _model_server_result.job_id UK-REldxRBBXSj7gZbeWFw _model_server_result.datetime_utc '2024-11-09 01:26:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4my1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":501}' # _entry.id 4MY1 # _exptl.entry_id 4MY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 390.274 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-bromophenyl)-3-(2-{3-[(1E)-N-hydroxyethanimidoyl]phenyl}propan-2-yl)urea _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 81.13 _cell.angle_beta 89.95 _cell.angle_gamma 83.59 _cell.entry_id 4MY1 _cell.length_a 83.22 _cell.length_b 89.391 _cell.length_c 103.987 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4MY1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,Y,Z,AA,BA 1 1 E,F,G,H,Q,R,S,T,U,V,W,X,CA,DA,EA,FA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N ? 3 S N N ? 3 V N N ? 3 X N N # _chem_comp.formula 'C18 H20 Br N3 O2' _chem_comp.formula_weight 390.274 _chem_comp.id P68 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-bromophenyl)-3-(2-{3-[(1E)-N-hydroxyethanimidoyl]phenyl}propan-2-yl)urea _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 P68 sing 275 n n C1 C12 P68 sing 276 n n C1 C3 P68 sing 277 n n C1 N1 P68 sing 278 n n C13 C12 P68 doub 279 n y C13 C14 P68 sing 280 n y C12 C17 P68 sing 281 n y C14 C15 P68 doub 282 n y N1 C4 P68 sing 283 n n C17 C16 P68 doub 284 n y C15 C16 P68 sing 285 n y C16 C18 P68 sing 286 n n C19 C18 P68 sing 287 n n C18 N4 P68 doub 288 e n C4 N2 P68 sing 289 n n C4 O P68 doub 290 n n N4 O2 P68 sing 291 n n N2 C5 P68 sing 292 n n C5 C10 P68 doub 293 n y C5 C6 P68 sing 294 n y C10 C9 P68 sing 295 n y C6 C7 P68 doub 296 n y C9 C8 P68 doub 297 n y C7 C8 P68 sing 298 n y C8 BR1 P68 sing 299 n n C7 H1 P68 sing 300 n n C6 H2 P68 sing 301 n n C9 H3 P68 sing 302 n n C10 H4 P68 sing 303 n n N2 H5 P68 sing 304 n n N1 H6 P68 sing 305 n n C2 H7 P68 sing 306 n n C2 H8 P68 sing 307 n n C2 H9 P68 sing 308 n n C3 H10 P68 sing 309 n n C3 H11 P68 sing 310 n n C3 H12 P68 sing 311 n n C17 H13 P68 sing 312 n n O2 H14 P68 sing 313 n n C19 H15 P68 sing 314 n n C19 H16 P68 sing 315 n n C19 H17 P68 sing 316 n n C15 H18 P68 sing 317 n n C14 H19 P68 sing 318 n n C13 H20 P68 sing 319 n n # _atom_sites.entry_id 4MY1 _atom_sites.fract_transf_matrix[1][1] 0.012016 _atom_sites.fract_transf_matrix[1][2] -0.00135 _atom_sites.fract_transf_matrix[1][3] 0.000202 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011257 _atom_sites.fract_transf_matrix[2][3] -0.001766 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009734 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 IMP A 1 500 500 IMP IMP . J 3 P68 A 1 501 501 P68 P68 . K 2 IMP B 1 500 500 IMP IMP . L 3 P68 B 1 501 501 P68 P68 . M 2 IMP C 1 500 500 IMP IMP . N 3 P68 C 1 501 501 P68 P68 . O 2 IMP D 1 500 500 IMP IMP . P 3 P68 D 1 501 501 P68 P68 . Q 2 IMP E 1 501 500 IMP IMP . R 3 P68 E 1 502 501 P68 P68 . S 3 P68 E 1 503 501 P68 P68 . T 2 IMP F 1 500 500 IMP IMP . U 2 IMP G 1 500 500 IMP IMP . V 3 P68 G 1 501 501 P68 P68 . W 2 IMP H 1 500 500 IMP IMP . X 3 P68 H 1 501 501 P68 P68 . Y 4 HOH A 1 601 8 HOH HOH . Y 4 HOH A 2 602 19 HOH HOH . Y 4 HOH A 3 603 21 HOH HOH . Y 4 HOH A 4 604 26 HOH HOH . Y 4 HOH A 5 605 34 HOH HOH . Y 4 HOH A 6 606 39 HOH HOH . Y 4 HOH A 7 607 41 HOH HOH . Y 4 HOH A 8 608 47 HOH HOH . Y 4 HOH A 9 609 50 HOH HOH . Y 4 HOH A 10 610 62 HOH HOH . Y 4 HOH A 11 611 63 HOH HOH . Y 4 HOH A 12 612 67 HOH HOH . Y 4 HOH A 13 613 72 HOH HOH . Y 4 HOH A 14 614 85 HOH HOH . Y 4 HOH A 15 615 88 HOH HOH . Y 4 HOH A 16 616 92 HOH HOH . Y 4 HOH A 17 617 97 HOH HOH . Y 4 HOH A 18 618 98 HOH HOH . Y 4 HOH A 19 619 100 HOH HOH . Y 4 HOH A 20 620 104 HOH HOH . Y 4 HOH A 21 621 107 HOH HOH . Z 4 HOH B 1 601 5 HOH HOH . Z 4 HOH B 2 602 10 HOH HOH . Z 4 HOH B 3 603 12 HOH HOH . Z 4 HOH B 4 604 13 HOH HOH . Z 4 HOH B 5 605 29 HOH HOH . Z 4 HOH B 6 606 32 HOH HOH . Z 4 HOH B 7 607 36 HOH HOH . Z 4 HOH B 8 608 37 HOH HOH . Z 4 HOH B 9 609 52 HOH HOH . Z 4 HOH B 10 610 53 HOH HOH . Z 4 HOH B 11 611 54 HOH HOH . Z 4 HOH B 12 612 58 HOH HOH . Z 4 HOH B 13 613 59 HOH HOH . Z 4 HOH B 14 614 61 HOH HOH . Z 4 HOH B 15 615 65 HOH HOH . Z 4 HOH B 16 616 66 HOH HOH . Z 4 HOH B 17 617 71 HOH HOH . Z 4 HOH B 18 618 84 HOH HOH . Z 4 HOH B 19 619 103 HOH HOH . Z 4 HOH B 20 620 116 HOH HOH . AA 4 HOH C 1 601 1 HOH HOH . AA 4 HOH C 2 602 3 HOH HOH . AA 4 HOH C 3 603 18 HOH HOH . AA 4 HOH C 4 604 22 HOH HOH . AA 4 HOH C 5 605 24 HOH HOH . AA 4 HOH C 6 606 27 HOH HOH . AA 4 HOH C 7 607 28 HOH HOH . AA 4 HOH C 8 608 30 HOH HOH . AA 4 HOH C 9 609 38 HOH HOH . AA 4 HOH C 10 610 43 HOH HOH . AA 4 HOH C 11 611 45 HOH HOH . AA 4 HOH C 12 612 57 HOH HOH . AA 4 HOH C 13 613 75 HOH HOH . AA 4 HOH C 14 614 77 HOH HOH . AA 4 HOH C 15 615 80 HOH HOH . AA 4 HOH C 16 616 81 HOH HOH . AA 4 HOH C 17 617 94 HOH HOH . AA 4 HOH C 18 618 96 HOH HOH . AA 4 HOH C 19 619 102 HOH HOH . AA 4 HOH C 20 620 109 HOH HOH . AA 4 HOH C 21 621 111 HOH HOH . BA 4 HOH D 1 601 2 HOH HOH . BA 4 HOH D 2 602 14 HOH HOH . BA 4 HOH D 3 603 15 HOH HOH . BA 4 HOH D 4 604 16 HOH HOH . BA 4 HOH D 5 605 31 HOH HOH . BA 4 HOH D 6 606 35 HOH HOH . BA 4 HOH D 7 607 46 HOH HOH . BA 4 HOH D 8 608 73 HOH HOH . BA 4 HOH D 9 609 76 HOH HOH . BA 4 HOH D 10 610 78 HOH HOH . BA 4 HOH D 11 611 95 HOH HOH . BA 4 HOH D 12 612 99 HOH HOH . BA 4 HOH D 13 613 115 HOH HOH . BA 4 HOH D 14 614 117 HOH HOH . CA 4 HOH E 1 601 20 HOH HOH . CA 4 HOH E 2 602 25 HOH HOH . CA 4 HOH E 3 603 44 HOH HOH . CA 4 HOH E 4 604 51 HOH HOH . CA 4 HOH E 5 605 56 HOH HOH . CA 4 HOH E 6 606 60 HOH HOH . CA 4 HOH E 7 607 69 HOH HOH . CA 4 HOH E 8 608 89 HOH HOH . CA 4 HOH E 9 609 91 HOH HOH . DA 4 HOH F 1 601 40 HOH HOH . DA 4 HOH F 2 602 49 HOH HOH . DA 4 HOH F 3 603 74 HOH HOH . DA 4 HOH F 4 604 82 HOH HOH . DA 4 HOH F 5 605 106 HOH HOH . DA 4 HOH F 6 606 108 HOH HOH . DA 4 HOH F 7 607 113 HOH HOH . EA 4 HOH G 1 601 9 HOH HOH . EA 4 HOH G 2 602 23 HOH HOH . EA 4 HOH G 3 603 48 HOH HOH . EA 4 HOH G 4 604 64 HOH HOH . EA 4 HOH G 5 605 70 HOH HOH . EA 4 HOH G 6 606 79 HOH HOH . EA 4 HOH G 7 607 83 HOH HOH . EA 4 HOH G 8 608 90 HOH HOH . EA 4 HOH G 9 609 110 HOH HOH . EA 4 HOH G 10 610 112 HOH HOH . FA 4 HOH H 1 601 4 HOH HOH . FA 4 HOH H 2 602 6 HOH HOH . FA 4 HOH H 3 603 7 HOH HOH . FA 4 HOH H 4 604 11 HOH HOH . FA 4 HOH H 5 605 17 HOH HOH . FA 4 HOH H 6 606 33 HOH HOH . FA 4 HOH H 7 607 42 HOH HOH . FA 4 HOH H 8 608 55 HOH HOH . FA 4 HOH H 9 609 68 HOH HOH . FA 4 HOH H 10 610 86 HOH HOH . FA 4 HOH H 11 611 87 HOH HOH . FA 4 HOH H 12 612 93 HOH HOH . FA 4 HOH H 13 613 101 HOH HOH . FA 4 HOH H 14 614 105 HOH HOH . FA 4 HOH H 15 615 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR1 P68 . . . V 3 15.294 -2.647 68.564 1 119.62 ? BR1 P68 501 G 1 HETATM 2 C C8 P68 . . . V 3 15.169 -2.891 66.698 1 60.34 ? C8 P68 501 G 1 HETATM 3 C C7 P68 . . . V 3 14.402 -3.941 66.21 1 60.3 ? C7 P68 501 G 1 HETATM 4 C C6 P68 . . . V 3 14.305 -4.133 64.842 1 60.24 ? C6 P68 501 G 1 HETATM 5 C C9 P68 . . . V 3 15.843 -2.035 65.834 1 60.3 ? C9 P68 501 G 1 HETATM 6 C C10 P68 . . . V 3 15.739 -2.236 64.469 1 60.22 ? C10 P68 501 G 1 HETATM 7 C C5 P68 . . . V 3 14.981 -3.289 63.963 1 60.11 ? C5 P68 501 G 1 HETATM 8 N N2 P68 . . . V 3 14.908 -3.432 62.569 1 59.84 ? N2 P68 501 G 1 HETATM 9 C C4 P68 . . . V 3 14.363 -4.44 61.878 1 59.5 ? C4 P68 501 G 1 HETATM 10 O O P68 . . . V 3 13.861 -5.415 62.408 1 59.53 ? O P68 501 G 1 HETATM 11 N N1 P68 . . . V 3 14.432 -4.318 60.548 1 59.28 ? N1 P68 501 G 1 HETATM 12 C C1 P68 . . . V 3 13.916 -5.229 59.533 1 58.77 ? C1 P68 501 G 1 HETATM 13 C C2 P68 . . . V 3 14.056 -4.562 58.17 1 58.85 ? C2 P68 501 G 1 HETATM 14 C C3 P68 . . . V 3 12.448 -5.6 59.727 1 58.83 ? C3 P68 501 G 1 HETATM 15 C C12 P68 . . . V 3 14.725 -6.489 59.494 1 58.94 ? C12 P68 501 G 1 HETATM 16 C C17 P68 . . . V 3 16.091 -6.481 59.729 1 58.96 ? C17 P68 501 G 1 HETATM 17 C C16 P68 . . . V 3 16.776 -7.69 59.657 1 59.22 ? C16 P68 501 G 1 HETATM 18 C C18 P68 . . . V 3 18.25 -7.767 59.906 1 59.59 ? C18 P68 501 G 1 HETATM 19 N N4 P68 . . . V 3 18.749 -8.905 60.173 1 59.87 ? N4 P68 501 G 1 HETATM 20 O O2 P68 . . . V 3 20.102 -9.153 60.43 1 60.01 ? O2 P68 501 G 1 HETATM 21 C C19 P68 . . . V 3 19.116 -6.55 59.842 1 59.65 ? C19 P68 501 G 1 HETATM 22 C C15 P68 . . . V 3 16.116 -8.877 59.356 1 58.98 ? C15 P68 501 G 1 HETATM 23 C C14 P68 . . . V 3 14.755 -8.875 59.119 1 58.84 ? C14 P68 501 G 1 HETATM 24 C C13 P68 . . . V 3 14.073 -7.673 59.187 1 58.76 ? C13 P68 501 G 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #